FFCP PHASE1:Hg19::chr5:43040442..43040486,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=33463 | |||
|TSSclassifier=strong | |||
|UniProt=Q3ZCQ2 | |||
|association_with_transcript=0bp_to_NM_001014279,uc003jnf.2_5end | |||
|cluster_id=chr5:43040442..43040486,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_C5orf39_5end | |||
|id=chr5:43040442..43040486,- | |||
|ontology_enrichment_celltype=CL:0000988!2.00e-28!182;CL:0000037!6.21e-28!172;CL:0000566!6.21e-28!172;CL:0002032!6.36e-25!165;CL:0000837!6.36e-25!165;CL:0000738!7.61e-23!140;CL:0002087!1.26e-22!119;CL:0002031!4.80e-22!124;CL:0000542!7.04e-22!53;CL:0000051!7.04e-22!53;CL:0000838!8.95e-22!52;CL:0000084!1.35e-15!25;CL:0000827!1.35e-15!25;CL:0000791!6.59e-13!18;CL:0000789!6.59e-13!18;CL:0002420!6.59e-13!18;CL:0002419!6.59e-13!18;CL:0000790!6.59e-13!18;CL:0000625!9.22e-09!11;CL:0000236!6.26e-08!14;CL:0000763!9.92e-08!112;CL:0000049!9.92e-08!112;CL:0000945!9.79e-07!24;CL:0000826!9.79e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.90e-24;25!CL:0000791;8.84e-21;18!CL:0000789;8.84e-21;18!CL:0002419;8.84e-21;18!CL:0000542;1.97e-19;53!CL:0000625;9.52e-14;11!CL:0000236;1.05e-12;13!CL:0002087;1.55e-09;104!CL:0000945;4.81e-08;24!CL:0000624;7.92e-08;6!CL:0000988;9.30e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.69e-34,177;CL:0000037,2.22e-34,168;CL:0000738,5.50e-32,136;CL:0000838,2.21e-31,52;CL:0002031,6.59e-31,120;CL:0000542,1.80e-30,53;CL:0000051,1.80e-30,53;CL:0002032,7.79e-30,161;CL:0000837,7.79e-30,161;CL:0002087,1.21e-29,115;CL:0000084,5.52e-24,25;CL:0000827,5.52e-24,25;CL:0000791,9.60e-21,18;CL:0000789,9.60e-21,18;CL:0002420,9.60e-21,18;CL:0002419,9.60e-21,18;CL:0000790,9.60e-21,18;CL:0000625,9.85e-14,11;CL:0000236,1.68e-11,14;CL:0000945,5.77e-08,24;CL:0000826,5.77e-08,24;CL:0000624,8.15e-08,6;CL:0000763,2.30e-07,108;CL:0000049,2.30e-07,108;CL:0000839,9.18e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;8.84e-21;18!CL:0000051;1.97e-19;53 | |||
|ontology_enrichment_disease=DOID:2531!3.35e-09!51;DOID:0060083!3.35e-09!51;DOID:1240!5.62e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.53e-14!112;UBERON:0002390!9.42e-12!102;UBERON:0003061!9.42e-12!102;UBERON:0000178!7.67e-09!15;UBERON:0000179!7.67e-09!15;UBERON:0000463!7.67e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.01e-12;15!UBERON:0000179;3.01e-12;15!UBERON:0000463;3.01e-12;15!UBERON:0002390;4.66e-10;32!UBERON:0002193;6.13e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.12e-18,108;UBERON:0002390,1.04e-15,98;UBERON:0003061,1.04e-15,98;UBERON:0000178,1.78e-12,15;UBERON:0000179,1.78e-12,15;UBERON:0000463,1.78e-12,15;UBERON:0002405,2.34e-10,93 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.492484232307152,0.408001382488506,0,0.286235987131057,0.547497700291537,0.376627918784408,0.229240217243854,0.410502947249729,0.236132343941038,5.11373559903575,9.97956435052753,2.32224184974114,0,0.30120591877825,0.369754010166788,3.25362242437267,0.995184627411951,2.34880351467878,1.66198622559563,2.60707781711184,0.434021741431704,0.895661896959697,3.2389366601898,0.515151135268373,0.145398238779565,0.755751887377619,0.485168122375632,0.232429036905685,0,0,3.16461631554365,2.56160706529101,4.49316236788312,0,0.645484683583826,1.35426486594342,0.188242339542605,0,0.674170453335254,0,0.962787081228281,0.639337125799041,2.30895910130701,5.18605509816243,3.40979800426155,0.290209238628584,0,0,2.76373531782418,1.5644487552606,3.69221035998698,1.21079900526674,1.84138817993782,0,2.11255286311942,2.12604299965044,2.30624510059213,1.23561494261145,1.50176892841506,0.803627933485401,3.99017841237748,2.58591680358817,3.83594722905731,17.5996244461323,26.7607919518444,27.5747868697702,14.0820973446947,27.6273231054849,32.1861366374511,26.4417949113945,25.7594513724548,10.8150464130795,9.39579502993502,5.3518251937532,6.60856642895129,3.92355994087075,3.423993102076,6.09800287352883,7.46720449223413,10.485676448975,15.3811575759424,44.3254282621683,33.1413464014313,42.8618802497405,13.0350234555653,12.9626599288928,15.9504404100207,14.3526047795458,12.0405840542135,12.0955193230687,10.8529017038426,13.5411508715066,6.95527405764126,31.1401782640327,24.8812970123433,30.3153019034433,8.49820070231746,19.544245173698,16.1504899376836,16.1932602892482,30.5822797751133,33.2052561466773,34.2162736001415,20.4782161945771,27.3891347870455,29.983374372563,32.4384835300303,30.3817358860787,7.4594494993151,5.88368430723716,8.39981542520234,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.378139268656271,0,0.263504357079378,0.261958150995425,0.364295288292542,0.370784442784429,0,0.696518949197069,0.132957960518865,1.66943437013739,1.14398982156026,3.34311751196608,0,1.72046919021225,0,0,0.419499436209906,0.550236083880135,0.626984899610432,1.03366703667732,1.42306505074684,1.67360306382335,1.20848795132744,3.04108842287405,0.488124115096339,1.47065232138347,0,1.51809538082936,0.44905874525234,0.337834441449967,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.404132016209064,0.817309515567294,0.454072282934794,0,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,1.52664848236894,0.161872944368132,0,0.408308342509787,1.10550885580591,0.413303124703062,1.18800285728205,0,0.910161361938026,0,0.336672227908132,0.250237039743928,0,0,0,0.150238058906597,0,0.179389635688862,0,0.847727604638247,0,0.309157587715317,0.772921620136887,0,0.168776332241266,0.292311015483596,0.504867548488229,0.184099797284599,0.323292113637624,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.591534000199219,0.842923450390509,0.723033089650446,0.992645754591546,0.217879444092406,0.474541238222193,0.269662616320329,0,0,2.21446636387394,0,0,0,0,0.982827216677626,0,18.5414501754153,0.737930631258681,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0,0.721832238805369,1.85194205030644,1.14152491340759,1.58040879591855,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,4.22632483263485,9.74442143041629,10.6648765528551,14.0129101103282,0.063497894292169,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,3.57656445851882,0,0.26593811658487,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.537182889719687,4.59549090373462,6.5020150866636,9.9188684435378,5.90377966886842,0,0,0,0,0,0,0,0.828831026872071,0.36807447515742,1.50051156317903,0.271265023699736,0,0,0,0,0.601892199455438,0,0,0,0,0.347534457872331,1.37060810223918,0.686286847621712,3.3082884179662,3.8828556147351,4.802740101155,1.21251028578504,0,0,0,0.460385919864187,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.116210378459959,1.20859449591622,0,0.184161977871793,0.229628896329213,0,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0.211103257785751,3.4120015221269,2.04112446331819,0.863663664408557,4.62681758070868,1.35473218771926,0,0.254876273045038,0,0.223874754722178,1.53481913652154,1.8300481571743,0,0.984043937099117,0.650756789328606,0.618246069886334,1.73981983154852,1.32015199872941,0,0,0,0.773365746336976,0.770243085573222,0.460511024178389,0.137836572484531,0.537101224341368,0.145016693914229,0.426133137080504,0.178064071293475,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0.255897791311334,0.42793898803392,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.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| |||
|short_description=p2@C5orf39 | |||
}} |
Latest revision as of 23:59, 17 September 2015
Short description: | p2@C5orf39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C5orf39_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_NM_001014279, uc003jnf.2_5end |
EntrezGene: | C5orf39 |
HGNC: | 33463 |
UniProt: | Q3ZCQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.69e-34 | 177 |
hematopoietic stem cell | 2.22e-34 | 168 |
leukocyte | 5.50e-32 | 136 |
lymphoid lineage restricted progenitor cell | 2.21e-31 | 52 |
hematopoietic lineage restricted progenitor cell | 6.59e-31 | 120 |
lymphocyte | 1.80e-30 | 53 |
common lymphoid progenitor | 1.80e-30 | 53 |
hematopoietic oligopotent progenitor cell | 7.79e-30 | 161 |
hematopoietic multipotent progenitor cell | 7.79e-30 | 161 |
nongranular leukocyte | 1.21e-29 | 115 |
T cell | 5.52e-24 | 25 |
pro-T cell | 5.52e-24 | 25 |
mature alpha-beta T cell | 9.60e-21 | 18 |
alpha-beta T cell | 9.60e-21 | 18 |
immature T cell | 9.60e-21 | 18 |
mature T cell | 9.60e-21 | 18 |
immature alpha-beta T cell | 9.60e-21 | 18 |
CD8-positive, alpha-beta T cell | 9.85e-14 | 11 |
B cell | 1.68e-11 | 14 |
lymphocyte of B lineage | 5.77e-08 | 24 |
pro-B cell | 5.77e-08 | 24 |
CD4-positive, alpha-beta T cell | 8.15e-08 | 6 |
myeloid cell | 2.30e-07 | 108 |
common myeloid progenitor | 2.30e-07 | 108 |
myeloid lineage restricted progenitor cell | 9.18e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.12e-18 | 108 |
hematopoietic system | 1.04e-15 | 98 |
blood island | 1.04e-15 | 98 |
blood | 1.78e-12 | 15 |
haemolymphatic fluid | 1.78e-12 | 15 |
organism substance | 1.78e-12 | 15 |
immune system | 2.34e-10 | 93 |