FFCP PHASE1:Hg19::chr1:160160357..160160401,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=844 | |EntrezGene=844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1512 | |HGNC=1512 | ||
|TSSclassifier=strong | |||
|UniProt=P31415 | |UniProt=P31415 | ||
|association_with_transcript=11bp_to_ENST00000368078_5end | |association_with_transcript=11bp_to_ENST00000368078_5end | ||
|cluster_id=chr1:160160357..160160401,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_1_at_CASQ1_5end | |description=CAGE_peak_1_at_CASQ1_5end | ||
|id=chr1:160160357..160160401,+ | |id=chr1:160160357..160160401,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.36e-13!115 | |ontology_enrichment_uberon=UBERON:0007023!3.36e-13!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;8.28e-11;2!UBERON:0001630;8.28e-11;2!UBERON:0000341;1.39e-10;2!UBERON:0003127;3.86e-10;2!UBERON:0001829;4.52e-10;2!UBERON:0001723;1.82e-07;3!UBERON:0001033;1.82e-07;3!UBERON:0001044;2.75e-07;6!UBERON:0003293;2.75e-07;6!UBERON:0003294;2.75e-07;6!UBERON:0010047;2.75e-07;6!UBERON:0003408;2.75e-07;6!UBERON:0000167;2.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,8.28e-11,2;UBERON:0001630,8.28e-11,2;UBERON:0000341,1.39e-10,2;UBERON:0003127,4.04e-10,2;UBERON:0001829,4.63e-10,2;UBERON:0007023,6.41e-10,114;UBERON:0003103,2.99e-08,68;UBERON:0001723,1.82e-07,3;UBERON:0001033,1.82e-07,3;UBERON:0010056,1.82e-07,3;UBERON:0001044,2.78e-07,6;UBERON:0003293,2.78e-07,6;UBERON:0003294,2.78e-07,6;UBERON:0010047,2.78e-07,6;UBERON:0000167,2.78e-07,6;UBERON:0000166,5.38e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,28.3313505668419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.2969726448353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,1.09921046358244,0,0,0,0,0,0,0,5.32002573297536,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,61.5860805681739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,19.6598835455759,0,0.368738337083406,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.633322905892992,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9830622409318,0,0,0,0,36.2296910615819,0,0,0,0,0,0,0.597743964753209,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884634079449797,0.591095237907095,0,0,0,0,0,0,0.0897576444097721,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,645.272428428226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9905404867873,0,0,0,0,17.0700669019618,0,25.9877851897612,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,4.12488763221031,0,1.79711100449092,0.858452096273142,5.35611497860494,1.34366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,128.769992826825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,12.6099286377152,415.824967490229,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0.470958557103084,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,6.02318302348389,0,0,0,0,0,0,0,0,0,386.515015801173,820.994466429407,419.852824144428,98.1136205979462,0,0,0,0,0.219881033490858,0,0,0,0.470317296361523,0,0,0,0,7.1851473689178,0,0,0,0,0,0,0,0,27.5237570042724,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0.378893491091197,0,0,0,354.181643937529,67.3722341042385,0,0.0620747142958579,0,4.58259539602787,28.7006408320671,368.812170937452,732.379264322501,22.5629377598868,5.02055437748735,69.8586748746628,0,0,0,0,11.7320471201727,0,0.406896178315738,0,19.3222841847385,0 | |phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,28.3313505668419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.2969726448353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,1.09921046358244,0,0,0,0,0,0,0,5.32002573297536,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,61.5860805681739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,19.6598835455759,0,0.368738337083406,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.633322905892992,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9830622409318,0,0,0,0,36.2296910615819,0,0,0,0,0,0,0.597743964753209,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884634079449797,0.591095237907095,0,0,0,0,0,0,0.0897576444097721,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,645.272428428226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.9905404867873,0,0,0,0,17.0700669019618,0,25.9877851897612,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,4.12488763221031,0,1.79711100449092,0.858452096273142,5.35611497860494,1.34366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,128.769992826825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,12.6099286377152,415.824967490229,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0.470958557103084,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,6.02318302348389,0,0,0,0,0,0,0,0,0,386.515015801173,820.994466429407,419.852824144428,98.1136205979462,0,0,0,0,0.219881033490858,0,0,0,0.470317296361523,0,0,0,0,7.1851473689178,0,0,0,0,0,0,0,0,27.5237570042724,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0.378893491091197,0,0,0,354.181643937529,67.3722341042385,0,0.0620747142958579,0,4.58259539602787,28.7006408320671,368.812170937452,732.379264322501,22.5629377598868,5.02055437748735,69.8586748746628,0,0,0,0,11.7320471201727,0,0.406896178315738,0,19.3222841847385,0 | ||
|short_description=p1@CASQ1 | |short_description=p1@CASQ1 | ||
}} | }} |
Latest revision as of 01:11, 18 September 2015
Short description: | p1@CASQ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CASQ1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 11bp_to_ENST00000368078_5end |
EntrezGene: | CASQ1 |
HGNC: | 1512 |
UniProt: | P31415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle structure | 8.28e-11 | 2 |
muscle organ | 8.28e-11 | 2 |
throat | 1.39e-10 | 2 |
open tracheal system trachea | 4.04e-10 | 2 |
major salivary gland | 4.63e-10 | 2 |
adult organism | 6.41e-10 | 114 |
compound organ | 2.99e-08 | 68 |
tongue | 1.82e-07 | 3 |
gustatory system | 1.82e-07 | 3 |
future tongue | 1.82e-07 | 3 |
saliva-secreting gland | 2.78e-07 | 6 |
gland of oral region | 2.78e-07 | 6 |
gland of foregut | 2.78e-07 | 6 |
oral gland | 2.78e-07 | 6 |
oral cavity | 2.78e-07 | 6 |
oral opening | 5.38e-07 | 22 |