FFCP PHASE1:Hg19::chr13:76056287..76056329,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:76056287..76056329,-
|short_description=p1@TBC1D4
|description=CAGE_peak_1_at_TBC1D4_5end
|association_with_transcript=-37bp_to_ENST00000377625,ENST000003...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9882 | |EntrezGene=9882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19165 | |HGNC=19165 | ||
|TSSclassifier=strong | |||
|UniProt=O60343 | |UniProt=O60343 | ||
|association_with_transcript=-37bp_to_ENST00000377625,ENST00000377636,ENST00000425511,ENST00000431480,NM_014832,uc001vjl.1,uc010aer.2,uc010aes.2_5end | |||
|cluster_id=chr13:76056287..76056329,- | |||
|description=CAGE_peak_1_at_TBC1D4_5end | |||
|id=chr13:76056287..76056329,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.62e-09!347;UBERON:0000475!7.62e-09!365;UBERON:0000483!1.52e-07!309;UBERON:0007023!1.95e-07!115;UBERON:0000119!2.02e-07!312;UBERON:0000062!2.96e-07!511;UBERON:0001007!5.06e-07!155;UBERON:0001555!5.06e-07!155;UBERON:0007026!5.06e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.82e-07,114;UBERON:0011216,5.77e-07,223 | |||
|phase1_expression=2.36181893051724,4.49611100171065,1.55049844505568,3.00219895059391,4.91657203870017,0.872338524100369,0,1.26343974685366,3.91778442299758,1.47440361900905,2.09340350391728,2.18441372130172,2.37390280405608,1.23766352960047,0.662794751455832,1.34465029290355,1.20538905604795,0,2.92759679274304,1.84681587115182,4.28401451612931,1.88072832886853,1.14494394852423,1.36874425072884,3.64073654824928,5.42535180810454,5.00813595644669,4.171671409625,1.57345710739562,0,0.464448369948228,1.83884244895785,1.8072355126695,1.10926203050036,1.23947520928483,0,1.17440175733939,1.66198622559563,0.601633342410425,1.51907609501096,1.79132379391939,0.647787332037959,2.06060454107349,0.145398238779565,0,2.18325655069035,0,0,0.619412741790207,0,0,0.236482229888585,0,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,1.27867425159808,0.329851300186716,0.598390972864896,1.27867425159808,0.290209238628584,0,0,0,0,0.65156653411535,0.605399502633369,0,0,0.633765858935825,0.637812899895131,0.628975936525128,0.786300418025466,0.901061357049038,0.964353520182481,0.285012743741249,0.39783335439818,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.334372990781356,0,0.473447805734733,0,0.445641827540694,1.17842362989935,0.443067789167242,0.270803863765016,0.512365278902701,0.650296737799391,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,1.79007586580942,1.80719576192283,1.00267582127178,1.88300474649071,0,1.45990461090791,1.98523116044542,2.66075276955077,3.68906099911129,4.45328856692223,1.82147644146271,3.33705998505986,0.97364218096405,1.74129737299267,1.99436940778298,32.9117061541372,14.2998727695032,11.8866400425461,2.98143611050058,2.58070378531837,1.38856200643038,1.13061588384802,2.51699661725944,1.92582629358047,2.50793959844173,4.39308490587859,4.26919515224052,4.35136796594071,1.61131726843659,0.760272105718513,6.83373761134875,2.94130464276695,0.81014194788176,4.19708722935175,2.69435247151404,6.86930030948266,1.53316637465883,1.89853131913626,3.11442964681692,0,0,3.92484646928281,1.98788780678127,1.64619665163954,3.44263870114369,2.0078563452417,1.41867352879343,2.24271040056923,3.20246987189115,2.22000793575444,4.04574346019696,3.23305612967251,3.10577615915572,2.8757911252537,3.45705554687999,0,2.80944069147288,1.71141546463335,4.78235777765763,4.69737994575059,4.37056949793955,4.49442581447195,3.0623125688234,3.0708579327942,3.09977343527296,7.12801714369232,0.989067717114227,0.910161361938026,2.15585442544872,2.86171393721913,4.00379263590285,2.49357703935765,1.75591048352335,2.14541457059314,2.70428506031874,1.36118619792025,4.30535125653269,2.13557388818567,2.33125091275518,5.70173082560364,2.16410311400722,3.60696756063881,0.930584281657949,6.41350062516812,1.26668106709558,4.03894038790583,2.20919756741518,1.93975268182574,5.68015348026583,2.82105875037393,1.86516651541536,2.89891279744945,3.81844568827169,4.01526433544605,7.9282908984237,6.36142887943129,3.60201222895507,5.07939169575315,5.2987378683882,2.91981887260664,7.8224766164908,3.85944562915731,2.76269842704961,3.71494342425583,3.60939740834793,4.14073800139454,2.69735504124963,4.57920956778616,2.97793726377464,3.92182999366331,3.79632990577755,2.69662616320329,2.74710051175484,2.30848294167834,8.11971000087113,4.20725321410337,2.8810180793198,1.47008711385542,5.07020139287323,2.94848165003288,6.49868897349544,0,14.1436704324581,0.857839051492628,4.60951198716227,3.37205259772859,4.02115889646523,2.59247646443883,0.651616610620649,1.03993478527958,4.3299402607582,0.463721619900307,3.52226082707465,1.15493158208859,0.925971025153221,0.570762456703795,1.58040879591855,0.858486162094873,2.46217006087397,4.68008530278475,2.82399208348584,5.62403003920662,3.02367830757947,1.41775097242386,1.79117045405697,3.77824120068151,3.83382679165211,2.95597942737566,13.2072651019839,7.25648404392702,5.18831832301061,6.9433338384509,3.42888629177713,4.20187268114105,1.17217447210047,3.4214489204541,5.55268460597947,3.00343057843917,1.71495859578347,2.01835951821649,1.30788020649984,3.5202377194056,3.10252117818667,10.7296933755565,5.917119267892,4.25500986535793,4.16029747645464,4.11531798819427,8.5109479213967,2.93064396917709,1.71573592389777,3.7983512377401,0.823240336780769,3.25736184293735,2.48774364119782,3.16780749173372,2.1100756394171,1.74306691720059,1.69954085009497,1.2162378064119,4.01805673145701,2.10833939483032,0.718874566474748,0,9.98458335285029,2.75084482668401,3.08214483825575,1.96967059563885,0.672510863961164,0,0,0.128343036279748,0,1.30139853857622,1.54657762555539,1.17261385734044,0,0,0,0,1.47229790062968,2.00068208423871,2.71265023699736,1.03985430765404,0.535286966391485,0.157702415033935,1.63997980989798,3.91229929646035,4.5481500811197,1.03473071292505,3.32112799267718,4.60922921354258,3.12781012085098,0.195801157462741,1.71571711905428,0,0.215714200818617,0.320182673410333,0.303127571446259,1.66435439510497,2.11673205330776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| ||
|short_description=p1@TBC1D4 | |||
}} | }} |
Latest revision as of 23:43, 17 September 2015
Short description: | p1@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBC1D4_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENST00000377625, ENST00000377636, ENST00000425511, ENST00000431480, NM_014832, uc001vjl.1, uc010aer.2, uc010aes.2_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | O60343 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.82e-07 | 114 |
organ system subdivision | 5.77e-07 | 223 |