FFCP PHASE1:Hg19::chr2:16847084..16847110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81553 | |EntrezGene=81553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25373 | |HGNC=25373 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0Q0 | |UniProt=Q9H0Q0 | ||
|association_with_transcript=0bp_to_ENST00000381323,ENST00000406434,uc002rck.1_5end | |association_with_transcript=0bp_to_ENST00000381323,ENST00000406434,uc002rck.1_5end | ||
|cluster_id=chr2:16847084..16847110,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_FAM49A_5end | |description=CAGE_peak_1_at_FAM49A_5end | ||
|id=chr2:16847084..16847110,- | |id=chr2:16847084..16847110,- | ||
|ontology_enrichment_celltype=CL:0000738!3.67e-31!140;CL:0000766!9.65e-28!76;CL:0002057!8.68e-27!42;CL:0000557!5.81e-24!71;CL:0002009!5.30e-23!65;CL:0000037!6.75e-23!172;CL:0000566!6.75e-23!172;CL:0002087!7.66e-23!119;CL:0000860!9.32e-23!45;CL:0000988!2.00e-22!182;CL:0002031!7.48e-22!124;CL:0002194!7.67e-22!63;CL:0000576!7.67e-22!63;CL:0000040!7.67e-22!63;CL:0000559!7.67e-22!63;CL:0002032!2.08e-21!165;CL:0000837!2.08e-21!165;CL:0000839!7.13e-21!70;CL:0000763!3.13e-19!112;CL:0000049!3.13e-19!112;CL:0002393!3.65e-07!9;CL:0002397!3.65e-07!9 | |ontology_enrichment_celltype=CL:0000738!3.67e-31!140;CL:0000766!9.65e-28!76;CL:0002057!8.68e-27!42;CL:0000557!5.81e-24!71;CL:0002009!5.30e-23!65;CL:0000037!6.75e-23!172;CL:0000566!6.75e-23!172;CL:0002087!7.66e-23!119;CL:0000860!9.32e-23!45;CL:0000988!2.00e-22!182;CL:0002031!7.48e-22!124;CL:0002194!7.67e-22!63;CL:0000576!7.67e-22!63;CL:0000040!7.67e-22!63;CL:0000559!7.67e-22!63;CL:0002032!2.08e-21!165;CL:0000837!2.08e-21!165;CL:0000839!7.13e-21!70;CL:0000763!3.13e-19!112;CL:0000049!3.13e-19!112;CL:0002393!3.65e-07!9;CL:0002397!3.65e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.99e-20;33!CL:0002057;8.99e-20;33!CL:0000473;1.36e-17;39!CL:0000234;1.36e-17;39!CL:0000576;3.22e-17;48!CL:0000766;5.87e-15;69!CL:0002087;4.64e-09;104!CL:0000738;2.81e-08;136!CL:0000763;5.66e-07;100!CL:0000094;8.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.69e-35,136;CL:0000766,9.54e-33,72;CL:0000557,1.23e-28,67;CL:0000473,2.01e-28,48;CL:0000234,2.01e-28,48;CL:0002009,8.67e-28,61;CL:0000860,1.49e-27,42;CL:0002057,1.49e-27,42;CL:0002194,1.55e-26,59;CL:0000576,1.55e-26,59;CL:0000040,1.55e-26,59;CL:0000559,1.55e-26,59;CL:0002087,1.80e-26,115;CL:0000037,1.26e-25,168;CL:0002031,2.17e-25,120;CL:0000839,2.99e-25,66;CL:0000988,5.52e-25,177;CL:0002032,6.15e-24,161;CL:0000837,6.15e-24,161;CL:0000763,8.01e-22,108;CL:0000049,8.01e-22,108;CL:0002393,2.46e-07,9;CL:0002397,2.46e-07,9;CL:0000094,8.23e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.72e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.28e-27!112;UBERON:0002390!1.75e-27!102;UBERON:0003061!1.75e-27!102;UBERON:0007023!1.48e-25!115;UBERON:0002371!3.03e-21!80;UBERON:0001474!8.96e-19!86;UBERON:0002616!5.90e-18!59;UBERON:0001049!1.33e-17!57;UBERON:0005068!1.33e-17!57;UBERON:0006241!1.33e-17!57;UBERON:0007135!1.33e-17!57;UBERON:0001017!2.63e-17!82;UBERON:0005743!1.82e-16!86;UBERON:0002405!1.12e-15!115;UBERON:0000955!1.20e-15!69;UBERON:0006238!1.20e-15!69;UBERON:0003080!1.46e-15!42;UBERON:0004765!2.36e-15!101;UBERON:0001434!2.36e-15!101;UBERON:0002780!2.51e-15!41;UBERON:0001890!2.51e-15!41;UBERON:0006240!2.51e-15!41;UBERON:0000073!5.63e-14!94;UBERON:0001016!5.63e-14!94;UBERON:0003081!1.27e-13!216;UBERON:0001893!1.86e-13!34;UBERON:0002020!3.68e-13!34;UBERON:0003528!3.68e-13!34;UBERON:0001869!3.85e-13!32;UBERON:0002791!5.75e-13!33;UBERON:0002346!4.21e-12!90;UBERON:0002619!1.05e-11!22;UBERON:0003075!2.87e-11!86;UBERON:0007284!2.87e-11!86;UBERON:0001950!6.72e-11!20;UBERON:0000956!2.24e-10!25;UBERON:0000203!2.24e-10!25;UBERON:0003056!2.36e-10!61;UBERON:0000479!5.76e-09!787;UBERON:0000153!4.03e-07!129;UBERON:0007811!4.03e-07!129;UBERON:0000033!9.53e-07!123 | |ontology_enrichment_uberon=UBERON:0002193!1.28e-27!112;UBERON:0002390!1.75e-27!102;UBERON:0003061!1.75e-27!102;UBERON:0007023!1.48e-25!115;UBERON:0002371!3.03e-21!80;UBERON:0001474!8.96e-19!86;UBERON:0002616!5.90e-18!59;UBERON:0001049!1.33e-17!57;UBERON:0005068!1.33e-17!57;UBERON:0006241!1.33e-17!57;UBERON:0007135!1.33e-17!57;UBERON:0001017!2.63e-17!82;UBERON:0005743!1.82e-16!86;UBERON:0002405!1.12e-15!115;UBERON:0000955!1.20e-15!69;UBERON:0006238!1.20e-15!69;UBERON:0003080!1.46e-15!42;UBERON:0004765!2.36e-15!101;UBERON:0001434!2.36e-15!101;UBERON:0002780!2.51e-15!41;UBERON:0001890!2.51e-15!41;UBERON:0006240!2.51e-15!41;UBERON:0000073!5.63e-14!94;UBERON:0001016!5.63e-14!94;UBERON:0003081!1.27e-13!216;UBERON:0001893!1.86e-13!34;UBERON:0002020!3.68e-13!34;UBERON:0003528!3.68e-13!34;UBERON:0001869!3.85e-13!32;UBERON:0002791!5.75e-13!33;UBERON:0002346!4.21e-12!90;UBERON:0002619!1.05e-11!22;UBERON:0003075!2.87e-11!86;UBERON:0007284!2.87e-11!86;UBERON:0001950!6.72e-11!20;UBERON:0000956!2.24e-10!25;UBERON:0000203!2.24e-10!25;UBERON:0003056!2.36e-10!61;UBERON:0000479!5.76e-09!787;UBERON:0000153!4.03e-07!129;UBERON:0007811!4.03e-07!129;UBERON:0000033!9.53e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.75e-12;32!UBERON:0002619;5.12e-12;22!UBERON:0001893;6.60e-12;34!UBERON:0002791;8.06e-12;32!UBERON:0003528;9.88e-12;34!UBERON:0002020;9.88e-12;34!UBERON:0002780;1.64e-11;41!UBERON:0001890;1.64e-11;41!UBERON:0001950;3.46e-11;20!UBERON:0000956;1.29e-10;25!UBERON:0000203;1.29e-10;25!UBERON:0000073;4.04e-10;53!UBERON:0002616;4.04e-10;53!UBERON:0001017;6.59e-08;75!UBERON:0000955;1.77e-07;68!UBERON:0007023;2.11e-07;114 | |||
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| ||
|short_description=p1@FAM49A | |short_description=p1@FAM49A | ||
}} | }} |
Latest revision as of 01:15, 18 September 2015
Short description: | p1@FAM49A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM49A_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000381323, ENST00000406434, uc002rck.1_5end |
EntrezGene: | FAM49A |
HGNC: | 25373 |
UniProt: | Q9H0Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.69e-35 | 136 |
myeloid leukocyte | 9.54e-33 | 72 |
granulocyte monocyte progenitor cell | 1.23e-28 | 67 |
defensive cell | 2.01e-28 | 48 |
phagocyte | 2.01e-28 | 48 |
macrophage dendritic cell progenitor | 8.67e-28 | 61 |
classical monocyte | 1.49e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-27 | 42 |
monopoietic cell | 1.55e-26 | 59 |
monocyte | 1.55e-26 | 59 |
monoblast | 1.55e-26 | 59 |
promonocyte | 1.55e-26 | 59 |
nongranular leukocyte | 1.80e-26 | 115 |
hematopoietic stem cell | 1.26e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 2.17e-25 | 120 |
myeloid lineage restricted progenitor cell | 2.99e-25 | 66 |
hematopoietic cell | 5.52e-25 | 177 |
hematopoietic oligopotent progenitor cell | 6.15e-24 | 161 |
hematopoietic multipotent progenitor cell | 6.15e-24 | 161 |
myeloid cell | 8.01e-22 | 108 |
common myeloid progenitor | 8.01e-22 | 108 |
intermediate monocyte | 2.46e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.46e-07 | 9 |
granulocyte | 8.23e-07 | 8 |