FFCP PHASE1:Hg19::chr16:79634595..79634620,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6776 | |||
|TSSclassifier=strong | |||
|UniProt=O75444 | |||
|association_with_transcript=0bp_to_ENST00000326043,ENST00000393350_5end | |||
|cluster_id=chr16:79634595..79634620,- | |||
|coexpression_cluster_id=C761 | |||
|description=CAGE_peak_2_at_MAF_5end | |||
|id=chr16:79634595..79634620,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.59e-07;18!CL:0000789;7.59e-07;18!CL:0002419;7.59e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.03e-07,18;CL:0000789,5.03e-07,18;CL:0002420,5.03e-07,18;CL:0002419,5.03e-07,18;CL:0000790,5.03e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;7.59e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.90e-33!115;UBERON:0005743!9.04e-13!86;UBERON:0001049!1.26e-12!57;UBERON:0005068!1.26e-12!57;UBERON:0006241!1.26e-12!57;UBERON:0007135!1.26e-12!57;UBERON:0001017!2.28e-12!82;UBERON:0003080!5.02e-11!42;UBERON:0002616!7.55e-11!59;UBERON:0002780!1.85e-10!41;UBERON:0001890!1.85e-10!41;UBERON:0006240!1.85e-10!41;UBERON:0000955!4.06e-10!69;UBERON:0006238!4.06e-10!69;UBERON:0001893!4.36e-10!34;UBERON:0002020!5.03e-10!34;UBERON:0003528!5.03e-10!34;UBERON:0002791!6.11e-10!33;UBERON:0003075!7.13e-10!86;UBERON:0007284!7.13e-10!86;UBERON:0000153!8.67e-10!129;UBERON:0007811!8.67e-10!129;UBERON:0000073!1.00e-09!94;UBERON:0001016!1.00e-09!94;UBERON:0001869!2.93e-09!32;UBERON:0002619!4.43e-09!22;UBERON:0002346!1.32e-08!90;UBERON:0003056!1.94e-08!61;UBERON:0001950!2.60e-08!20;UBERON:0000033!2.89e-08!123;UBERON:0000956!5.98e-08!25;UBERON:0000203!5.98e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.74e-10;22!UBERON:0001950;3.65e-09;20!UBERON:0007023;4.00e-09;114!UBERON:0002791;9.39e-09;32!UBERON:0001893;1.27e-08;34!UBERON:0003528;1.50e-08;34!UBERON:0002020;1.50e-08;34!UBERON:0001869;1.71e-08;32!UBERON:0002780;1.80e-08;41!UBERON:0001890;1.80e-08;41!UBERON:0000956;7.98e-08;25!UBERON:0000203;7.98e-08;25!UBERON:0000073;6.73e-07;53!UBERON:0002616;6.73e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.68e-36,114;UBERON:0001049,6.36e-13,56;UBERON:0005068,6.36e-13,56;UBERON:0006241,6.36e-13,56;UBERON:0007135,6.36e-13,56;UBERON:0001017,9.75e-12,81;UBERON:0000073,2.22e-11,53;UBERON:0002616,2.22e-11,53;UBERON:0002780,5.24e-11,41;UBERON:0001890,5.24e-11,41;UBERON:0003080,5.24e-11,41;UBERON:0006240,5.24e-11,41;UBERON:0003075,1.37e-10,82;UBERON:0007284,1.37e-10,82;UBERON:0001893,2.47e-10,34;UBERON:0003528,2.88e-10,34;UBERON:0002020,2.88e-10,34;UBERON:0002619,3.82e-10,22;UBERON:0002791,8.76e-10,32;UBERON:0000955,1.19e-09,68;UBERON:0006238,1.19e-09,68;UBERON:0001869,2.06e-09,32;UBERON:0001950,2.88e-09,20;UBERON:0002346,3.61e-09,86;UBERON:0001016,4.38e-09,89;UBERON:0003056,1.67e-08,61;UBERON:0000956,6.70e-08,25;UBERON:0000203,6.70e-08,25;UBERON:0010371,9.48e-08,104;UBERON:0011216,9.57e-08,223 | |||
|phase1_expression=2.72517568905835,4.49611100171065,5.21531295155093,0,2.23480547213644,2.61701557230111,0,0.631719873426831,5.48489819219661,0.245733936501509,0.697801167972428,0,0.263766978228454,4.20805600064159,1.98838425436749,0,0,0,0,0.61560529038394,0,1.88072832886853,0.286235987131057,0.684372125364421,0.502170558379211,0,0,0,6.29382842958246,7.67658796194425,2.78669021968937,0.919421224478927,1.50602959389125,0.369754010166788,0,0,0.293600439334847,0.553995408531877,3.60980005446255,6.07630438004385,61.8006708902191,40.4867082523724,72.6363100728406,0.872389432677388,0.377875943688809,0,2.09186133215116,0.822335776043652,2.16794459626573,24.4538533473828,56.3553554364021,22.4658118394156,2.41321976515633,3.22742341791913,0,0.564727018627814,1.36453075028923,0.674170453335254,1.53041946185451,2.24650318953266,1.91801137739712,32.3254274182982,59.6396336288679,23.8685860298309,0,0.56738522469114,1.24564449799115,31.1548344918362,55.7986722709615,30.8408159481266,1.21079900526674,1.10483290796269,0.316462387440884,0.211255286311942,0.850417199860174,0.209658645508376,0.561643155732475,0.300353785683013,0.48217676009124,0.570025487482497,0.99458338599545,1.27864907635244,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,1.68152568894461,0,8.26181034478099,22.4016134767024,24.0553753829426,21.0654984192254,1.95553359980154,0.473447805734733,1.94826728407911,53.3656088479981,17.3817485410154,22.3749233529457,18.9562704635511,103.497786338346,105.218012175941,12.4972807498794,12.4357508003632,4.92665245749589,0.741432815810302,1.07016331235885,1.04535523804977,22.6618685395132,10.3469533272519,20.6176467289578,28.5912251982038,10.5126586726952,3.90650072313851,2.85135613334512,4.9689789295665,3.71161172347813,3.74792179657038,11.6020853501568,9.03240796613151,12.7012248231581,11.2324882229073,10.5721814834443,14.6284119788377,4.69490601792545,0.383587685530591,5.42158728576849,2.50668955317945,9.70471677037519,2.3858578411533,4.86634870302636,4.91581049253153,2.4390233720882,2.45937399940753,23.248785900844,0.728590576585084,2.59549109949101,9.7364218096405,15.6716763569341,14.2265017755186,0,0,0,0,0,0,0,0,0,0,0,0,1.33888245105868,3.22263453687318,5.32190474002959,6.58967555380058,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.183201743930407,3.9534125230819,0,3.05265836499774,1.49091585508596,0,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,1.8672662123986,0.134710672069688,0,0.908144565869588,4.03323147135999,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0,0.619954687054593,1.18800285728205,4.69807165629258,0,0,0.168336113954066,0.500474079487857,0,1.75591048352335,1.5324389789951,4.35690370829131,0,0.89694817844431,3.84403299873421,0.211931901159562,0,0,0,0.37223371266318,0,0,0,0.460249493211497,0.80823028409406,0,0.302256294682921,0.508681776931463,2.89891279744945,4.09119180886252,0,0.975789649036763,0.927708378250397,2.90484857173796,4.66474747569167,2.77552935963191,0.36497735907583,0,1.28648187638577,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,8.11971000087113,0,1.6462960453256,4.41026134156626,5.07020139287323,3.9313088667105,28.3579155207074,0,4.79654910318143,2.74508496477641,3.62175941848464,0,0.603173834469785,5.83307204498736,0,0,0,7.88326753830522,3.63966952131047,3.3204282985047,1.38895653772983,2.28304982681518,0,0,25.8527856391767,2.57404691653161,9.51239438647861,0.93733833986777,2.51973192298289,2.41017665312057,0.358234090811393,0.871901815541886,0.383382679165211,1.97065295158377,7.48411689112421,2.07328115540772,4.61183850934277,2.39860623510122,2.47641787739459,3.4378958300245,0,5.13217338068116,2.36503233217644,2.40274446275134,6.85983438313388,0.224262168690721,0.43596006883328,0.36669142910475,1.55126058909333,0,0,0,0,0.257207374262142,0,0.266422179016099,0.857867961948885,1.62786481617433,0,0,0.355391948742546,0,14.4690900988601,1.74306691720059,8.59767724165691,8.51366464488333,24.1083403887421,14.7583757638122,0.239624855491583,0,1.42636905040718,0,2.67119219315498,1.79060963239896,2.4658731678576,9.65450724989443,17.4658335636209,11.6792163014571,4.57370323600434,3.90419561572865,6.95959931499926,6.03058555203656,9.56908127479745,0.749007023947182,0,2.90090859405225,4.78496817704646,5.50187573165645,0.813795071099207,0.623912584592421,0.892144943985809,0.157702415033935,0.585707074963566,2.70851489754947,15.9185252839189,3.10419213877515,0,0.553107505625109,4.08352987999989,6.06983588134496,3.77457766191941,3.72182447021197,5.60856922128404,6.5103810260101,0,0,0.30239029332968,0.744323423456331,0.767309866440312,1.96462066103151,4.61300937320523,0.511707249066704,1.44768529029247,0,0,0.177561725313127,0,0,0.232420756919918,1.20859449591622,2.6065841139427,1.65745780084613,0.34444334449382,0,0.393373244878272,0.451199612907412,1.00119938235739,0,0,0.73886140225013,0,0.850468526382578,2.59099099322567,0,2.16757150035082,3.01013864312912,0,0,0.447749509444357,0,0,2.82095137628028,2.29610251989794,0.65075678932860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| |||
|short_description=p2@MAF | |||
}} |
Latest revision as of 23:52, 17 September 2015
Short description: | p2@MAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAF_5end |
Coexpression cluster: | C761_myeloma_CD14_small_CD4_colon_duodenum_lymph |
Association with transcript: | 0bp_to_ENST00000326043, ENST00000393350_5end |
EntrezGene: | MAF |
HGNC: | 6776 |
UniProt: | O75444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.03e-07 | 18 |
alpha-beta T cell | 5.03e-07 | 18 |
immature T cell | 5.03e-07 | 18 |
mature T cell | 5.03e-07 | 18 |
immature alpha-beta T cell | 5.03e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.68e-36 | 114 |
neural tube | 6.36e-13 | 56 |
neural rod | 6.36e-13 | 56 |
future spinal cord | 6.36e-13 | 56 |
neural keel | 6.36e-13 | 56 |
central nervous system | 9.75e-12 | 81 |
regional part of nervous system | 2.22e-11 | 53 |
regional part of brain | 2.22e-11 | 53 |
regional part of forebrain | 5.24e-11 | 41 |
forebrain | 5.24e-11 | 41 |
anterior neural tube | 5.24e-11 | 41 |
future forebrain | 5.24e-11 | 41 |
neural plate | 1.37e-10 | 82 |
presumptive neural plate | 1.37e-10 | 82 |
telencephalon | 2.47e-10 | 34 |
brain grey matter | 2.88e-10 | 34 |
gray matter | 2.88e-10 | 34 |
regional part of cerebral cortex | 3.82e-10 | 22 |
regional part of telencephalon | 8.76e-10 | 32 |
brain | 1.19e-09 | 68 |
future brain | 1.19e-09 | 68 |
cerebral hemisphere | 2.06e-09 | 32 |
neocortex | 2.88e-09 | 20 |
neurectoderm | 3.61e-09 | 86 |
nervous system | 4.38e-09 | 89 |
pre-chordal neural plate | 1.67e-08 | 61 |
cerebral cortex | 6.70e-08 | 25 |
pallium | 6.70e-08 | 25 |
ecto-epithelium | 9.48e-08 | 104 |
organ system subdivision | 9.57e-08 | 223 |