FFCP PHASE1:Hg19::chr5:43484423..43484517,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:43484423..43484517,-
|short_description=p2@C5orf28
|description=CAGE_peak_2_at_C5orf28_5end
|association_with_transcript=-428bp_to_ENST00000511525_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64417 | |EntrezGene=64417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26139 | |HGNC=26139 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-428bp_to_ENST00000511525_5end | |||
|cluster_id=chr5:43484423..43484517,- | |||
|coexpression_cluster_id=C871 | |||
|description=CAGE_peak_2_at_C5orf28_5end | |||
|id=chr5:43484423..43484517,- | |||
|ontology_enrichment_celltype=CL:0000838!1.41e-19!52;CL:0000542!1.35e-18!53;CL:0000051!1.35e-18!53;CL:0000738!8.58e-16!140;CL:0002031!1.71e-14!124;CL:0000037!7.14e-14!172;CL:0000566!7.14e-14!172;CL:0002087!9.86e-14!119;CL:0000988!8.65e-13!182;CL:0000791!3.62e-12!18;CL:0000789!3.62e-12!18;CL:0002420!3.62e-12!18;CL:0002419!3.62e-12!18;CL:0000790!3.62e-12!18;CL:0000084!6.23e-12!25;CL:0000827!6.23e-12!25;CL:0002032!2.36e-11!165;CL:0000837!2.36e-11!165;CL:0000625!3.45e-08!11;CL:0000945!2.08e-07!24;CL:0000826!2.08e-07!24;CL:0000236!4.58e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.40e-13;18!CL:0000789;7.40e-13;18!CL:0002419;7.40e-13;18!CL:0000084;1.33e-12;25!CL:0000542;8.32e-12;53!CL:0000625;1.17e-08;11!CL:0000236;2.18e-08;13!CL:0000945;2.68e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.25e-20,52;CL:0000542,4.16e-19,53;CL:0000051,4.16e-19,53;CL:0000738,1.25e-15,136;CL:0002031,2.09e-14,120;CL:0000037,1.01e-13,168;CL:0002087,1.23e-13,115;CL:0000988,2.99e-13,177;CL:0000791,1.66e-12,18;CL:0000789,1.66e-12,18;CL:0002420,1.66e-12,18;CL:0002419,1.66e-12,18;CL:0000790,1.66e-12,18;CL:0000084,2.75e-12,25;CL:0000827,2.75e-12,25;CL:0002032,3.69e-11,161;CL:0000837,3.69e-11,161;CL:0000625,2.11e-08,11;CL:0000945,1.57e-07,24;CL:0000826,1.57e-07,24;CL:0000236,3.68e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;7.40e-13;18!CL:0000051;8.32e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.87e-07;15!UBERON:0000179;9.87e-07;15!UBERON:0000463;9.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@C5orf28 | |||
}} | }} |
Latest revision as of 00:40, 18 September 2015
Short description: | p2@C5orf28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C5orf28_5end |
Coexpression cluster: | C871_CD19_Mast_CD4_CD8_Natural_Peripheral_Basophils |
Association with transcript: | -428bp_to_ENST00000511525_5end |
EntrezGene: | C5orf28 |
HGNC: | 26139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.25e-20 | 52 |
lymphocyte | 4.16e-19 | 53 |
common lymphoid progenitor | 4.16e-19 | 53 |
leukocyte | 1.25e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 2.09e-14 | 120 |
hematopoietic stem cell | 1.01e-13 | 168 |
nongranular leukocyte | 1.23e-13 | 115 |
hematopoietic cell | 2.99e-13 | 177 |
mature alpha-beta T cell | 1.66e-12 | 18 |
alpha-beta T cell | 1.66e-12 | 18 |
immature T cell | 1.66e-12 | 18 |
mature T cell | 1.66e-12 | 18 |
immature alpha-beta T cell | 1.66e-12 | 18 |
T cell | 2.75e-12 | 25 |
pro-T cell | 2.75e-12 | 25 |
hematopoietic oligopotent progenitor cell | 3.69e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.69e-11 | 161 |
CD8-positive, alpha-beta T cell | 2.11e-08 | 11 |
lymphocyte of B lineage | 1.57e-07 | 24 |
pro-B cell | 1.57e-07 | 24 |
B cell | 3.68e-07 | 14 |