FFCP PHASE1:Hg19::chr2:66662281..66662308,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:66662281..66662308,+ to FFCP PHASE1:Hg19::chr2:66662281..66662308,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4211 | |EntrezGene=4211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7000 | |HGNC=7000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491706_5end | |||
|cluster_id=chr2:66662281..66662308,+ | |||
|coexpression_cluster_id=C1912 | |||
|description=CAGE_peak_1_at_MEIS1_5end | |||
|id=chr2:66662281..66662308,+ | |||
|ontology_enrichment_celltype=CL:0000187!2.96e-11!54;CL:0000192!4.90e-11!42;CL:0000514!4.90e-11!42;CL:0000680!5.24e-11!57;CL:0000056!5.24e-11!57;CL:0000355!5.24e-11!57;CL:0000183!2.13e-10!59;CL:0000393!3.67e-09!60;CL:0000211!3.67e-09!60;CL:0000055!6.83e-08!180;CL:0000359!2.11e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.45e-09;43!CL:0000359;2.95e-07;32!CL:0000187;5.82e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.67e-12,43;CL:0000514,7.67e-12,43;CL:0000187,8.09e-12,55;CL:0000680,1.46e-11,58;CL:0000056,1.46e-11,58;CL:0000355,1.46e-11,58;CL:0000393,5.53e-10,61;CL:0000211,5.53e-10,61;CL:0000359,1.45e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;7.45e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.84e-16!365;UBERON:0000481!9.04e-16!347;UBERON:0000468!2.95e-14!659;UBERON:0004111!2.47e-12!241;UBERON:0002385!1.57e-11!63;UBERON:0001015!1.57e-11!63;UBERON:0000383!1.57e-11!63;UBERON:0004290!1.67e-11!70;UBERON:0001134!5.15e-11!61;UBERON:0002036!5.15e-11!61;UBERON:0003082!5.15e-11!61;UBERON:0004872!1.01e-10!84;UBERON:0000477!1.20e-10!286;UBERON:0007023!1.30e-10!115;UBERON:0000483!1.71e-10!309;UBERON:0000025!2.62e-10!194;UBERON:0000486!4.64e-10!82;UBERON:0000480!5.84e-10!626;UBERON:0000467!5.98e-10!625;UBERON:0000119!1.23e-09!312;UBERON:0000914!3.17e-09!83;UBERON:0002329!3.17e-09!83;UBERON:0003077!3.17e-09!83;UBERON:0003059!3.17e-09!83;UBERON:0007282!3.17e-09!83;UBERON:0009618!3.17e-09!83;UBERON:0007285!3.17e-09!83;UBERON:0002100!4.97e-09!216;UBERON:0003104!5.86e-09!238;UBERON:0009142!5.86e-09!238;UBERON:0000922!2.54e-08!612;UBERON:0002050!3.47e-08!605;UBERON:0005423!3.47e-08!605;UBERON:0000064!5.18e-08!219;UBERON:0000923!7.09e-08!604;UBERON:0005291!7.09e-08!604;UBERON:0006598!7.09e-08!604;UBERON:0002532!7.09e-08!604;UBERON:0001637!9.66e-08!42;UBERON:0003509!9.66e-08!42;UBERON:0004572!9.66e-08!42;UBERON:0001981!1.94e-07!60;UBERON:0007500!1.94e-07!60;UBERON:0004537!1.94e-07!60;UBERON:0006965!1.94e-07!60;UBERON:0004573!3.60e-07!33;UBERON:0004571!3.60e-07!33;UBERON:0005256!4.26e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;9.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.89e-12,73;UBERON:0002385,4.15e-12,64;UBERON:0001015,4.15e-12,64;UBERON:0000383,4.15e-12,64;UBERON:0002329,5.08e-12,71;UBERON:0003059,5.08e-12,71;UBERON:0007282,5.08e-12,71;UBERON:0004290,5.08e-12,71;UBERON:0009618,5.08e-12,71;UBERON:0003077,5.99e-12,72;UBERON:0007285,5.99e-12,72;UBERON:0001134,1.43e-11,62;UBERON:0002036,1.43e-11,62;UBERON:0003082,1.43e-11,62;UBERON:0007503,5.61e-11,78;UBERON:0004111,9.52e-11,240;UBERON:0004872,2.26e-10,83;UBERON:0000486,3.02e-10,83;UBERON:0000483,3.05e-10,306;UBERON:0007023,5.35e-10,114;UBERON:0002050,9.26e-10,564;UBERON:0000923,1.17e-09,560;UBERON:0010316,1.17e-09,560;UBERON:0005291,1.17e-09,560;UBERON:0006598,1.17e-09,560;UBERON:0010317,1.17e-09,560;UBERON:0002532,1.17e-09,560;UBERON:0000119,1.48e-09,309;UBERON:0005256,2.00e-09,122;UBERON:0000025,6.37e-09,192;UBERON:0005423,2.08e-08,581;UBERON:0003104,2.15e-08,160;UBERON:0009142,2.15e-08,160;UBERON:0002346,3.98e-08,86;UBERON:0002100,6.35e-08,199;UBERON:0011216,6.39e-08,223;UBERON:0000922,7.13e-08,592;UBERON:0001637,1.27e-07,42;UBERON:0003509,1.27e-07,42;UBERON:0004572,1.27e-07,42;UBERON:0000479,2.59e-07,773;UBERON:0004573,3.28e-07,33;UBERON:0004571,3.28e-07,33;UBERON:0010314,3.73e-07,132;UBERON:0007500,3.92e-07,59;UBERON:0001981,3.92e-07,59;UBERON:0004537,3.92e-07,59;UBERON:0006965,3.92e-07,59;UBERON:0003075,6.45e-07,82;UBERON:0007284,6.45e-07,82;UBERON:0001135,9.55e-07,15 | |||
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| ||
|short_description=p1@MEIS1 | |||
}} | }} |
Latest revision as of 01:14, 18 September 2015
Short description: | p1@MEIS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEIS1_5end |
Coexpression cluster: | C1912_uterus_cervix_rectum_cerebellum_neuroepithelioma_sacrococcigeal_neuroectodermal |
Association with transcript: | 0bp_to_ENST00000491706_5end |
EntrezGene: | MEIS1 |
HGNC: | 7000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.67e-12 | 43 |
smooth muscle myoblast | 7.67e-12 | 43 |
muscle cell | 8.09e-12 | 55 |
muscle precursor cell | 1.46e-11 | 58 |
myoblast | 1.46e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-11 | 58 |
electrically responsive cell | 5.53e-10 | 61 |
electrically active cell | 5.53e-10 | 61 |
vascular associated smooth muscle cell | 1.45e-07 | 32 |