FFCP PHASE1:Hg19::chr17:77023696..77023719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=A8MTB1 | |UniProt=A8MTB1 | ||
|association_with_transcript=-13bp_to_ENST00000397571,uc002jwo.2_5end | |association_with_transcript=-13bp_to_ENST00000397571,uc002jwo.2_5end | ||
|cluster_id=chr17:77023696..77023719,- | |||
|description=CAGE_peak_1_at_ENST00000397571_5end,CAGE_peak_1_at_uc002jwo.2_5end | |description=CAGE_peak_1_at_ENST00000397571_5end,CAGE_peak_1_at_uc002jwo.2_5end | ||
|id=chr17:77023696..77023719,- | |id=chr17:77023696..77023719,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.28e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.20e-12;11!UBERON:0009497;1.95e-10;13!UBERON:0003104;1.33e-09;31!UBERON:0004872;6.39e-08;7!UBERON:0004140;4.08e-07;1!UBERON:0003124;4.32e-07;1!UBERON:0010227;6.06e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!9.16e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.12e-11!9;UBERON:0007100!4.02e-11!27;UBERON:0001048!1.88e-10!168;UBERON:0000948!2.11e-08!24;UBERON:0005498!2.11e-08!24;UBERON:0004140!2.11e-08!24;UBERON:0009881!2.11e-08!24;UBERON:0004141!2.11e-08!24;UBERON:0003084!2.11e-08!24;UBERON:0007005!2.11e-08!24;UBERON:0004139!2.11e-08!24;UBERON:0004291!2.11e-08!24;UBERON:0004458!3.98e-08!49;UBERON:0000992!1.95e-07!13;UBERON:0002323!2.43e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.46e-14;9!UBERON:0001557;2.46e-14;9!UBERON:0007100;1.15e-12;25!UBERON:0000948;2.45e-08;22!UBERON:0003978;6.69e-08;3!UBERON:0000946;6.69e-08;3!UBERON:0002107;4.78e-07;19!UBERON:0006925;4.78e-07;19!UBERON:0002079;6.06e-07;1!UBERON:0001282;6.06e-07;1!UBERON:0009842;6.06e-07;1!UBERON:0003704;6.06e-07;1!UBERON:0001171;6.06e-07;1!UBERON:0001172;6.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.90e-14,9;UBERON:0007100,1.04e-11,27;UBERON:0003978,3.19e-08,3;UBERON:0009751,3.19e-08,3;UBERON:0000946,3.19e-08,3;UBERON:0002523,3.19e-08,3;UBERON:0005983,3.19e-08,3;UBERON:0002165,3.19e-08,3;UBERON:0002062,3.19e-08,3;UBERON:0007280,3.19e-08,3;UBERON:0000948,1.23e-07,24;UBERON:0005498,1.23e-07,24;UBERON:0004140,1.23e-07,24;UBERON:0009881,1.23e-07,24;UBERON:0004141,1.23e-07,24;UBERON:0003084,1.23e-07,24;UBERON:0007005,1.23e-07,24;UBERON:0004139,1.23e-07,24;UBERON:0004291,1.23e-07,24;UBERON:0004797,2.47e-07,7;UBERON:0002107,5.60e-07,19;UBERON:0006925,5.60e-07,19;UBERON:0008836,5.60e-07,19;UBERON:0001048,6.64e-07,160;UBERON:0002079,6.80e-07,1;UBERON:0001282,7.19e-07,1;UBERON:0009842,7.19e-07,1;UBERON:0003704,7.19e-07,1;UBERON:0001171,7.19e-07,1;UBERON:0001172,7.19e-07,1;UBERON:0002135,7.60e-07,1 | |||
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| ||
|short_description=p1@ENST00000397571,p1@uc002jwo.2 | |short_description=p1@ENST00000397571,p1@uc002jwo.2 | ||
}} | }} |
Latest revision as of 00:01, 18 September 2015
Short description: | p1@ENST00000397571, p1@uc002jwo.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000397571_5end, CAGE_peak_1_at_uc002jwo.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000397571, uc002jwo.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.90e-14 | 9 |
primary circulatory organ | 1.04e-11 | 27 |
valve | 3.19e-08 | 3 |
cardiac mesenchyme | 3.19e-08 | 3 |
cardial valve | 3.19e-08 | 3 |
tunica intima | 3.19e-08 | 3 |
heart layer | 3.19e-08 | 3 |
endocardium | 3.19e-08 | 3 |
endocardial cushion | 3.19e-08 | 3 |
presumptive endocardium | 3.19e-08 | 3 |
heart | 1.23e-07 | 24 |
primitive heart tube | 1.23e-07 | 24 |
primary heart field | 1.23e-07 | 24 |
anterior lateral plate mesoderm | 1.23e-07 | 24 |
heart tube | 1.23e-07 | 24 |
heart primordium | 1.23e-07 | 24 |
cardiac mesoderm | 1.23e-07 | 24 |
cardiogenic plate | 1.23e-07 | 24 |
heart rudiment | 1.23e-07 | 24 |
blood vessel layer | 2.47e-07 | 7 |
liver | 5.60e-07 | 19 |
digestive gland | 5.60e-07 | 19 |
liver bud | 5.60e-07 | 19 |
primordium | 6.64e-07 | 160 |
left cardiac atrium | 6.80e-07 | 1 |
intralobular bile duct | 7.19e-07 | 1 |
acinus | 7.19e-07 | 1 |
intrahepatic bile duct | 7.19e-07 | 1 |
portal lobule | 7.19e-07 | 1 |
hepatic acinus | 7.19e-07 | 1 |
mitral valve | 7.60e-07 | 1 |