FFCP PHASE1:Hg19::chr6:31865552..31865575,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1248 | |||
|TSSclassifier=strong | |||
|UniProt=B3KTX9,B4DQI1,E9PDZ0 | |||
|association_with_transcript=0bp_to_ENST00000432397,ENST00000469372,ENST00000497706,uc003nyc.2,uc011doo.1_5end | |||
|cluster_id=chr6:31865552..31865575,+ | |||
|description=CAGE_peak_2_at_C2_5end | |||
|id=chr6:31865552..31865575,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.55e-10!53;CL:0000051!8.55e-10!53;CL:0000838!1.45e-09!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.60e-10,53;CL:0000051,7.60e-10,53;CL:0000838,1.30e-09,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-31!115;UBERON:0001049!1.18e-15!57;UBERON:0005068!1.18e-15!57;UBERON:0006241!1.18e-15!57;UBERON:0007135!1.18e-15!57;UBERON:0002780!1.52e-12!41;UBERON:0001890!1.52e-12!41;UBERON:0006240!1.52e-12!41;UBERON:0003080!3.03e-12!42;UBERON:0002616!1.15e-11!59;UBERON:0000955!7.13e-11!69;UBERON:0006238!7.13e-11!69;UBERON:0001017!1.27e-09!82;UBERON:0001893!1.99e-09!34;UBERON:0005743!3.24e-09!86;UBERON:0002791!4.23e-09!33;UBERON:0002020!6.22e-09!34;UBERON:0003528!6.22e-09!34;UBERON:0001869!1.08e-08!32;UBERON:0002346!1.57e-08!90;UBERON:0003075!1.81e-08!86;UBERON:0007284!1.81e-08!86;UBERON:0000073!1.08e-07!94;UBERON:0001016!1.08e-07!94;UBERON:0002619!2.26e-07!22;UBERON:0001950!8.79e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.11e-09;41!UBERON:0001890;2.11e-09;41!UBERON:0000073;2.31e-09;53!UBERON:0002616;2.31e-09;53!UBERON:0007023;6.74e-09;114!UBERON:0001893;3.32e-08;34!UBERON:0002791;4.42e-08;32!UBERON:0001869;7.74e-08;32!UBERON:0003528;8.09e-08;34!UBERON:0002020;8.09e-08;34!UBERON:0002619;1.18e-07;22!UBERON:0001950;3.97e-07;20!UBERON:0000178;6.30e-07;15!UBERON:0000179;6.30e-07;15!UBERON:0000463;6.30e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.60e-31,114;UBERON:0001049,1.23e-16,56;UBERON:0005068,1.23e-16,56;UBERON:0006241,1.23e-16,56;UBERON:0007135,1.23e-16,56;UBERON:0000073,1.42e-15,53;UBERON:0002616,1.42e-15,53;UBERON:0002780,3.84e-13,41;UBERON:0001890,3.84e-13,41;UBERON:0003080,3.84e-13,41;UBERON:0006240,3.84e-13,41;UBERON:0000955,1.20e-11,68;UBERON:0006238,1.20e-11,68;UBERON:0001017,2.03e-10,81;UBERON:0001893,6.46e-10,34;UBERON:0002346,1.99e-09,86;UBERON:0003528,2.13e-09,34;UBERON:0002020,2.13e-09,34;UBERON:0003075,2.21e-09,82;UBERON:0007284,2.21e-09,82;UBERON:0001869,3.71e-09,32;UBERON:0002791,4.00e-09,32;UBERON:0001016,1.37e-08,89;UBERON:0002619,9.38e-08,22;UBERON:0001950,3.79e-07,20 | |||
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| |||
|short_description=p2@C2 | |||
}} |
Latest revision as of 00:50, 18 September 2015
Short description: | p2@C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432397, ENST00000469372, ENST00000497706, uc003nyc.2, uc011doo.1_5end |
EntrezGene: | C2 |
HGNC: | 1248 |
UniProt: | B3KTX9B4DQI1E9PDZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.60e-10 | 53 |
common lymphoid progenitor | 7.60e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.30e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.60e-31 | 114 |
neural tube | 1.23e-16 | 56 |
neural rod | 1.23e-16 | 56 |
future spinal cord | 1.23e-16 | 56 |
neural keel | 1.23e-16 | 56 |
regional part of nervous system | 1.42e-15 | 53 |
regional part of brain | 1.42e-15 | 53 |
regional part of forebrain | 3.84e-13 | 41 |
forebrain | 3.84e-13 | 41 |
anterior neural tube | 3.84e-13 | 41 |
future forebrain | 3.84e-13 | 41 |
brain | 1.20e-11 | 68 |
future brain | 1.20e-11 | 68 |
central nervous system | 2.03e-10 | 81 |
telencephalon | 6.46e-10 | 34 |
neurectoderm | 1.99e-09 | 86 |
brain grey matter | 2.13e-09 | 34 |
gray matter | 2.13e-09 | 34 |
neural plate | 2.21e-09 | 82 |
presumptive neural plate | 2.21e-09 | 82 |
cerebral hemisphere | 3.71e-09 | 32 |
regional part of telencephalon | 4.00e-09 | 32 |
nervous system | 1.37e-08 | 89 |
regional part of cerebral cortex | 9.38e-08 | 22 |
neocortex | 3.79e-07 | 20 |