FFCP PHASE1:Hg19::chr15:51057854..51057915,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:51057854..51057915,-
|short_description=p1@SPPL2A
|description=CAGE_peak_1_at_SPPL2A_5end
|association_with_transcript=0bp_to_ENST00000560288,NM_032802,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84888 | |EntrezGene=84888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCT8 | |UniProt=Q8TCT8 | ||
|association_with_transcript=0bp_to_ENST00000560288,NM_032802,uc001zyv.2_5end | |||
|cluster_id=chr15:51057854..51057915,- | |||
|description=CAGE_peak_1_at_SPPL2A_5end | |||
|id=chr15:51057854..51057915,- | |||
|ontology_enrichment_celltype=CL:0000766!5.66e-29!76;CL:0002009!1.58e-27!65;CL:0000557!1.41e-26!71;CL:0002194!1.49e-26!63;CL:0000576!1.49e-26!63;CL:0000040!1.49e-26!63;CL:0000559!1.49e-26!63;CL:0000839!6.82e-26!70;CL:0002057!1.15e-21!42;CL:0000860!9.06e-20!45;CL:0000738!4.76e-19!140;CL:0002031!4.83e-15!124;CL:0002087!3.19e-14!119;CL:0000763!5.63e-14!112;CL:0000049!5.63e-14!112;CL:0000134!6.35e-14!358;CL:0002320!3.14e-13!365;CL:0000048!4.22e-10!430;CL:0000219!5.89e-10!390;CL:0000723!1.87e-09!436;CL:0000037!4.74e-09!172;CL:0000566!4.74e-09!172;CL:0002032!9.40e-09!165;CL:0000837!9.40e-09!165;CL:0000988!4.76e-08!182;CL:0000034!1.13e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.62e-18;39!CL:0000234;2.62e-18;39!CL:0000860;6.25e-18;33!CL:0002057;6.25e-18;33!CL:0000576;1.36e-14;48!CL:0000766;1.41e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.65e-30,72;CL:0002009,6.89e-29,61;CL:0002194,6.54e-28,59;CL:0000576,6.54e-28,59;CL:0000040,6.54e-28,59;CL:0000559,6.54e-28,59;CL:0000557,9.42e-28,67;CL:0000839,4.72e-27,66;CL:0000473,1.17e-25,48;CL:0000234,1.17e-25,48;CL:0000860,1.15e-21,42;CL:0002057,1.15e-21,42;CL:0000738,2.29e-19,136;CL:0002031,2.52e-15,120;CL:0002087,1.67e-14,115;CL:0000134,1.87e-14,354;CL:0000763,2.83e-14,108;CL:0000049,2.83e-14,108;CL:0002320,9.73e-14,361;CL:0000048,1.72e-10,427;CL:0000219,2.26e-10,386;CL:0000723,7.91e-10,433;CL:0000037,3.96e-09,168;CL:0002032,7.80e-09,161;CL:0000837,7.80e-09,161;CL:0000988,2.36e-08,177;CL:0000034,5.31e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.79e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!3.26e-24!101;UBERON:0001434!3.26e-24!101;UBERON:0002390!1.36e-23!102;UBERON:0003061!1.36e-23!102;UBERON:0002193!1.52e-23!112;UBERON:0001474!2.11e-23!86;UBERON:0002371!5.91e-23!80;UBERON:0002405!2.62e-20!115;UBERON:0002204!6.71e-15!167;UBERON:0002384!2.09e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.26e-24,100;UBERON:0002390,3.08e-24,98;UBERON:0003061,3.08e-24,98;UBERON:0001474,3.36e-24,82;UBERON:0002193,4.10e-24,108;UBERON:0002371,8.24e-24,76;UBERON:0004765,3.64e-23,90;UBERON:0002405,1.96e-22,93;UBERON:0002204,7.35e-15,167;UBERON:0002384,6.53e-14,371;UBERON:0003081,2.95e-07,203 | |||
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|short_description=p1@SPPL2A | |||
}} | }} |
Latest revision as of 00:04, 18 September 2015
Short description: | p1@SPPL2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPPL2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560288, NM_032802, uc001zyv.2_5end |
EntrezGene: | SPPL2A |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.65e-30 | 72 |
macrophage dendritic cell progenitor | 6.89e-29 | 61 |
monopoietic cell | 6.54e-28 | 59 |
monocyte | 6.54e-28 | 59 |
monoblast | 6.54e-28 | 59 |
promonocyte | 6.54e-28 | 59 |
granulocyte monocyte progenitor cell | 9.42e-28 | 67 |
myeloid lineage restricted progenitor cell | 4.72e-27 | 66 |
defensive cell | 1.17e-25 | 48 |
phagocyte | 1.17e-25 | 48 |
classical monocyte | 1.15e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-21 | 42 |
leukocyte | 2.29e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 2.52e-15 | 120 |
nongranular leukocyte | 1.67e-14 | 115 |
mesenchymal cell | 1.87e-14 | 354 |
myeloid cell | 2.83e-14 | 108 |
common myeloid progenitor | 2.83e-14 | 108 |
connective tissue cell | 9.73e-14 | 361 |
multi fate stem cell | 1.72e-10 | 427 |
motile cell | 2.26e-10 | 386 |
somatic stem cell | 7.91e-10 | 433 |
hematopoietic stem cell | 3.96e-09 | 168 |
hematopoietic oligopotent progenitor cell | 7.80e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.80e-09 | 161 |
hematopoietic cell | 2.36e-08 | 177 |
stem cell | 5.31e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 2.26e-24 | 100 |
hematopoietic system | 3.08e-24 | 98 |
blood island | 3.08e-24 | 98 |
bone element | 3.36e-24 | 82 |
hemolymphoid system | 4.10e-24 | 108 |
bone marrow | 8.24e-24 | 76 |
skeletal element | 3.64e-23 | 90 |
immune system | 1.96e-22 | 93 |
musculoskeletal system | 7.35e-15 | 167 |
connective tissue | 6.53e-14 | 371 |
lateral plate mesoderm | 2.95e-07 | 203 |