FFCP PHASE1:Hg19::chr10:33246846..33246855,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=strong | |||
|UniProt=P05556 | |||
|association_with_transcript=-24bp_to_ENST00000396033,NM_133376,uc001iws.3_5end | |||
|cluster_id=chr10:33246846..33246855,- | |||
|coexpression_cluster_id=C2058 | |||
|description=CAGE_peak_11_at_ITGB1_5end | |||
|id=chr10:33246846..33246855,- | |||
|ontology_enrichment_celltype=CL:0000220!6.93e-16!246;CL:0002321!1.05e-15!248;CL:0000548!2.17e-15!679;CL:0000004!2.17e-15!679;CL:0000255!2.17e-15!679;CL:0000012!3.25e-15!682;CL:0000359!7.37e-14!32;CL:0000066!1.34e-13!254;CL:0000055!5.81e-12!180;CL:0000680!2.83e-11!57;CL:0000056!2.83e-11!57;CL:0000355!2.83e-11!57;CL:0000192!3.56e-11!42;CL:0000514!3.56e-11!42;CL:0000222!1.86e-10!119;CL:0000187!3.23e-10!54;CL:0002371!1.13e-09!591;CL:0000144!1.23e-09!625;CL:0000183!3.32e-09!59;CL:0000003!6.66e-09!722;CL:0000393!9.61e-09!60;CL:0000211!9.61e-09!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.05e-16;32!CL:0000192;2.35e-09;43!CL:0002539;7.92e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.32e-18,32;CL:0000192,1.84e-12,43;CL:0000514,1.84e-12,43;CL:0000680,8.50e-10,58;CL:0000056,8.50e-10,58;CL:0000355,8.50e-10,58;CL:0000187,7.07e-09,55;CL:0002321,1.20e-08,250;CL:0002539,5.23e-08,10;CL:0000393,6.43e-08,61;CL:0000211,6.43e-08,61;CL:0000222,9.51e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.35e-09;43 | |||
|ontology_enrichment_disease=DOID:2394!4.39e-09!14;DOID:193!3.30e-07!29;DOID:120!4.53e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.51e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.39e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.84e-16!42;UBERON:0003509!2.84e-16!42;UBERON:0004572!2.84e-16!42;UBERON:0004573!1.63e-15!33;UBERON:0004571!1.63e-15!33;UBERON:0002100!1.08e-14!216;UBERON:0002049!1.88e-13!79;UBERON:0007798!1.88e-13!79;UBERON:0005256!6.26e-13!143;UBERON:0000486!6.68e-13!82;UBERON:0001981!1.03e-12!60;UBERON:0007500!1.03e-12!60;UBERON:0004537!1.03e-12!60;UBERON:0006965!1.03e-12!60;UBERON:0000055!2.68e-12!69;UBERON:0003914!4.58e-12!118;UBERON:0000914!5.49e-12!83;UBERON:0002329!5.49e-12!83;UBERON:0003077!5.49e-12!83;UBERON:0003059!5.49e-12!83;UBERON:0007282!5.49e-12!83;UBERON:0009618!5.49e-12!83;UBERON:0007285!5.49e-12!83;UBERON:0000490!6.45e-12!138;UBERON:0004290!2.00e-11!70;UBERON:0003104!5.25e-11!238;UBERON:0009142!5.25e-11!238;UBERON:0001134!1.20e-09!61;UBERON:0002036!1.20e-09!61;UBERON:0003082!1.20e-09!61;UBERON:0000926!4.24e-09!448;UBERON:0004120!4.24e-09!448;UBERON:0006603!4.24e-09!448;UBERON:0004872!6.27e-09!84;UBERON:0000947!8.20e-09!21;UBERON:0010191!8.20e-09!21;UBERON:0002385!9.02e-09!63;UBERON:0001015!9.02e-09!63;UBERON:0000383!9.02e-09!63;UBERON:0004535!1.31e-08!110;UBERON:0001009!4.98e-08!113;UBERON:0000480!1.01e-07!626;UBERON:0000467!1.11e-07!625;UBERON:0000992!4.36e-07!13;UBERON:0000468!9.11e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.63e-19;33!UBERON:0004571;4.63e-19;33!UBERON:0001637;5.15e-13;42!UBERON:0003509;5.15e-13;42!UBERON:0004572;5.15e-13;42!UBERON:0000947;5.41e-10;21!UBERON:0010191;5.41e-10;21!UBERON:0007500;2.34e-08;56!UBERON:0001981;2.34e-08;56!UBERON:0004537;2.34e-08;56!UBERON:0004237;7.92e-08;10!UBERON:0004695;7.92e-08;10!UBERON:0002111;7.92e-08;10!UBERON:0004178;7.92e-08;10!UBERON:0003914;1.22e-07;74!UBERON:0000992;1.84e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.74e-21,33;UBERON:0004571,1.74e-21,33;UBERON:0001637,1.10e-19,42;UBERON:0003509,1.10e-19,42;UBERON:0004572,1.10e-19,42;UBERON:0007500,4.55e-15,59;UBERON:0001981,4.55e-15,59;UBERON:0004537,4.55e-15,59;UBERON:0006965,4.55e-15,59;UBERON:0003914,9.55e-13,117;UBERON:0002049,6.56e-12,78;UBERON:0007798,6.56e-12,78;UBERON:0000055,1.05e-11,68;UBERON:0000486,1.34e-11,83;UBERON:0004872,1.98e-10,83;UBERON:0002329,2.96e-10,71;UBERON:0003059,2.96e-10,71;UBERON:0007282,2.96e-10,71;UBERON:0004290,2.96e-10,71;UBERON:0009618,2.96e-10,71;UBERON:0000947,4.38e-10,21;UBERON:0010191,4.38e-10,21;UBERON:0003077,5.56e-10,72;UBERON:0007285,5.56e-10,72;UBERON:0007503,6.56e-10,78;UBERON:0002100,6.90e-10,199;UBERON:0007524,1.02e-09,73;UBERON:0000490,1.29e-09,148;UBERON:0001134,1.20e-08,62;UBERON:0002036,1.20e-08,62;UBERON:0003082,1.20e-08,62;UBERON:0005256,2.34e-08,122;UBERON:0002385,3.92e-08,64;UBERON:0001015,3.92e-08,64;UBERON:0000383,3.92e-08,64;UBERON:0004237,5.23e-08,10;UBERON:0004695,5.23e-08,10;UBERON:0002111,5.23e-08,10;UBERON:0004178,5.23e-08,10;UBERON:0004535,1.30e-07,109;UBERON:0000992,1.62e-07,13;UBERON:0003104,2.03e-07,160;UBERON:0009142,2.03e-07,160;UBERON:0001009,3.90e-07,112 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.563817616383885,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0,0.982935746006035,0.697801167972428,0.655324116390517,0.791300934685361,0.123766352960047,0.662794751455832,4.70627602516243,3.61616716814386,3.65155045193687,4.87932798790507,0,0.204000691244253,0.313454721478088,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,1.83884244895785,0.90361775633475,1.84877005083394,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.255725123687061,0,0,0.289693037921647,0,0,1.32348744029695,1.33037638477538,0.43917392846563,0,0.364295288292542,0.741568885568859,1.29818957461873,1.21890816109487,0.664789802594326,0,0,0,0.198762407366705,1.72046919021225,0.347140501607594,0.56530794192401,0.838998872419812,0.825354125820202,0.626984899610432,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,2.28081631715554,0,1.10298924103761,1.62028389576352,1.16089646769304,0.898117490504679,1.12611480483322,0,0,1.46561395144326,0,0,0.436094052142534,1.98788780678127,1.64619665163954,3.57504788195691,1.14734648299525,2.12801029319014,0,1.06748995729705,1.2333377420858,0,0.942974704487816,1.47115712802113,0.151357427644931,0.576175924479999,0,1.5608003841516,0.570471821544449,1.49448680551801,0.352303495931295,0,0.421352420106746,1.42907919878425,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0.841680569770331,0.375355559615893,1.10825646193673,0,0,0.150238058906597,0.794025282120147,0.179389635688862,1.06778694409284,1.27159140695737,2.40072876867522,0.618315175430633,0.257640540045629,0.558350568994769,1.68776332241266,0.974370051611986,0.252433774244115,0.368199594569197,0,0.355009592516614,0.906768884048762,0.847802961552438,4.05847791642923,4.63668405004419,6.88331028933609,0.365921118388786,0,0.348581828608555,0.414644220061482,0.756962552626885,0,1.56449532329816,1.92972281457866,4.14404764057442,0,0.721879481669586,0.354920400119532,0.842923450390509,0.723033089650446,0.55146986366197,1.30727666455444,1.18635309555548,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,1.20097467208968,2.52425656439839,1.1240175325762,1.80952150340936,1.66659201285353,0,0,0,0.463721619900307,2.34817388471643,0.577465791044295,0,0.570762456703795,0,0,0,0.468008530278475,0.148631162288728,1.87467667973554,4.36753533317035,1.98485136139341,2.5971971583826,3.19697332365358,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,1.7601188597028,2.58543431515556,0,3.381211010224,1.86156681609409,4.16029747645464,0,0,0.266422179016099,1.14382394926518,0,0,0.977208552881205,0.710783897485092,0,4.22015127883421,4.35766729300147,4.39881161201051,0,0,0,0.718874566474748,0,1.42636905040718,3.32997005335432,0.61642896765115,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,1.45579603071565,1.60586089917446,1.26161932027148,0.468565659970853,1.50473049863859,0,0,1.99267679560631,2.21243002250044,0.60818530127658,0.195801157462741,0,0.206768026122887,0,0.106727557803444,0,0,0,0.744323423456331,0.460385919864187,0.841980283299221,0.128139149255701,2.04682899626681,1.60853921143608,0,1.54209693802656,2.84098760501003,2.79232330446951,1.55776328755086,1.51073491997947,0.362578348774867,9.62431057455767,0.644566922551274,0.114814448164607,1.27463817604702,0.393373244878272,0.451199612907412,5.62211960862228,1.56869953835371,0,6.01644284689391,0,0.340187410553031,1.51141141271498,1.54227252690289,0.270946437543853,0,0.764628819135115,0,1.11937377361089,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,1.72279661398852,2.60024098414608,0,0.193341436584244,0.770243085573222,0.460511024178389,0,0.322260734604821,0,0.852266274161009,0.0890320356467374,6.11554186835619,5.38132188622297,1.91419068741876,1.11273558941105,1.85938219718914,5.66662224295152,0.6970372701606,0.308033580176089,2.12922412126809,3.47973196830029,5.18907813490976,6.01124524316363,0.744316738719335,0.949138274156178,1.90630193923825,0.255897791311334,0,1.90921948755562,5.49464048139461,0,0,1.06031162111118,3.23491970517306,1.58510321173008,2.52755073743389,0.48763373908959,3.65570234446927,1.05650146756755,0.409499734223957,0.565621727814851,0,3.85955740482287,1.99031692572366,3.94605796728386,0,0,3.65238678532867,2.78841148289775,0,0.430234056612155,0.491245205065606,4.280052617775,0.354761064070598,0,0,0,0,1.63577591633371,0.67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| |||
|short_description=p11@ITGB1 | |||
}} |
Latest revision as of 00:35, 18 September 2015
Short description: | p11@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ITGB1_5end |
Coexpression cluster: | C2058_Smooth_basal_mesenchymal_tubular_Renal_lung_Urothelial |
Association with transcript: | -24bp_to_ENST00000396033, NM_133376, uc001iws.3_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.32e-18 | 32 |
smooth muscle cell | 1.84e-12 | 43 |
smooth muscle myoblast | 1.84e-12 | 43 |
muscle precursor cell | 8.50e-10 | 58 |
myoblast | 8.50e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.50e-10 | 58 |
muscle cell | 7.07e-09 | 55 |
embryonic cell | 1.20e-08 | 250 |
aortic smooth muscle cell | 5.23e-08 | 10 |
electrically responsive cell | 6.43e-08 | 61 |
electrically active cell | 6.43e-08 | 61 |
mesodermal cell | 9.51e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.39e-11 | 14 |