FFCP PHASE1:Hg19::chr6:31926208..31926226,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:31926208..31926226,-
|short_description=p2@RDBP
|description=CAGE_peak_2_at_RDBP_5end
|association_with_transcript=4bp_to_uc003nyl.1_5end
|EntrezGene=7936...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7936 | |EntrezGene=7936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13974 | |HGNC=13974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc003nyl.1_5end | |||
|cluster_id=chr6:31926208..31926226,- | |||
|description=CAGE_peak_2_at_RDBP_5end | |||
|id=chr6:31926208..31926226,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.06e-13;1!CL:0002625;5.06e-13;1!CL:0000216;5.06e-13;1!CL:0000097;2.71e-10;5!CL:0002363;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.95e-13,1;CL:0002625,2.95e-13,1;CL:0000216,2.95e-13,1;CL:0000097,4.12e-10,5;CL:0002028,4.12e-10,5;CL:0002363,5.28e-07,2;CL:0000008,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.06e-13;1!CL:0000008;3.81e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;3.81e-07;2!DOID:4236;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.74e-07,2;DOID:4236,2.74e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;5.06e-13;1!UBERON:0001136;5.06e-13;1!UBERON:0001343;5.06e-13;1!UBERON:0002082;5.06e-13;1!UBERON:0004910;5.06e-13;1!UBERON:0004813;5.06e-13;1!UBERON:0003566;3.81e-07;2!UBERON:0004909;3.81e-07;2!UBERON:0001777;3.81e-07;2!UBERON:0000473;9.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.95e-13,1;UBERON:0001343,2.95e-13,1;UBERON:0004910,2.95e-13,1;UBERON:0005154,2.95e-13,1;UBERON:0005295,2.95e-13,1;UBERON:0004813,2.95e-13,1;UBERON:0005297,2.95e-13,1;UBERON:0005294,2.95e-13,1;UBERON:0010141,2.95e-13,1;UBERON:0005891,2.95e-13,1;UBERON:0002084,5.38e-13,1;UBERON:0002082,5.38e-13,1;UBERON:0010226,5.38e-13,1;UBERON:0004909,2.91e-07,2;UBERON:0003566,5.28e-07,2;UBERON:0001777,5.28e-07,2;UBERON:0000473,7.44e-07,8 | |||
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| ||
|short_description=p2@RDBP | |||
}} | }} |
Latest revision as of 01:11, 18 September 2015
Short description: | p2@RDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RDBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_uc003nyl.1_5end |
EntrezGene: | RDBP |
HGNC: | 13974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.95e-13 | 1 |
seminiferous tubule epithelial cell | 2.95e-13 | 1 |
Sertoli cell | 2.95e-13 | 1 |
mast cell | 4.12e-10 | 5 |
basophil mast progenitor cell | 4.12e-10 | 5 |
keratocyte | 5.28e-07 | 2 |
migratory cranial neural crest cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.95e-13 | 1 |
seminiferous tubule of testis | 2.95e-13 | 1 |
epithelium of male gonad | 2.95e-13 | 1 |
epithelial cord | 2.95e-13 | 1 |
sex cord | 2.95e-13 | 1 |
seminiferous tubule epithelium | 2.95e-13 | 1 |
testis sex cord | 2.95e-13 | 1 |
genital ridge | 2.95e-13 | 1 |
primitive sex cord of indifferent gonad | 2.95e-13 | 1 |
coelomic epithelium | 2.95e-13 | 1 |
heart left ventricle | 5.38e-13 | 1 |
cardiac ventricle | 5.38e-13 | 1 |
future cardiac ventricle | 5.38e-13 | 1 |
epithelium of gonad | 2.91e-07 | 2 |
head connective tissue | 5.28e-07 | 2 |
substantia propria of cornea | 5.28e-07 | 2 |
testis | 7.44e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.74e-07 | 2 |
carcinosarcoma | 2.74e-07 | 2 |