FFCP PHASE1:Hg19::chr1:160147176..160147200,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=480 | |EntrezGene=480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14073 | |HGNC=14073 | ||
|TSSclassifier=strong | |||
|UniProt=Q13733 | |UniProt=Q13733 | ||
|association_with_transcript=0bp_to_ENST00000466526,ENST00000470705,NM_001001734,uc001fvh.2_5end | |association_with_transcript=0bp_to_ENST00000466526,ENST00000470705,NM_001001734,uc001fvh.2_5end | ||
|cluster_id=chr1:160147176..160147200,+ | |||
|coexpression_cluster_id=C64 | |coexpression_cluster_id=C64 | ||
|description=CAGE_peak_1_at_ATP1A4_5end | |description=CAGE_peak_1_at_ATP1A4_5end | ||
|id=chr1:160147176..160147200,+ | |id=chr1:160147176..160147200,+ | ||
|ontology_enrichment_celltype=CL:0000097;1.26e-15;5!CL:0000244;2.30e-10;4!CL:0000731;2.30e-10;4!CL:0000453;2.13e-09;5!CL:0000163;1.06e-08;9 | |ontology_enrichment_celltype=CL:0002274!4.24e-10!5;CL:0000457!4.24e-10!5;CL:0002191!4.24e-10!5;CL:0000097!4.24e-10!5;CL:0000831!4.24e-10!5;CL:0002028!4.24e-10!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000097;1.26e-15;5!CL:0000244;2.30e-10;4!CL:0000731;2.30e-10;4!CL:0000453;2.13e-09;5!CL:0000163;1.06e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.26e-15,5;CL:0002028,1.26e-15,5;CL:0000244,2.80e-10,4;CL:0000731,2.80e-10,4;CL:0000453,2.13e-09,5;CL:0000163,1.06e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.08e-10;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000365;2.20e-08;5!UBERON:0006947;3.27e-07;3!UBERON:0004054;3.27e-07;3!UBERON:0005910;4.67e-07;6!UBERON:0002106;8.94e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.93e-10!115;UBERON:0000478!6.12e-07!24;UBERON:0005631!7.58e-07!14;UBERON:0000158!7.58e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.20e-08;5!UBERON:0006947;3.27e-07;3!UBERON:0004054;3.27e-07;3!UBERON:0005910;4.67e-07;6!UBERON:0002106;8.94e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.57e-08,5;UBERON:0006947,3.17e-07,3;UBERON:0004054,3.17e-07,3;UBERON:0005910,5.31e-07,6 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.492603536699674,0.393553906568396,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,1.92136979588513,6.50296737799391,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.891786973732369,0,0.16798212819886,0,0,0,0,178.344092118332,129.519246433456,0.207328115540772,14.4119953416961,7.5745460055828,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,10.2010601531245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.638249487776,2.58303223602738,0,2.21715076768338,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,2.563197838382,0,6.20735660317994,0,0.307160702099232,0,0,0,0,0,0,0.828851746593443,0,0,1.23084805461069,0,0,0,0,3.35387579165574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,40.8098110766866,21.0930464362965,39.873585495377,18.5020672644513,0,0,0,0.31396051279005,1.49590513710141,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,11.5643240185443,5.68394119153913,6.47416086933823,0,0,0,0,0,0,10.6537788769335,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,1.56441106187842,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2474665482002,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,1.2534494701135,1.83807346058077,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.1197689457439,56.4675571331793,75.2400813576883,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,52.6432455907659,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,1.3451348888753,0,0.227662191351298,11.0877962703299,0.806637912890455,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,17.3588690578281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.154348316215889,0,0,1.47088993052343,0,0,0,0,0,0.469919589899268,1.16024198352439,6.49617513512038,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,8.2354025657434,0,0,0,0,0,0.535928260312357,0,0,0,0.23806443146374,0.645889098360061,0.496597714366863,0,0,0,0.217716747896961,0,1.27968900727716,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,4.66029741929859,2.81783311027437,1.9234109538194 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.492603536699674,0.393553906568396,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,1.92136979588513,6.50296737799391,0.164437904603676,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.891786973732369,0,0.16798212819886,0,0,0,0,178.344092118332,129.519246433456,0.207328115540772,14.4119953416961,7.5745460055828,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,10.2010601531245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.638249487776,2.58303223602738,0,2.21715076768338,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,2.563197838382,0,6.20735660317994,0,0.307160702099232,0,0,0,0,0,0,0.828851746593443,0,0,1.23084805461069,0,0,0,0,3.35387579165574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,40.8098110766866,21.0930464362965,39.873585495377,18.5020672644513,0,0,0,0.31396051279005,1.49590513710141,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,11.5643240185443,5.68394119153913,6.47416086933823,0,0,0,0,0,0,10.6537788769335,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,1.56441106187842,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2474665482002,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,1.2534494701135,1.83807346058077,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.1197689457439,56.4675571331793,75.2400813576883,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,52.6432455907659,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0.535701835878287,1.3451348888753,0,0.227662191351298,11.0877962703299,0.806637912890455,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,17.3588690578281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0.154348316215889,0,0,1.47088993052343,0,0,0,0,0,0.469919589899268,1.16024198352439,6.49617513512038,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,8.2354025657434,0,0,0,0,0,0.535928260312357,0,0,0,0.23806443146374,0.645889098360061,0.496597714366863,0,0,0,0.217716747896961,0,1.27968900727716,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,4.66029741929859,2.81783311027437,1.9234109538194 | ||
|short_description=p1@ATP1A4 | |short_description=p1@ATP1A4 | ||
}} | }} |
Latest revision as of 01:07, 18 September 2015
Short description: | p1@ATP1A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP1A4_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000466526, ENST00000470705, NM_001001734, uc001fvh.2_5end |
EntrezGene: | ATP1A4 |
HGNC: | 14073 |
UniProt: | Q13733 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.26e-15 | 5 |
basophil mast progenitor cell | 1.26e-15 | 5 |
transitional epithelial cell | 2.80e-10 | 4 |
urothelial cell | 2.80e-10 | 4 |
Langerhans cell | 2.13e-09 | 5 |
endocrine cell | 1.06e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.57e-08 | 5 |
male genital duct | 3.17e-07 | 3 |
internal male genitalia | 3.17e-07 | 3 |
transitional epithelium | 5.31e-07 | 6 |