FFCP PHASE1:Hg19::chr13:76363027..76363039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLU6 | |UniProt=E9PLU6 | ||
|association_with_transcript=53bp_to_ENST00000497947_5end | |association_with_transcript=53bp_to_ENST00000497947_5end | ||
|cluster_id=chr13:76363027..76363039,+ | |||
|coexpression_cluster_id=C1190 | |||
|description=CAGE_peak_22_at_LMO7_5end | |description=CAGE_peak_22_at_LMO7_5end | ||
|id=chr13:76363027..76363039,+ | |id=chr13:76363027..76363039,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;6.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.57e-18;29 | |||
|ontology_enrichment_disease=DOID:305!7.20e-10!106;DOID:0050687!2.07e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.95e-07;1!DOID:3603;6.95e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.90e-09,106;DOID:0050687,7.86e-08,143;DOID:3111,5.37e-07,1;DOID:3603,5.37e-07,1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.18e-50;9!UBERON:0001557;2.18e-50;9!UBERON:0000072;1.76e-12;37!UBERON:0000065;3.35e-10;44!UBERON:0001134;9.47e-09;16!UBERON:0002036;9.47e-09;16!UBERON:0003978;4.85e-08;3!UBERON:0000946;4.85e-08;3!UBERON:0001004;5.11e-07;65!UBERON:0002426;6.95e-07;1!UBERON:0003831;6.95e-07;1!UBERON:0003898;6.95e-07;1!UBERON:0004830;6.95e-07;1!UBERON:0003830;6.95e-07;1!UBERON:0005175;6.95e-07;1!UBERON:0001774;6.95e-07;1!UBERON:0001103;6.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.13e-50,9;UBERON:0001557,1.27e-28,19;UBERON:0008947,2.91e-13,38;UBERON:0003258,2.91e-13,38;UBERON:0000072,1.12e-12,47;UBERON:0000065,9.23e-11,54;UBERON:0001004,9.53e-09,74;UBERON:0003978,5.22e-08,3;UBERON:0009751,5.22e-08,3;UBERON:0000946,5.22e-08,3;UBERON:0002523,5.22e-08,3;UBERON:0005983,5.22e-08,3;UBERON:0002165,5.22e-08,3;UBERON:0002062,5.22e-08,3;UBERON:0007280,5.22e-08,3;UBERON:0002426,8.02e-07,1;UBERON:0003831,8.02e-07,1;UBERON:0003898,8.02e-07,1;UBERON:0004830,8.02e-07,1;UBERON:0003830,8.02e-07,1;UBERON:0005175,8.02e-07,1;UBERON:0001774,8.02e-07,1;UBERON:0001103,8.02e-07,1;UBERON:0010084,8.02e-07,1 | |||
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| ||
|short_description=p22@LMO7 | |short_description=p22@LMO7 | ||
}} | }} |
Latest revision as of 00:15, 18 September 2015
Short description: | p22@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_LMO7_5end |
Coexpression cluster: | C1190_Skeletal_rhabdomyosarcoma_mesenchymal_giant_mucinous_skeletal_Hep2 |
Association with transcript: | 53bp_to_ENST00000497947_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.13e-50 | 9 |
upper respiratory tract | 1.27e-28 | 19 |
respiratory primordium | 2.91e-13 | 38 |
endoderm of foregut | 2.91e-13 | 38 |
segment of respiratory tract | 1.12e-12 | 47 |
respiratory tract | 9.23e-11 | 54 |
respiratory system | 9.53e-09 | 74 |
valve | 5.22e-08 | 3 |
cardiac mesenchyme | 5.22e-08 | 3 |
cardial valve | 5.22e-08 | 3 |
tunica intima | 5.22e-08 | 3 |
heart layer | 5.22e-08 | 3 |
endocardium | 5.22e-08 | 3 |
endocardial cushion | 5.22e-08 | 3 |
presumptive endocardium | 5.22e-08 | 3 |
chest muscle | 8.02e-07 | 1 |
respiratory system muscle | 8.02e-07 | 1 |
skeletal muscle of trunk | 8.02e-07 | 1 |
respiratory system skeletal muscle | 8.02e-07 | 1 |
thoracic segment muscle | 8.02e-07 | 1 |
chest organ | 8.02e-07 | 1 |
muscle of trunk | 8.02e-07 | 1 |
diaphragm | 8.02e-07 | 1 |
future diaphragm | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.90e-09 | 106 |
cell type cancer | 7.86e-08 | 143 |
cystadenocarcinoma | 5.37e-07 | 1 |
mucinous cystadenocarcinoma | 5.37e-07 | 1 |