FFCP PHASE1:Hg19::chr5:43290263..43290275,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3157 | |EntrezGene=3157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5007 | |HGNC=5007 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-302bp_to_AL050004_5end | |association_with_transcript=-302bp_to_AL050004_5end | ||
|cluster_id=chr5:43290263..43290275,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_HMGCS1_5end | |description=CAGE_peak_8_at_HMGCS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.23e-12!235;DOID:14566!3.76e-11!239;DOID:0050687!2.16e-08!143 | |ontology_enrichment_disease=DOID:162!4.23e-12!235;DOID:14566!3.76e-11!239;DOID:0050687!2.16e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.36e-10!86;UBERON:0007284!1.36e-10!86;UBERON:0002346!2.19e-10!90;UBERON:0001049!4.33e-10!57;UBERON:0005068!4.33e-10!57;UBERON:0006241!4.33e-10!57;UBERON:0007135!4.33e-10!57;UBERON:0000033!5.12e-10!123;UBERON:0002780!1.38e-09!41;UBERON:0001890!1.38e-09!41;UBERON:0006240!1.38e-09!41;UBERON:0004121!1.59e-09!169;UBERON:0000924!1.71e-09!173;UBERON:0006601!1.71e-09!173;UBERON:0002616!2.95e-09!59;UBERON:0000955!3.83e-09!69;UBERON:0006238!3.83e-09!69;UBERON:0003080!4.07e-09!42;UBERON:0002020!4.26e-09!34;UBERON:0003528!4.26e-09!34;UBERON:0000153!4.50e-09!129;UBERON:0007811!4.50e-09!129;UBERON:0001893!3.19e-08!34;UBERON:0001017!3.48e-08!82;UBERON:0002791!4.74e-08!33;UBERON:0001869!5.55e-08!32;UBERON:0000073!6.51e-08!94;UBERON:0001016!6.51e-08!94;UBERON:0005743!8.56e-08!86;UBERON:0000956!9.02e-08!25;UBERON:0000203!9.02e-08!25;UBERON:0002619!1.16e-07!22;UBERON:0003056!1.53e-07!61 | |ontology_enrichment_uberon=UBERON:0003075!1.36e-10!86;UBERON:0007284!1.36e-10!86;UBERON:0002346!2.19e-10!90;UBERON:0001049!4.33e-10!57;UBERON:0005068!4.33e-10!57;UBERON:0006241!4.33e-10!57;UBERON:0007135!4.33e-10!57;UBERON:0000033!5.12e-10!123;UBERON:0002780!1.38e-09!41;UBERON:0001890!1.38e-09!41;UBERON:0006240!1.38e-09!41;UBERON:0004121!1.59e-09!169;UBERON:0000924!1.71e-09!173;UBERON:0006601!1.71e-09!173;UBERON:0002616!2.95e-09!59;UBERON:0000955!3.83e-09!69;UBERON:0006238!3.83e-09!69;UBERON:0003080!4.07e-09!42;UBERON:0002020!4.26e-09!34;UBERON:0003528!4.26e-09!34;UBERON:0000153!4.50e-09!129;UBERON:0007811!4.50e-09!129;UBERON:0001893!3.19e-08!34;UBERON:0001017!3.48e-08!82;UBERON:0002791!4.74e-08!33;UBERON:0001869!5.55e-08!32;UBERON:0000073!6.51e-08!94;UBERON:0001016!6.51e-08!94;UBERON:0005743!8.56e-08!86;UBERON:0000956!9.02e-08!25;UBERON:0000203!9.02e-08!25;UBERON:0002619!1.16e-07!22;UBERON:0003056!1.53e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.95e-19;22!UBERON:0000956;1.96e-16;25!UBERON:0000203;1.96e-16;25!UBERON:0001950;2.82e-13;20!UBERON:0003528;1.98e-12;34!UBERON:0002020;1.98e-12;34!UBERON:0001869;7.16e-11;32!UBERON:0001954;1.31e-10;2!UBERON:0003022;1.31e-10;2!UBERON:0002421;1.31e-10;2!UBERON:0002600;1.31e-10;2!UBERON:0002791;1.75e-10;32!UBERON:0000349;2.46e-09;5!UBERON:0001893;4.30e-09;34!UBERON:0002780;5.17e-09;41!UBERON:0001890;5.17e-09;41!UBERON:0000073;4.55e-07;53!UBERON:0002616;4.55e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002619;7.95e-19;22!UBERON:0000956;1.96e-16;25!UBERON:0000203;1.96e-16;25!UBERON:0001950;2.82e-13;20!UBERON:0003528;1.98e-12;34!UBERON:0002020;1.98e-12;34!UBERON:0001869;7.16e-11;32!UBERON:0001954;1.31e-10;2!UBERON:0003022;1.31e-10;2!UBERON:0002421;1.31e-10;2!UBERON:0002600;1.31e-10;2!UBERON:0002791;1.75e-10;32!UBERON:0000349;2.46e-09;5!UBERON:0001893;4.30e-09;34!UBERON:0002780;5.17e-09;41!UBERON:0001890;5.17e-09;41!UBERON:0000073;4.55e-07;53!UBERON:0002616;4.55e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.51e-18,22;UBERON:0000956,3.43e-16,25;UBERON:0000203,3.43e-16,25;UBERON:0003528,5.08e-14,34;UBERON:0002020,5.08e-14,34;UBERON:0001950,4.16e-13,20;UBERON:0001049,6.12e-13,56;UBERON:0005068,6.12e-13,56;UBERON:0006241,6.12e-13,56;UBERON:0007135,6.12e-13,56;UBERON:0002791,2.34e-12,32;UBERON:0001869,2.34e-12,32;UBERON:0000073,9.70e-12,53;UBERON:0002616,9.70e-12,53;UBERON:0001893,1.52e-11,34;UBERON:0002780,2.98e-11,41;UBERON:0001890,2.98e-11,41;UBERON:0003080,2.98e-11,41;UBERON:0006240,2.98e-11,41;UBERON:0001016,7.50e-11,89;UBERON:0001017,7.69e-11,81;UBERON:0001954,2.08e-10,2;UBERON:0003022,2.08e-10,2;UBERON:0002421,2.08e-10,2;UBERON:0002600,2.08e-10,2;UBERON:0010371,3.16e-10,104;UBERON:0000955,5.55e-10,68;UBERON:0006238,5.55e-10,68;UBERON:0003075,2.84e-09,82;UBERON:0007284,2.84e-09,82;UBERON:0000349,3.23e-09,5;UBERON:0002346,1.05e-08,86;UBERON:0003056,2.47e-08,61;UBERON:0004121,5.32e-08,171;UBERON:0000924,5.32e-08,171;UBERON:0006601,5.32e-08,171;UBERON:0011216,2.35e-07,223 | |||
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| ||
|short_description=p8@HMGCS1 | |short_description=p8@HMGCS1 | ||
}} | }} |
Latest revision as of 00:28, 18 September 2015
Short description: | p8@HMGCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HMGCS1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -302bp_to_AL050004_5end |
EntrezGene: | HMGCS1 |
HGNC: | 5007 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data