FFCP PHASE1:Hg19::chr11:45826659..45826742,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55343 | |EntrezGene=55343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20197 | |HGNC=20197 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPI4,Q96K20 | |UniProt=E9PPI4,Q96K20 | ||
|association_with_transcript=0bp_to_ENST00000530471,ENST00000540685_5end | |association_with_transcript=0bp_to_ENST00000530471,ENST00000540685_5end | ||
|cluster_id=chr11:45826659..45826742,+ | |||
|description=CAGE_peak_1_at_SLC35C1_5end | |description=CAGE_peak_1_at_SLC35C1_5end | ||
|id=chr11:45826659..45826742,+ | |id=chr11:45826659..45826742,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.54e-21!180;CL:0000220!3.04e-18!246;CL:0002321!3.85e-18!248;CL:0000183!4.88e-17!59;CL:0000222!1.12e-15!119;CL:0000192!3.71e-15!42;CL:0000514!3.71e-15!42;CL:0000187!5.48e-15!54;CL:0000680!8.71e-15!57;CL:0000056!8.71e-15!57;CL:0000355!8.71e-15!57;CL:0000393!2.23e-13!60;CL:0000211!2.23e-13!60;CL:0000359!1.18e-11!32;CL:0002371!1.11e-10!591;CL:0000144!1.18e-09!625 | |ontology_enrichment_celltype=CL:0000055!8.54e-21!180;CL:0000220!3.04e-18!246;CL:0002321!3.85e-18!248;CL:0000183!4.88e-17!59;CL:0000222!1.12e-15!119;CL:0000192!3.71e-15!42;CL:0000514!3.71e-15!42;CL:0000187!5.48e-15!54;CL:0000680!8.71e-15!57;CL:0000056!8.71e-15!57;CL:0000355!8.71e-15!57;CL:0000393!2.23e-13!60;CL:0000211!2.23e-13!60;CL:0000359!1.18e-11!32;CL:0002371!1.11e-10!591;CL:0000144!1.18e-09!625 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.01e-11;43!CL:0000359;3.45e-11;32!CL:0000187;1.58e-08;55!CL:0000393;3.29e-07;61!CL:0000211;3.29e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.86e-18,250;CL:0000222,5.83e-16,121;CL:0000192,1.84e-15,43;CL:0000514,1.84e-15,43;CL:0000187,2.70e-15,55;CL:0000680,4.30e-15,58;CL:0000056,4.30e-15,58;CL:0000355,4.30e-15,58;CL:0000393,1.12e-13,61;CL:0000211,1.12e-13,61;CL:0000359,1.18e-11,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.01e-11;43!CL:0000355;2.26e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.49e-21!312;UBERON:0000483!1.43e-20!309;UBERON:0003914!1.79e-20!118;UBERON:0005256!4.16e-20!143;UBERON:0000475!5.19e-19!365;UBERON:0000490!4.47e-16!138;UBERON:0004290!3.45e-15!70;UBERON:0002100!4.13e-15!216;UBERON:0000486!7.70e-15!82;UBERON:0002049!1.01e-14!79;UBERON:0007798!1.01e-14!79;UBERON:0000914!2.02e-14!83;UBERON:0002329!2.02e-14!83;UBERON:0003077!2.02e-14!83;UBERON:0003059!2.02e-14!83;UBERON:0007282!2.02e-14!83;UBERON:0009618!2.02e-14!83;UBERON:0007285!2.02e-14!83;UBERON:0000025!2.98e-14!194;UBERON:0004111!3.01e-14!241;UBERON:0001134!4.61e-14!61;UBERON:0002036!4.61e-14!61;UBERON:0003082!4.61e-14!61;UBERON:0000055!5.47e-14!69;UBERON:0004872!1.66e-13!84;UBERON:0001981!3.32e-13!60;UBERON:0007500!3.32e-13!60;UBERON:0004537!3.32e-13!60;UBERON:0006965!3.32e-13!60;UBERON:0002385!4.73e-13!63;UBERON:0001015!4.73e-13!63;UBERON:0000383!4.73e-13!63;UBERON:0001637!1.45e-11!42;UBERON:0003509!1.45e-11!42;UBERON:0004572!1.45e-11!42;UBERON:0000481!2.25e-11!347;UBERON:0000477!1.31e-10!286;UBERON:0004573!2.62e-09!33;UBERON:0004571!2.62e-09!33;UBERON:0004535!5.42e-09!110;UBERON:0001009!1.56e-08!113;UBERON:0009569!2.73e-08!113;UBERON:0003104!4.19e-08!238;UBERON:0009142!4.19e-08!238;UBERON:0002417!1.02e-07!61;UBERON:0000916!1.02e-07!61 | |ontology_enrichment_uberon=UBERON:0000119!1.49e-21!312;UBERON:0000483!1.43e-20!309;UBERON:0003914!1.79e-20!118;UBERON:0005256!4.16e-20!143;UBERON:0000475!5.19e-19!365;UBERON:0000490!4.47e-16!138;UBERON:0004290!3.45e-15!70;UBERON:0002100!4.13e-15!216;UBERON:0000486!7.70e-15!82;UBERON:0002049!1.01e-14!79;UBERON:0007798!1.01e-14!79;UBERON:0000914!2.02e-14!83;UBERON:0002329!2.02e-14!83;UBERON:0003077!2.02e-14!83;UBERON:0003059!2.02e-14!83;UBERON:0007282!2.02e-14!83;UBERON:0009618!2.02e-14!83;UBERON:0007285!2.02e-14!83;UBERON:0000025!2.98e-14!194;UBERON:0004111!3.01e-14!241;UBERON:0001134!4.61e-14!61;UBERON:0002036!4.61e-14!61;UBERON:0003082!4.61e-14!61;UBERON:0000055!5.47e-14!69;UBERON:0004872!1.66e-13!84;UBERON:0001981!3.32e-13!60;UBERON:0007500!3.32e-13!60;UBERON:0004537!3.32e-13!60;UBERON:0006965!3.32e-13!60;UBERON:0002385!4.73e-13!63;UBERON:0001015!4.73e-13!63;UBERON:0000383!4.73e-13!63;UBERON:0001637!1.45e-11!42;UBERON:0003509!1.45e-11!42;UBERON:0004572!1.45e-11!42;UBERON:0000481!2.25e-11!347;UBERON:0000477!1.31e-10!286;UBERON:0004573!2.62e-09!33;UBERON:0004571!2.62e-09!33;UBERON:0004535!5.42e-09!110;UBERON:0001009!1.56e-08!113;UBERON:0009569!2.73e-08!113;UBERON:0003104!4.19e-08!238;UBERON:0009142!4.19e-08!238;UBERON:0002417!1.02e-07!61;UBERON:0000916!1.02e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.59e-09;33!UBERON:0004571;8.59e-09;33!UBERON:0003914;2.58e-08;74!UBERON:0001637;3.29e-08;42!UBERON:0003509;3.29e-08;42!UBERON:0004572;3.29e-08;42!UBERON:0007500;2.18e-07;56!UBERON:0001981;2.18e-07;56!UBERON:0004537;2.18e-07;56 | |||
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16027075229 | ||
|short_description=p1@SLC35C1 | |short_description=p1@SLC35C1 | ||
}} | }} |
Latest revision as of 01:22, 18 September 2015
Short description: | p1@SLC35C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC35C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530471, ENST00000540685_5end |
EntrezGene: | SLC35C1 |
HGNC: | 20197 |
UniProt: | E9PPI4Q96K20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.86e-18 | 250 |
mesodermal cell | 5.83e-16 | 121 |
smooth muscle cell | 1.84e-15 | 43 |
smooth muscle myoblast | 1.84e-15 | 43 |
muscle cell | 2.70e-15 | 55 |
muscle precursor cell | 4.30e-15 | 58 |
myoblast | 4.30e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.30e-15 | 58 |
electrically responsive cell | 1.12e-13 | 61 |
electrically active cell | 1.12e-13 | 61 |
vascular associated smooth muscle cell | 1.18e-11 | 32 |