FFCP PHASE1:Hg19::chr10:33246815..33246830,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |EntrezGene=3688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |HGNC=6153 | ||
|TSSclassifier=strong | |||
|UniProt=P05556 | |UniProt=P05556 | ||
|association_with_transcript=0bp_to_ENST00000396033,NM_133376,uc001iws.3_5end | |association_with_transcript=0bp_to_ENST00000396033,NM_133376,uc001iws.3_5end | ||
|cluster_id=chr10:33246815..33246830,- | |||
|coexpression_cluster_id=C2058 | |coexpression_cluster_id=C2058 | ||
|description=CAGE_peak_4_at_ITGB1_5end | |description=CAGE_peak_4_at_ITGB1_5end | ||
|id=chr10:33246815..33246830,- | |id=chr10:33246815..33246830,- | ||
|ontology_enrichment_celltype=CL:0000220!6.14e-26!246;CL:0002321!8.96e-26!248;CL:0000222!4.21e-22!119;CL:0000548!1.65e-18!679;CL:0000004!1.65e-18!679;CL:0000255!1.65e-18!679;CL:0000055!2.64e-18!180;CL:0000012!1.77e-17!682;CL:0000066!4.60e-16!254;CL:0000359!5.59e-16!32;CL:0000680!5.41e-15!57;CL:0000056!5.41e-15!57;CL:0000355!5.41e-15!57;CL:0000187!2.92e-14!54;CL:0000192!3.58e-14!42;CL:0000514!3.58e-14!42;CL:0000183!6.33e-14!59;CL:0000393!1.97e-13!60;CL:0000211!1.97e-13!60;CL:0000144!1.72e-12!625;CL:0002371!1.88e-12!591;CL:0000003!2.32e-09!722;CL:0002139!2.59e-09!24;CL:0000057!4.07e-09!75;CL:0000213!1.28e-07!57;CL:0000215!1.28e-07!57;CL:0000071!2.26e-07!18;CL:0002546!2.26e-07!18;CL:0000115!4.86e-07!35 | |ontology_enrichment_celltype=CL:0000220!6.14e-26!246;CL:0002321!8.96e-26!248;CL:0000222!4.21e-22!119;CL:0000548!1.65e-18!679;CL:0000004!1.65e-18!679;CL:0000255!1.65e-18!679;CL:0000055!2.64e-18!180;CL:0000012!1.77e-17!682;CL:0000066!4.60e-16!254;CL:0000359!5.59e-16!32;CL:0000680!5.41e-15!57;CL:0000056!5.41e-15!57;CL:0000355!5.41e-15!57;CL:0000187!2.92e-14!54;CL:0000192!3.58e-14!42;CL:0000514!3.58e-14!42;CL:0000183!6.33e-14!59;CL:0000393!1.97e-13!60;CL:0000211!1.97e-13!60;CL:0000144!1.72e-12!625;CL:0002371!1.88e-12!591;CL:0000003!2.32e-09!722;CL:0002139!2.59e-09!24;CL:0000057!4.07e-09!75;CL:0000213!1.28e-07!57;CL:0000215!1.28e-07!57;CL:0000071!2.26e-07!18;CL:0002546!2.26e-07!18;CL:0000115!4.86e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.50e-16;32!CL:0000192;1.14e-10;43!CL:0002139;2.98e-10;24!CL:0000071;3.75e-08;18!CL:0000187;1.27e-07;55!CL:0002539;4.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.25e-22,250;CL:0000222,5.02e-22,121;CL:0000359,1.39e-17,32;CL:0000680,5.27e-15,58;CL:0000056,5.27e-15,58;CL:0000355,5.27e-15,58;CL:0000192,1.14e-14,43;CL:0000514,1.14e-14,43;CL:0000187,3.39e-14,55;CL:0000066,3.25e-13,253;CL:0000393,1.73e-12,61;CL:0000211,1.73e-12,61;CL:0000057,5.51e-11,76;CL:0002139,3.55e-10,24;CL:0000071,5.06e-08,18;CL:0002546,5.06e-08,18;CL:0000115,1.05e-07,36;CL:0000213,1.80e-07,58;CL:0000215,1.80e-07,58;CL:0002539,4.88e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-10;43!CL:0002546;3.75e-08;18!CL:0000355;8.64e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.84e-08!14 | |ontology_enrichment_disease=DOID:2394!2.84e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.90e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.07e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!4.14e-24!118;UBERON:0002049!1.21e-22!79;UBERON:0007798!1.21e-22!79;UBERON:0004872!6.20e-21!84;UBERON:0001981!2.51e-20!60;UBERON:0007500!2.51e-20!60;UBERON:0004537!2.51e-20!60;UBERON:0006965!2.51e-20!60;UBERON:0000055!3.98e-20!69;UBERON:0001637!4.26e-19!42;UBERON:0003509!4.26e-19!42;UBERON:0004572!4.26e-19!42;UBERON:0002100!9.53e-19!216;UBERON:0000490!1.48e-18!138;UBERON:0005256!3.36e-18!143;UBERON:0004535!2.88e-17!110;UBERON:0001009!1.17e-16!113;UBERON:0004573!2.84e-16!33;UBERON:0004571!2.84e-16!33;UBERON:0000486!6.24e-16!82;UBERON:0000914!1.41e-15!83;UBERON:0002329!1.41e-15!83;UBERON:0003077!1.41e-15!83;UBERON:0003059!1.41e-15!83;UBERON:0007282!1.41e-15!83;UBERON:0009618!1.41e-15!83;UBERON:0007285!1.41e-15!83;UBERON:0003104!3.81e-15!238;UBERON:0009142!3.81e-15!238;UBERON:0004290!4.08e-14!70;UBERON:0001134!7.12e-13!61;UBERON:0002036!7.12e-13!61;UBERON:0003082!7.12e-13!61;UBERON:0000926!2.03e-12!448;UBERON:0004120!2.03e-12!448;UBERON:0006603!2.03e-12!448;UBERON:0002385!3.11e-12!63;UBERON:0001015!3.11e-12!63;UBERON:0000383!3.11e-12!63;UBERON:0000467!1.59e-10!625;UBERON:0000468!2.12e-10!659;UBERON:0000480!2.84e-10!626;UBERON:0000947!7.00e-10!21;UBERON:0010191!7.00e-10!21;UBERON:0000119!1.44e-08!312;UBERON:0000475!1.75e-08!365;UBERON:0000483!4.37e-08!309;UBERON:0000487!9.82e-08!22;UBERON:0000481!1.70e-07!347;UBERON:0000477!2.02e-07!286;UBERON:0001986!2.26e-07!18;UBERON:0004638!2.26e-07!18;UBERON:0004852!2.26e-07!18;UBERON:0003886!7.44e-07!63 | |ontology_enrichment_uberon=UBERON:0003914!4.14e-24!118;UBERON:0002049!1.21e-22!79;UBERON:0007798!1.21e-22!79;UBERON:0004872!6.20e-21!84;UBERON:0001981!2.51e-20!60;UBERON:0007500!2.51e-20!60;UBERON:0004537!2.51e-20!60;UBERON:0006965!2.51e-20!60;UBERON:0000055!3.98e-20!69;UBERON:0001637!4.26e-19!42;UBERON:0003509!4.26e-19!42;UBERON:0004572!4.26e-19!42;UBERON:0002100!9.53e-19!216;UBERON:0000490!1.48e-18!138;UBERON:0005256!3.36e-18!143;UBERON:0004535!2.88e-17!110;UBERON:0001009!1.17e-16!113;UBERON:0004573!2.84e-16!33;UBERON:0004571!2.84e-16!33;UBERON:0000486!6.24e-16!82;UBERON:0000914!1.41e-15!83;UBERON:0002329!1.41e-15!83;UBERON:0003077!1.41e-15!83;UBERON:0003059!1.41e-15!83;UBERON:0007282!1.41e-15!83;UBERON:0009618!1.41e-15!83;UBERON:0007285!1.41e-15!83;UBERON:0003104!3.81e-15!238;UBERON:0009142!3.81e-15!238;UBERON:0004290!4.08e-14!70;UBERON:0001134!7.12e-13!61;UBERON:0002036!7.12e-13!61;UBERON:0003082!7.12e-13!61;UBERON:0000926!2.03e-12!448;UBERON:0004120!2.03e-12!448;UBERON:0006603!2.03e-12!448;UBERON:0002385!3.11e-12!63;UBERON:0001015!3.11e-12!63;UBERON:0000383!3.11e-12!63;UBERON:0000467!1.59e-10!625;UBERON:0000468!2.12e-10!659;UBERON:0000480!2.84e-10!626;UBERON:0000947!7.00e-10!21;UBERON:0010191!7.00e-10!21;UBERON:0000119!1.44e-08!312;UBERON:0000475!1.75e-08!365;UBERON:0000483!4.37e-08!309;UBERON:0000487!9.82e-08!22;UBERON:0000481!1.70e-07!347;UBERON:0000477!2.02e-07!286;UBERON:0001986!2.26e-07!18;UBERON:0004638!2.26e-07!18;UBERON:0004852!2.26e-07!18;UBERON:0003886!7.44e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.10e-16;33!UBERON:0004571;2.10e-16;33!UBERON:0001637;2.35e-15;42!UBERON:0003509;2.35e-15;42!UBERON:0004572;2.35e-15;42!UBERON:0007500;5.07e-13;56!UBERON:0001981;5.07e-13;56!UBERON:0004537;5.07e-13;56!UBERON:0000055;5.54e-12;65!UBERON:0002049;8.96e-11;75!UBERON:0007798;8.96e-11;75!UBERON:0000947;9.81e-11;21!UBERON:0010191;9.81e-11;21!UBERON:0003914;2.27e-10;74!UBERON:0000487;3.02e-08;22!UBERON:0004638;3.75e-08;18!UBERON:0001986;3.75e-08;18!UBERON:0004852;3.75e-08;18!UBERON:0000490;3.63e-07;33!UBERON:0004237;4.94e-07;10!UBERON:0004695;4.94e-07;10!UBERON:0002111;4.94e-07;10!UBERON:0004178;4.94e-07;10 | |||
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| ||
|short_description=p4@ITGB1 | |short_description=p4@ITGB1 | ||
}} | }} |
Latest revision as of 00:35, 18 September 2015
Short description: | p4@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGB1_5end |
Coexpression cluster: | C2058_Smooth_basal_mesenchymal_tubular_Renal_lung_Urothelial |
Association with transcript: | 0bp_to_ENST00000396033, NM_133376, uc001iws.3_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.25e-22 | 250 |
mesodermal cell | 5.02e-22 | 121 |
vascular associated smooth muscle cell | 1.39e-17 | 32 |
muscle precursor cell | 5.27e-15 | 58 |
myoblast | 5.27e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.27e-15 | 58 |
smooth muscle cell | 1.14e-14 | 43 |
smooth muscle myoblast | 1.14e-14 | 43 |
muscle cell | 3.39e-14 | 55 |
epithelial cell | 3.25e-13 | 253 |
electrically responsive cell | 1.73e-12 | 61 |
electrically active cell | 1.73e-12 | 61 |
fibroblast | 5.51e-11 | 76 |
endothelial cell of vascular tree | 3.55e-10 | 24 |
blood vessel endothelial cell | 5.06e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.06e-08 | 18 |
endothelial cell | 1.05e-07 | 36 |
lining cell | 1.80e-07 | 58 |
barrier cell | 1.80e-07 | 58 |
aortic smooth muscle cell | 4.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.07e-09 | 14 |