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FFCP PHASE1:Hg19::chr4:53617723..53617731,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:53617723..53617731,-
|DHSsupport=supported 
|short_description=p5@ERVMER34-1
|DPIdataset=robust
|description=CAGE_peak_5_at_ERVMER34-1_5end
|association_with_transcript=21bp_to_ENST00000454756_5end
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=42970
|HGNC=42970
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=21bp_to_ENST00000454756_5end
|cluster_id=chr4:53617723..53617731,-
|coexpression_cluster_id=C1586
|description=CAGE_peak_5_at_ERVMER34-1_5end
|id=chr4:53617723..53617731,-
|ontology_enrichment_celltype=CL:0000039!8.70e-08!7;CL:0000586!8.70e-08!7;CL:0000313!3.13e-07!1
|ontology_enrichment_celltype_v019=CL:0000313;1.88e-50;1!CL:0000039;3.40e-29;7!CL:0000586;3.40e-29;7!CL:0000159;4.90e-26;2!CL:0002253;9.18e-26;2!CL:0002563;1.29e-13;4
|ontology_enrichment_celltype_v019_2=CL:0000313,2.42e-50,1;CL:0000039,3.16e-29,7;CL:0000586,3.16e-29,7;CL:0000159,5.56e-26,2;CL:0002253,9.18e-26,2;CL:0002563,1.29e-13,4
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:1749!1.12e-09!14;DOID:2152!3.13e-07!1;DOID:0050619!4.43e-07!1;DOID:1357!4.43e-07!1
|ontology_enrichment_disease_v019=DOID:2152;1.88e-50;1!DOID:3095;4.43e-10;22!DOID:2994;4.43e-10;22!DOID:299;5.60e-09;25
|ontology_enrichment_disease_v019_2=DOID:2152,2.42e-50,1;DOID:3095,4.33e-10,22;DOID:2994,4.33e-10,22;DOID:299,5.71e-09,25
|ontology_enrichment_uberon=UBERON:0004911!3.13e-07!1;UBERON:0001764!4.43e-07!1;UBERON:0001825!4.43e-07!1
|ontology_enrichment_uberon_v019=UBERON:0004911;1.88e-50;1!UBERON:0004909;4.90e-26;2!UBERON:0001052;1.29e-13;4!UBERON:0001242;1.29e-13;4!UBERON:0001262;1.29e-13;4!UBERON:0004786;1.29e-13;4!UBERON:0004808;1.29e-13;4!UBERON:0001277;1.29e-13;4!UBERON:0004907;3.60e-11;5!UBERON:0000485;2.35e-08;7!UBERON:0003929;2.35e-08;7!UBERON:0003350;1.80e-07;8!UBERON:0001155;8.85e-07;9
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.42e-50,1;UBERON:0004909,5.56e-26,2;UBERON:0001052,1.29e-13,4;UBERON:0001242,1.29e-13,4;UBERON:0001262,1.29e-13,4;UBERON:0004786,1.29e-13,4;UBERON:0004808,1.29e-13,4;UBERON:0001277,1.29e-13,4;UBERON:0004907,3.60e-11,5;UBERON:0003350,1.80e-07,8;UBERON:0001155,8.85e-07,9;UBERON:0000485,8.85e-07,9
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|short_description=p5@ERVMER34-1
}}
}}

Latest revision as of 00:03, 18 September 2015

Short description:p5@ERVMER34-1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_ERVMER34-1_5end
Coexpression cluster:C1586_choriocarcinoma_serous_maxillary_colon_small_Prostate_H9
Association with transcript: 21bp_to_ENST00000454756_5end
EntrezGene:NA
HGNC: 42970
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data