FFCP PHASE1:Hg19::chr2:65660107..65660124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200734 | |EntrezGene=200734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17722 | |HGNC=17722 | ||
|TSSclassifier=strong | |||
|UniProt=C9J623 | |UniProt=C9J623 | ||
|association_with_transcript=-336bp_to_ENST00000440972_5end | |association_with_transcript=-336bp_to_ENST00000440972_5end | ||
|cluster_id=chr2:65660107..65660124,- | |||
|description=CAGE_peak_16_at_SPRED2_5end | |description=CAGE_peak_16_at_SPRED2_5end | ||
|id=chr2:65660107..65660124,- | |id=chr2:65660107..65660124,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000453!9.14e-08!5 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002370;8.98e-131;2!UBERON:0005058;8.98e-131;2!UBERON:0009113;8.98e-131;2!UBERON:0004177;2.86e-53;5!UBERON:0005057;2.86e-53;5!UBERON:0000077;6.56e-11;27!UBERON:0002405;6.56e-11;27!UBERON:0002368;2.51e-07;33!UBERON:0002390;2.51e-07;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.98e-131;2!UBERON:0005058;8.98e-131;2!UBERON:0009113;8.98e-131;2!UBERON:0004177;2.86e-53;5!UBERON:0005057;2.86e-53;5!UBERON:0000077;6.56e-11;27!UBERON:0002405;6.56e-11;27!UBERON:0002368;2.51e-07;33!UBERON:0002390;2.51e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.35e-66,4;UBERON:0005058,3.35e-66,4;UBERON:0009113,3.35e-66,4;UBERON:0003295,3.35e-66,4;UBERON:0005562,3.35e-66,4;UBERON:0003351,1.22e-44,6;UBERON:0004177,1.80e-38,7;UBERON:0005057,1.80e-38,7;UBERON:0000974,2.38e-27,10;UBERON:0003408,2.38e-27,10;UBERON:0001042,2.38e-27,10;UBERON:0009145,2.38e-27,10;UBERON:0006562,5.49e-25,11;UBERON:0009722,5.49e-25,11;UBERON:0007690,5.49e-25,11;UBERON:0004807,3.57e-22,28;UBERON:0008814,9.05e-16,18;UBERON:0001557,5.27e-15,19;UBERON:0000072,1.10e-13,47;UBERON:0000065,4.68e-12,54;UBERON:0000077,3.10e-10,29;UBERON:0001004,4.40e-09,74;UBERON:0002368,1.14e-08,35;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0000949,5.58e-07,45 | |||
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| ||
|short_description=p16@SPRED2 | |short_description=p16@SPRED2 | ||
}} | }} |
Latest revision as of 01:01, 18 September 2015
Short description: | p16@SPRED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SPRED2_5end |
Coexpression cluster: | NA |
Association with transcript: | -336bp_to_ENST00000440972_5end |
EntrezGene: | SPRED2 |
HGNC: | 17722 |
UniProt: | C9J623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.35e-66 | 4 |
hemolymphoid system gland | 3.35e-66 | 4 |
thymic region | 3.35e-66 | 4 |
pharyngeal gland | 3.35e-66 | 4 |
thymus primordium | 3.35e-66 | 4 |
pharyngeal epithelium | 1.22e-44 | 6 |
hemopoietic organ | 1.80e-38 | 7 |
immune organ | 1.80e-38 | 7 |
neck | 2.38e-27 | 10 |
gland of gut | 2.38e-27 | 10 |
chordate pharynx | 2.38e-27 | 10 |
pharyngeal region of foregut | 2.38e-27 | 10 |
pharynx | 5.49e-25 | 11 |
entire pharyngeal arch endoderm | 5.49e-25 | 11 |
early pharyngeal endoderm | 5.49e-25 | 11 |
respiratory system epithelium | 3.57e-22 | 28 |
pharyngeal arch system | 9.05e-16 | 18 |
upper respiratory tract | 5.27e-15 | 19 |
segment of respiratory tract | 1.10e-13 | 47 |
respiratory tract | 4.68e-12 | 54 |
mixed endoderm/mesoderm-derived structure | 3.10e-10 | 29 |
respiratory system | 4.40e-09 | 74 |
endocrine gland | 1.14e-08 | 35 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
endocrine system | 5.58e-07 | 45 |