FFCP PHASE1:Hg19::chr5:49961727..49961740,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79668 | |EntrezGene=79668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26124 | |HGNC=26124 | ||
|TSSclassifier=strong | |||
|UniProt=D6R914,F5H3X8,B2RB27,Q8N3A8 | |UniProt=D6R914,F5H3X8,B2RB27,Q8N3A8 | ||
|association_with_transcript=0bp_to_ENST00000503750,ENST00000503790,ENST00000505697,ENST00000507812,ENST00000511363,ENST00000514342,NM_001178055,uc003jon.3,uc011cpz.1_5end | |association_with_transcript=0bp_to_ENST00000503750,ENST00000503790,ENST00000505697,ENST00000507812,ENST00000511363,ENST00000514342,NM_001178055,uc003jon.3,uc011cpz.1_5end | ||
|cluster_id=chr5:49961727..49961740,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_8_at_PARP8_5end | |description=CAGE_peak_8_at_PARP8_5end | ||
|id=chr5:49961727..49961740,+ | |id=chr5:49961727..49961740,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.64e-30!140;CL:0000037!8.84e-26!172;CL:0000566!8.84e-26!172;CL:0000791!3.12e-25!18;CL:0000789!3.12e-25!18;CL:0002420!3.12e-25!18;CL:0002419!3.12e-25!18;CL:0000790!3.12e-25!18;CL:0002087!2.41e-24!119;CL:0002032!3.22e-24!165;CL:0000837!3.22e-24!165;CL:0002031!1.00e-23!124;CL:0000988!2.27e-23!182;CL:0000838!7.92e-23!52;CL:0000542!3.18e-22!53;CL:0000051!3.18e-22!53;CL:0000625!1.14e-20!11;CL:0000084!9.23e-17!25;CL:0000827!9.23e-17!25;CL:0002057!5.53e-09!42;CL:0000766!2.36e-08!76;CL:0000624!3.16e-08!6;CL:0000860!4.37e-08!45;CL:0000236!1.15e-07!14;CL:0000898!3.46e-07!3;CL:0000763!3.57e-07!112;CL:0000049!3.57e-07!112;CL:0000945!8.94e-07!24;CL:0000826!8.94e-07!24 | |ontology_enrichment_celltype=CL:0000738!2.64e-30!140;CL:0000037!8.84e-26!172;CL:0000566!8.84e-26!172;CL:0000791!3.12e-25!18;CL:0000789!3.12e-25!18;CL:0002420!3.12e-25!18;CL:0002419!3.12e-25!18;CL:0000790!3.12e-25!18;CL:0002087!2.41e-24!119;CL:0002032!3.22e-24!165;CL:0000837!3.22e-24!165;CL:0002031!1.00e-23!124;CL:0000988!2.27e-23!182;CL:0000838!7.92e-23!52;CL:0000542!3.18e-22!53;CL:0000051!3.18e-22!53;CL:0000625!1.14e-20!11;CL:0000084!9.23e-17!25;CL:0000827!9.23e-17!25;CL:0002057!5.53e-09!42;CL:0000766!2.36e-08!76;CL:0000624!3.16e-08!6;CL:0000860!4.37e-08!45;CL:0000236!1.15e-07!14;CL:0000898!3.46e-07!3;CL:0000763!3.57e-07!112;CL:0000049!3.57e-07!112;CL:0000945!8.94e-07!24;CL:0000826!8.94e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.32e-36;18!CL:0000789;2.32e-36;18!CL:0002419;2.32e-36;18!CL:0000625;4.52e-34;11!CL:0000084;1.85e-25;25!CL:0000542;1.90e-19;53!CL:0000236;1.95e-16;13!CL:0000898;1.65e-15;3!CL:0000767;3.11e-14;3!CL:0000815;8.56e-11;2!CL:0000792;8.56e-11;2!CL:0002677;8.56e-11;2!CL:0000945;1.72e-08;24!CL:0000624;5.66e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.13e-36,18;CL:0000789,3.13e-36,18;CL:0002420,3.13e-36,18;CL:0002419,3.13e-36,18;CL:0000790,3.13e-36,18;CL:0000625,6.30e-34,11;CL:0000838,1.65e-28,52;CL:0000542,6.91e-28,53;CL:0000051,6.91e-28,53;CL:0000084,2.29e-25,25;CL:0000827,2.29e-25,25;CL:0000738,1.33e-15,136;CL:0000898,1.73e-15,3;CL:0000236,2.76e-15,14;CL:0002087,1.60e-14,115;CL:0000767,3.74e-14,3;CL:0002031,1.02e-13,120;CL:0002032,1.31e-13,161;CL:0000837,1.31e-13,161;CL:0000037,8.35e-13,168;CL:0000988,7.28e-12,177;CL:0000815,8.78e-11,2;CL:0000792,8.78e-11,2;CL:0002677,8.78e-11,2;CL:0000945,1.54e-08,24;CL:0000826,1.54e-08,24;CL:0000624,5.80e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.32e-36;18!CL:0000051;1.90e-19;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.85e-09!102;UBERON:0003061!4.85e-09!102;UBERON:0002193!7.24e-09!112 | |ontology_enrichment_uberon=UBERON:0002390!4.85e-09!102;UBERON:0003061!4.85e-09!102;UBERON:0002193!7.24e-09!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.18009283054671,3.0706351847777,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.768482119587302,0.945928919554341,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,1.28371610830437,0,0,0.199463657621632,0,1.45104619314292,0.56738522469114,0.622822248995575,0,0,0.65156653411535,0.605399502633369,1.47311054395026,0.949387162322653,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,4.91524750135918,0,1.28019066769952,1.60158394814405,2.29900975981793,4.62731410949403,2.86216126360609,0,0,0,1.32171328579026,1.12101712596307,0,0.590129310341499,0.393010762749165,0,0.501559486172034,8.14805666583976,8.5220605032252,15.5861382726329,0.668462741311041,6.18672405697158,6.42448294292501,5.68688113906533,0.25618263945135,0.260118695119756,1.97325485524411,1.38175008892924,3.76744011455568,17.4978144531231,24.0786745280742,40.7688542839409,3.96582699441482,15.3288197440768,13.4014703738226,19.9885556695407,4.14135038621326,13.6727525309848,7.60361635558699,10.3896832163663,14.7184602827581,2.49861453104692,6.15620855314444,9.03240796613151,0.604820229674197,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,5.01268954180134,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.18009283054671,3.0706351847777,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.768482119587302,0.945928919554341,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,1.28371610830437,0,0,0.199463657621632,0,1.45104619314292,0.56738522469114,0.622822248995575,0,0,0.65156653411535,0.605399502633369,1.47311054395026,0.949387162322653,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,4.91524750135918,0,1.28019066769952,1.60158394814405,2.29900975981793,4.62731410949403,2.86216126360609,0,0,0,1.32171328579026,1.12101712596307,0,0.590129310341499,0.393010762749165,0,0.501559486172034,8.14805666583976,8.5220605032252,15.5861382726329,0.668462741311041,6.18672405697158,6.42448294292501,5.68688113906533,0.25618263945135,0.260118695119756,1.97325485524411,1.38175008892924,3.76744011455568,17.4978144531231,24.0786745280742,40.7688542839409,3.96582699441482,15.3288197440768,13.4014703738226,19.9885556695407,4.14135038621326,13.6727525309848,7.60361635558699,10.3896832163663,14.7184602827581,2.49861453104692,6.15620855314444,9.03240796613151,0.604820229674197,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,5.01268954180134,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p8@PARP8 | |short_description=p8@PARP8 | ||
}} | }} |
Latest revision as of 01:47, 18 September 2015
Short description: | p8@PARP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PARP8_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000503750, ENST00000503790, ENST00000505697, ENST00000507812, ENST00000511363, ENST00000514342, NM_001178055, uc003jon.3, uc011cpz.1_5end |
EntrezGene: | PARP8 |
HGNC: | 26124 |
UniProt: | D6R914F5H3X8B2RB27Q8N3A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.13e-36 | 18 |
alpha-beta T cell | 3.13e-36 | 18 |
immature T cell | 3.13e-36 | 18 |
mature T cell | 3.13e-36 | 18 |
immature alpha-beta T cell | 3.13e-36 | 18 |
CD8-positive, alpha-beta T cell | 6.30e-34 | 11 |
lymphoid lineage restricted progenitor cell | 1.65e-28 | 52 |
lymphocyte | 6.91e-28 | 53 |
common lymphoid progenitor | 6.91e-28 | 53 |
T cell | 2.29e-25 | 25 |
pro-T cell | 2.29e-25 | 25 |
leukocyte | 1.33e-15 | 136 |
naive T cell | 1.73e-15 | 3 |
B cell | 2.76e-15 | 14 |
nongranular leukocyte | 1.60e-14 | 115 |
basophil | 3.74e-14 | 3 |
hematopoietic lineage restricted progenitor cell | 1.02e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.31e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-13 | 161 |
hematopoietic stem cell | 8.35e-13 | 168 |
hematopoietic cell | 7.28e-12 | 177 |
regulatory T cell | 8.78e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.78e-11 | 2 |
naive regulatory T cell | 8.78e-11 | 2 |
lymphocyte of B lineage | 1.54e-08 | 24 |
pro-B cell | 1.54e-08 | 24 |
CD4-positive, alpha-beta T cell | 5.80e-08 | 6 |