FFCP PHASE1:Hg19::chr16:81214917..81214946,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114780 | |EntrezGene=114780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21715 | |HGNC=21715 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z442 | |UniProt=Q7Z442 | ||
|association_with_transcript=0bp_to_ENST00000527937,ENST00000529791,ENST00000531391,ENST00000533478,uc002fgg.1,uc002fgi.2,uc002fgl.1_5end | |association_with_transcript=0bp_to_ENST00000527937,ENST00000529791,ENST00000531391,ENST00000533478,uc002fgg.1,uc002fgi.2,uc002fgl.1_5end | ||
|cluster_id=chr16:81214917..81214946,- | |||
|coexpression_cluster_id=C1378 | |coexpression_cluster_id=C1378 | ||
|description=CAGE_peak_1_at_PKD1L2_5end | |description=CAGE_peak_1_at_PKD1L2_5end | ||
|id=chr16:81214917..81214946,- | |id=chr16:81214917..81214946,- | ||
|ontology_enrichment_celltype=CL:0000325!2.34e-08!39;CL:0000147!7.73e-08!14;CL:0000710!1.71e-07!20 | |ontology_enrichment_celltype=CL:0000325!2.34e-08!39;CL:0000147!7.73e-08!14;CL:0000710!1.71e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.53e-12;13!CL:0002322;4.75e-11;5!CL:0000039;9.40e-11;7!CL:0000586;9.40e-11;7!CL:0000147;3.55e-08;14!CL:0002541;2.83e-07;3!CL:0000148;7.77e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.15e-11,5;CL:0000136,9.60e-11,15;CL:0000039,1.37e-10,7;CL:0000586,1.37e-10,7;CL:0000147,3.16e-08,14;CL:0002541,2.38e-07,3;CL:0000148,6.74e-07,10;CL:0000541,6.74e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.73e-08!143;DOID:305!4.94e-08!106 | |ontology_enrichment_disease=DOID:0050687!2.73e-08!143;DOID:305!4.94e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!6.72e-07!59;UBERON:0000990!6.72e-07!59;UBERON:0003133!8.03e-07!48 | |ontology_enrichment_uberon=UBERON:0005156!6.72e-07!59;UBERON:0000990!6.72e-07!59;UBERON:0003133!8.03e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;8.35e-11;11!UBERON:0003124;2.83e-07;3!UBERON:0000920;2.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,8.60e-11,11;UBERON:0000920,2.38e-07,3;UBERON:0006947,5.27e-07,3;UBERON:0004054,5.27e-07,3 | |||
|phase1_expression=0.363356758541113,11.1332272423311,1.69145284915165,0,4.02264984984559,0,2.53299878168311,0,1.56711376919903,0,0,0,0,0,0.331397375727916,0,0,0,0,0.984968464614303,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0.560677600142307,0,0,0.933633106199299,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0.184099797284599,0.484938170456436,0,0.10075209822764,0,0,0,0,7.68434348616451,1.06023814657188,5.34492137199785,4.66474747569167,2.52320850875628,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0.588664395376038,0.38474715694639,0,0,1.6462960453256,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0.325808305310325,0,0,1.62302566965108,0.234817388471643,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.253991577168676,0.763976851116555,1.17217447210047,1.71072446022705,0.514137463516618,0,1.42913216315289,0.112131084345361,0,0,0.646358578788889,28.6125156681506,0,0.26593811658487,0,0,0,0,0.57191197463259,1.08524321078289,0.823240336780769,0,0.355391948742546,0,3.31583314765545,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0,2.5196248195744,0.587403472388222,0,0,0,0,0,0,0.604780586659361,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0.655622074797121,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,6.66770325302612,0.984043937099117,1.30151357865721,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567174531442,0,1.28381696410176,0,0,0.719489830333259,1.64722217841633,0.942499218765491,0,0,0,0,0,1.05650146756755,0.818999468447914,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,5.87532391201102,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,3.58116727106535,0,5.52889263778618,0,0,1.00177834520615,0,0,1.39473591775749,1.38141957765574,0,1.22722419002586,0,0,0.359473404589307,0.358042349351218,0,0.887790650732402,0,0,0,0,0,0.260427761085233,0.174919999992391,2.17499872630438,0,1.27126825146383,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,2.6932590476329,0.113942055847001,1.38338342632836,5.4752163089961,9.12637924144868,6.69902435437031,1.55715908783166,6.39641731222362,0,0,0,0,0,0,0,0,0,1.63232808159148,0,0,0.995261931078505,1.59223616106011,1.22206028986725,0,0,0,0.471807930864739,0,0,0,0.978323094660449,2.42780379534093,1.57833761139756,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0.391969589657511,0.522355239482415,1.7472666824203,2.23581842213102,0.19351266257817,0,0.0821154570532092,0.775912131907355,3.00070830751101,0.225980740780532,0.411125773940253,0,0,0.586654148204409,1.36269994427607,1.06726497369676,0.799238438328521,0,0,0,0.14405479798815,0.124252535565433,0,0.815425236441684,1.04602846312333,0,0.866851769704557,0,0,0,0,0,5.02708322290058,3.43740636017525,0,0.399358000997982,0,0.446342914883745,2.14987111957524,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0.482259445395058,1.2378549293751,2.49264202817511,0,0,0,0.335434687599266,0,0.314727528809989,0,0,1.15149118391667,3.57347663186684,0,0.25426853765475,0.542999601753713,0,0.653174720218818,0,0,0.340776043570843,0.566560457600628,0,0,0,0,2.05304205461195,0,0.747511887973863,0.943225830597996,0,0,0,0,0,12.5124094774979,16.0441532174528,13.7855509543558,15.4100136433608,0.471162288750703,0,0,0,2.86704597845036,3.88251680378983,0.18628920882415,0,0,1.06154382279153,0,0.705797459094515,0,0,0,0,0,0.568209015825267,2.26411111577318,0,0.457680136793847,0.302461847526478,0,0,0,0.449803112163605,0,0,0.53168342911599,0,1.20206087197775,0.761610424337591,0,0,1.07410557042488,0.464033759878494,0,0,0,0,1.26184898228651,5.9712147426264,2.14441591374926,0,0.226705925512272,1.15761237161917,0,1.25362188757041,0,0.438568099157414,0,0.771656153083659,0.844712203265363,0.256241518587947,1.0362910251936,0.911579868532147,0,0,0,0,0,0.983091635014877,0.633936370075881,0,0,0,3.97261167496785,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8374728641192,0.128458450192919,0,0,0,0,0,0,0,2.06110208852154,0,0,0,0,0,0.198916222116275,0.300841313397029,1.21023041222112,0,1.83334686136996,0,1.33070477595341,0,0,0,0,0,0,2.48105589194647,0,0,0,0.672567444437648,0,0,1.86274977341542,0,1.71488009437418,0,0,0.827356886187777,0,0.706437835654626,0,0.560544326627578,0,0.215927591218621,0.47775168788705,2.64463213453628,0,0,0,0,0,0,0,0.430227358820278,0.946656005844523,1.36341447614652,7.62096690343672,1.14553434272025,0.31020638566432,0,0.559277158988962,0,0,0,0.307988420568741,0,1.45713297917742,0,0,0,0,0,0,0.463044948647668,0,0,2.69663153929296,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,1.7653100671617,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,1.51399709802095,0,0,1.1218771271618,2.13773924212448,13.3247604325525,0,1.21245917149183,0.535928260312357,0,0,0.213233981900981,0.23806443146374,0,0.186224142887574,0.112131862580613,0.25458863311266,0.404234377916439,0.653150243690884,0,0,0.502055437748735,0,0,1.17400080465487,0,0,0,3.30051899293739,0.813792356631477,3.32878387092756,0.603821380773079,0 | |phase1_expression=0.363356758541113,11.1332272423311,1.69145284915165,0,4.02264984984559,0,2.53299878168311,0,1.56711376919903,0,0,0,0,0,0.331397375727916,0,0,0,0,0.984968464614303,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0.560677600142307,0,0,0.933633106199299,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0.184099797284599,0.484938170456436,0,0.10075209822764,0,0,0,0,7.68434348616451,1.06023814657188,5.34492137199785,4.66474747569167,2.52320850875628,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0,0.588664395376038,0.38474715694639,0,0,1.6462960453256,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0.325808305310325,0,0,1.62302566965108,0.234817388471643,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.253991577168676,0.763976851116555,1.17217447210047,1.71072446022705,0.514137463516618,0,1.42913216315289,0.112131084345361,0,0,0.646358578788889,28.6125156681506,0,0.26593811658487,0,0,0,0,0.57191197463259,1.08524321078289,0.823240336780769,0,0.355391948742546,0,3.31583314765545,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0,2.5196248195744,0.587403472388222,0,0,0,0,0,0,0.604780586659361,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0.655622074797121,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,6.66770325302612,0.984043937099117,1.30151357865721,0.515205058238611,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567174531442,0,1.28381696410176,0,0,0.719489830333259,1.64722217841633,0.942499218765491,0,0,0,0,0,1.05650146756755,0.818999468447914,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,5.87532391201102,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,3.58116727106535,0,5.52889263778618,0,0,1.00177834520615,0,0,1.39473591775749,1.38141957765574,0,1.22722419002586,0,0,0.359473404589307,0.358042349351218,0,0.887790650732402,0,0,0,0,0,0.260427761085233,0.174919999992391,2.17499872630438,0,1.27126825146383,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,2.6932590476329,0.113942055847001,1.38338342632836,5.4752163089961,9.12637924144868,6.69902435437031,1.55715908783166,6.39641731222362,0,0,0,0,0,0,0,0,0,1.63232808159148,0,0,0.995261931078505,1.59223616106011,1.22206028986725,0,0,0,0.471807930864739,0,0,0,0.978323094660449,2.42780379534093,1.57833761139756,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0.391969589657511,0.522355239482415,1.7472666824203,2.23581842213102,0.19351266257817,0,0.0821154570532092,0.775912131907355,3.00070830751101,0.225980740780532,0.411125773940253,0,0,0.586654148204409,1.36269994427607,1.06726497369676,0.799238438328521,0,0,0,0.14405479798815,0.124252535565433,0,0.815425236441684,1.04602846312333,0,0.866851769704557,0,0,0,0,0,5.02708322290058,3.43740636017525,0,0.399358000997982,0,0.446342914883745,2.14987111957524,0,0,0.0787831823072236,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0.482259445395058,1.2378549293751,2.49264202817511,0,0,0,0.335434687599266,0,0.314727528809989,0,0,1.15149118391667,3.57347663186684,0,0.25426853765475,0.542999601753713,0,0.653174720218818,0,0,0.340776043570843,0.566560457600628,0,0,0,0,2.05304205461195,0,0.747511887973863,0.943225830597996,0,0,0,0,0,12.5124094774979,16.0441532174528,13.7855509543558,15.4100136433608,0.471162288750703,0,0,0,2.86704597845036,3.88251680378983,0.18628920882415,0,0,1.06154382279153,0,0.705797459094515,0,0,0,0,0,0.568209015825267,2.26411111577318,0,0.457680136793847,0.302461847526478,0,0,0,0.449803112163605,0,0,0.53168342911599,0,1.20206087197775,0.761610424337591,0,0,1.07410557042488,0.464033759878494,0,0,0,0,1.26184898228651,5.9712147426264,2.14441591374926,0,0.226705925512272,1.15761237161917,0,1.25362188757041,0,0.438568099157414,0,0.771656153083659,0.844712203265363,0.256241518587947,1.0362910251936,0.911579868532147,0,0,0,0,0,0.983091635014877,0.633936370075881,0,0,0,3.97261167496785,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8374728641192,0.128458450192919,0,0,0,0,0,0,0,2.06110208852154,0,0,0,0,0,0.198916222116275,0.300841313397029,1.21023041222112,0,1.83334686136996,0,1.33070477595341,0,0,0,0,0,0,2.48105589194647,0,0,0,0.672567444437648,0,0,1.86274977341542,0,1.71488009437418,0,0,0.827356886187777,0,0.706437835654626,0,0.560544326627578,0,0.215927591218621,0.47775168788705,2.64463213453628,0,0,0,0,0,0,0,0.430227358820278,0.946656005844523,1.36341447614652,7.62096690343672,1.14553434272025,0.31020638566432,0,0.559277158988962,0,0,0,0.307988420568741,0,1.45713297917742,0,0,0,0,0,0,0.463044948647668,0,0,2.69663153929296,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.178553938605658,0.352894871715692,1.7653100671617,0.730336388246517,0,0,0,0,0,0,0,0.462175628631418,0,1.51399709802095,0,0,1.1218771271618,2.13773924212448,13.3247604325525,0,1.21245917149183,0.535928260312357,0,0,0.213233981900981,0.23806443146374,0,0.186224142887574,0.112131862580613,0.25458863311266,0.404234377916439,0.653150243690884,0,0,0.502055437748735,0,0,1.17400080465487,0,0,0,3.30051899293739,0.813792356631477,3.32878387092756,0.603821380773079,0 | ||
|short_description=p1@PKD1L2 | |short_description=p1@PKD1L2 | ||
}} | }} |
Latest revision as of 00:46, 18 September 2015
Short description: | p1@PKD1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKD1L2_5end |
Coexpression cluster: | C1378_Mesenchymal_mature_Adipocyte_testicular_choriocarcinoma_chorionic_seminal |
Association with transcript: | 0bp_to_ENST00000527937, ENST00000529791, ENST00000531391, ENST00000533478, uc002fgg.1, uc002fgi.2, uc002fgl.1_5end |
EntrezGene: | PKD1L2 |
HGNC: | 21715 |
UniProt: | Q7Z442 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.15e-11 | 5 |
fat cell | 9.60e-11 | 15 |
germ line cell | 1.37e-10 | 7 |
germ cell | 1.37e-10 | 7 |
pigment cell | 3.16e-08 | 14 |
chorionic membrane mesenchymal stem cell | 2.38e-07 | 3 |
melanocyte | 6.74e-07 | 10 |
melanoblast | 6.74e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 8.60e-11 | 11 |
egg chorion | 2.38e-07 | 3 |
male genital duct | 5.27e-07 | 3 |
internal male genitalia | 5.27e-07 | 3 |