FFCP PHASE1:Hg19::chr2:65159651..65159662,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400958 | |EntrezGene=400958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-70bp_to_NR_036586_5end | |association_with_transcript=-70bp_to_NR_036586_5end | ||
|cluster_id=chr2:65159651..65159662,- | |||
|coexpression_cluster_id=C782 | |||
|description=CAGE_peak_5_at_LOC400958_5end | |description=CAGE_peak_5_at_LOC400958_5end | ||
|id=chr2:65159651..65159662,- | |id=chr2:65159651..65159662,- | ||
|ontology_enrichment_celltype=CL:0000945!1.19e-58!24;CL:0000826!1.19e-58!24;CL:0000542!4.16e-29!53;CL:0000051!4.16e-29!53;CL:0000838!1.06e-25!52;CL:0002087!2.70e-21!119;CL:0000236!7.77e-19!14;CL:0002031!4.58e-18!124;CL:0000738!1.42e-17!140;CL:0002032!2.29e-14!165;CL:0000837!2.29e-14!165;CL:0000037!1.24e-13!172;CL:0000566!1.24e-13!172;CL:0000988!1.10e-12!182;CL:0000840!1.65e-11!5;CL:0001029!1.65e-11!5;CL:0000946!1.32e-08!1;CL:0000786!1.32e-08!1;CL:0000980!1.32e-08!1;CL:0000990!7.73e-08!8 | |ontology_enrichment_celltype=CL:0000945!1.19e-58!24;CL:0000826!1.19e-58!24;CL:0000542!4.16e-29!53;CL:0000051!4.16e-29!53;CL:0000838!1.06e-25!52;CL:0002087!2.70e-21!119;CL:0000236!7.77e-19!14;CL:0002031!4.58e-18!124;CL:0000738!1.42e-17!140;CL:0002032!2.29e-14!165;CL:0000837!2.29e-14!165;CL:0000037!1.24e-13!172;CL:0000566!1.24e-13!172;CL:0000988!1.10e-12!182;CL:0000840!1.65e-11!5;CL:0001029!1.65e-11!5;CL:0000946!1.32e-08!1;CL:0000786!1.32e-08!1;CL:0000980!1.32e-08!1;CL:0000990!7.73e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.12e-34;24!CL:0000542;6.99e-12;53!CL:0002087;9.69e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.05e-34,24;CL:0000826,1.05e-34,24;CL:0000542,8.88e-23,53;CL:0000051,8.88e-23,53;CL:0000838,2.36e-16,52;CL:0002087,1.15e-10,115;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0002031,2.87e-07,120;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.99e-12;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.11e-12!10;DOID:12603!4.52e-09!1;DOID:630!9.74e-09!1;DOID:0050177!9.74e-09!1;DOID:0050427!9.74e-09!1 | |ontology_enrichment_disease=DOID:0060058!4.11e-12!10;DOID:12603!4.52e-09!1;DOID:630!9.74e-09!1;DOID:0050177!9.74e-09!1;DOID:0050427!9.74e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:12603;7.05e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,9.85e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.72e-22!3;UBERON:0004854!1.72e-22!3;UBERON:0009034!1.72e-22!3;UBERON:0002095!1.72e-22!3;UBERON:0004782!1.72e-22!3;UBERON:0003281!1.72e-22!3;UBERON:0009664!1.72e-22!3;UBERON:0002296!1.72e-22!3;UBERON:0005602!1.72e-22!3;UBERON:0001179!1.72e-22!3;UBERON:0006293!1.72e-22!3;UBERON:0004177!5.75e-10!7;UBERON:0000945!8.79e-09!8;UBERON:0010039!8.79e-09!8;UBERON:0001154!1.05e-08!1;UBERON:0001153!1.05e-08!1;UBERON:0002372!1.42e-08!1;UBERON:0001961!1.42e-08!1;UBERON:0001744!1.42e-08!1;UBERON:0001735!1.42e-08!1;UBERON:0001882!2.22e-08!1;UBERON:0005403!2.22e-08!1 | |ontology_enrichment_uberon=UBERON:0002106!1.72e-22!3;UBERON:0004854!1.72e-22!3;UBERON:0009034!1.72e-22!3;UBERON:0002095!1.72e-22!3;UBERON:0004782!1.72e-22!3;UBERON:0003281!1.72e-22!3;UBERON:0009664!1.72e-22!3;UBERON:0002296!1.72e-22!3;UBERON:0005602!1.72e-22!3;UBERON:0001179!1.72e-22!3;UBERON:0006293!1.72e-22!3;UBERON:0004177!5.75e-10!7;UBERON:0000945!8.79e-09!8;UBERON:0010039!8.79e-09!8;UBERON:0001154!1.05e-08!1;UBERON:0001153!1.05e-08!1;UBERON:0002372!1.42e-08!1;UBERON:0001961!1.42e-08!1;UBERON:0001744!1.42e-08!1;UBERON:0001735!1.42e-08!1;UBERON:0001882!2.22e-08!1;UBERON:0005403!2.22e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,1.88831355734875,2.44003422072406,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70692089026603,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19226677085613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,1.88831355734875,2.44003422072406,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70692089026603,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936017060556951,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19226677085613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p5@LOC400958 | |short_description=p5@LOC400958 | ||
}} | }} |
Latest revision as of 00:13, 18 September 2015
Short description: | p5@LOC400958 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LOC400958_5end |
Coexpression cluster: | C782_B_Burkitt_lymphoma_splenic_acute_CD19_xeroderma |
Association with transcript: | -70bp_to_NR_036586_5end |
EntrezGene: | LOC400958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.05e-34 | 24 |
pro-B cell | 1.05e-34 | 24 |
lymphocyte | 8.88e-23 | 53 |
common lymphoid progenitor | 8.88e-23 | 53 |
lymphoid lineage restricted progenitor cell | 2.36e-16 | 52 |
nongranular leukocyte | 1.15e-10 | 115 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 2.87e-07 | 120 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.85e-34 | 1 |