FFCP PHASE1:Hg19::chr6:31763634..31763645,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:31763634..31763645,-
|short_description=p11@VARS
|description=CAGE_peak_11_at_VARS_5end
|association_with_transcript=66bp_to_NM_006295,uc003nxe.2,uc011doi....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7407 | |EntrezGene=7407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12651 | |HGNC=12651 | ||
|TSSclassifier=strong | |||
|UniProt=P26640 | |UniProt=P26640 | ||
|association_with_transcript=66bp_to_NM_006295,uc003nxe.2,uc011doi.1_5end | |||
|cluster_id=chr6:31763634..31763645,- | |||
|description=CAGE_peak_11_at_VARS_5end | |||
|id=chr6:31763634..31763645,- | |||
|ontology_enrichment_celltype=CL:0000066!1.59e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002554;5.93e-17;2!CL:0002363;5.93e-17;2!CL:0002591;2.44e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,2.44e-17,2;CL:0002363,7.61e-17,2;CL:0000008,7.61e-17,2;CL:0002591,4.87e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000008;5.93e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;5.93e-17;2!UBERON:0001777;5.93e-17;2!UBERON:0003891;6.20e-09;4!UBERON:0000964;6.20e-09;4!UBERON:0010409;6.20e-09;4!UBERON:0010313;9.69e-08;10!UBERON:0002185;2.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,7.61e-17,2;UBERON:0001777,7.61e-17,2;UBERON:0003891,7.00e-09,4;UBERON:0000964,7.00e-09,4;UBERON:0010409,7.00e-09,4;UBERON:0004348,7.00e-09,4;UBERON:0005427,7.00e-09,4;UBERON:0010313,1.27e-07,10;UBERON:0002342,1.27e-07,10;UBERON:0005062,1.27e-07,10;UBERON:0002185,2.43e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.737201809504527,0.697801167972428,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0.492484232307152,0.408001382488506,0,0,0.136874425072884,0,0.152826811495903,0.328402357799783,0.0787107813136792,0,0,0.154816123316076,0,1.50602959389125,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.327447688744282,0.728590576585084,0.370784442784429,0.649094787309367,0.174129737299267,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0,0,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0.937285727335186,0.312160076830321,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0.204154171254893,0.122834317311768,0.206651562351531,0,0,1.82032272387605,1.43723628363248,0.505008341862199,0.250237039743928,0.554128230968366,0,0,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0.403008392910561,0,0.57978255948989,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0,0.441175890929576,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,1.96565443335525,0,0,0.491953754172454,0.343135620597051,0.98775256867763,0,0.301586917234893,0.0925884451585296,1.62904152655162,1.03993478527958,1.44331342025273,0,0,0.144366447761074,0,0,0,0.858486162094873,0,0.468008530278475,0.445893486866185,0.93733833986777,0.335964256397719,0.141775097242386,0.626909658919938,0.581267877027924,0,0,0.176096868026452,0,0,0.12624243342638,0.126995788584338,0.763976851116555,0,0,0.205654985406647,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.799266537048298,0,0.542621605391443,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,1.14861935834114,0,0.434343920002738,0.61642896765115,0,0.224170287987055,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,2.65690239414175,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.0821271560138091,0.519254429183621,0.813472649219715,0.241718899183244,0.200506470303285,0.184161977871793,0.229628896329213,0.546273504020151,0.262248829918848,0.902399225814824,0,2.35304930753057,0,0.211103257785751,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0,0.412164046590889,0.183138929636687,0.165018999841176,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.429680979473094,0,0.255679882248303,0.267096106940212,0.165284915360978,0.192190067365106,0.510450849978337,0.30347334256665,0.929691098594572,0.31481234683064,0,0,1.06461206063404,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0.511795582622668,1.28381696410176,0,0.78494864019923,0.179872457583315,0.54907405947211,0.353437207037059,0.404364963146632,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,0,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.980160863924127,0.185803175125719,0,0,0,0.399158742865633,0,0,0.324621940274555,0,0,0.313359791546046,0,0,0.963528450622197,0,0.851692475380653,0,0,0,0.333698283423817,0.586164286206121,0.278406173895242,0,0,0,1.4098700508785,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,0,0,0.16480387422676,1.47787785689595,0,0,0.503865495708552,0.102268682502155,0.492339221844278,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0.21787692703798,0.278847488557207,0.0769502585037971,0,0,0,0.108647371922008,0,0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| ||
|short_description=p11@VARS | |||
}} | }} |
Latest revision as of 00:03, 18 September 2015
Short description: | p11@VARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_VARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_NM_006295, uc003nxe.2, uc011doi.1_5end |
EntrezGene: | VARS |
HGNC: | 12651 |
UniProt: | P26640 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 2.44e-17 | 2 |
keratocyte | 7.61e-17 | 2 |
migratory cranial neural crest cell | 7.61e-17 | 2 |
smooth muscle cell of the pulmonary artery | 4.87e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 7.61e-17 | 2 |
substantia propria of cornea | 7.61e-17 | 2 |
stroma | 7.00e-09 | 4 |
cornea | 7.00e-09 | 4 |
eye surface | 7.00e-09 | 4 |
optic eminence | 7.00e-09 | 4 |
corneal primordium | 7.00e-09 | 4 |
neural crest-derived structure | 1.27e-07 | 10 |
neural crest | 1.27e-07 | 10 |
neural fold | 1.27e-07 | 10 |
bronchus | 2.43e-07 | 5 |