FFCP PHASE1:Hg19::chr1:39670514..39670534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |EntrezGene=23499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |HGNC=13664 | ||
|TSSclassifier=strong | |||
|UniProt=B4E2T3 | |UniProt=B4E2T3 | ||
|association_with_transcript=91bp_to_ENST00000536367,uc010oit.1_5end | |association_with_transcript=91bp_to_ENST00000536367,uc010oit.1_5end | ||
|cluster_id=chr1:39670514..39670534,+ | |||
|coexpression_cluster_id=C3979 | |coexpression_cluster_id=C3979 | ||
|description=CAGE_peak_11_at_MACF1_5end | |description=CAGE_peak_11_at_MACF1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000222!1.30e-07!119 | |ontology_enrichment_celltype=CL:0000222!1.30e-07!119 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,8.61e-07,11 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.79e-16!113;UBERON:0004535!1.09e-15!110;UBERON:0004872!6.17e-13!84;UBERON:0002049!3.73e-12!79;UBERON:0007798!3.73e-12!79;UBERON:0001981!6.77e-11!60;UBERON:0007500!6.77e-11!60;UBERON:0004537!6.77e-11!60;UBERON:0006965!6.77e-11!60;UBERON:0000055!1.43e-10!69;UBERON:0003081!2.59e-08!216;UBERON:0001637!5.46e-08!42;UBERON:0003509!5.46e-08!42;UBERON:0004572!5.46e-08!42;UBERON:0007023!6.11e-08!115;UBERON:0000025!2.20e-07!194;UBERON:0000947!4.32e-07!21;UBERON:0010191!4.32e-07!21;UBERON:0003075!7.19e-07!86;UBERON:0007284!7.19e-07!86 | |ontology_enrichment_uberon=UBERON:0001009!1.79e-16!113;UBERON:0004535!1.09e-15!110;UBERON:0004872!6.17e-13!84;UBERON:0002049!3.73e-12!79;UBERON:0007798!3.73e-12!79;UBERON:0001981!6.77e-11!60;UBERON:0007500!6.77e-11!60;UBERON:0004537!6.77e-11!60;UBERON:0006965!6.77e-11!60;UBERON:0000055!1.43e-10!69;UBERON:0003081!2.59e-08!216;UBERON:0001637!5.46e-08!42;UBERON:0003509!5.46e-08!42;UBERON:0004572!5.46e-08!42;UBERON:0007023!6.11e-08!115;UBERON:0000025!2.20e-07!194;UBERON:0000947!4.32e-07!21;UBERON:0010191!4.32e-07!21;UBERON:0003075!7.19e-07!86;UBERON:0007284!7.19e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;4.52e-08;21!UBERON:0010191;4.52e-08;21!UBERON:0001637;6.58e-08;42!UBERON:0003509;6.58e-08;42!UBERON:0004572;6.58e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000947;4.52e-08;21!UBERON:0010191;4.52e-08;21!UBERON:0001637;6.58e-08;42!UBERON:0003509;6.58e-08;42!UBERON:0004572;6.58e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,3.20e-15,112;UBERON:0004535,1.20e-14,109;UBERON:0004872,3.47e-14,83;UBERON:0002049,4.52e-12,78;UBERON:0007798,4.52e-12,78;UBERON:0007500,1.59e-11,59;UBERON:0001981,1.59e-11,59;UBERON:0004537,1.59e-11,59;UBERON:0006965,1.59e-11,59;UBERON:0003081,3.43e-10,203;UBERON:0000025,1.07e-09,192;UBERON:0000055,1.85e-09,68;UBERON:0001637,2.77e-09,42;UBERON:0003509,2.77e-09,42;UBERON:0004572,2.77e-09,42;UBERON:0000947,4.34e-08,21;UBERON:0010191,4.34e-08,21;UBERON:0003914,2.01e-07,117;UBERON:0003075,4.30e-07,82;UBERON:0007284,4.30e-07,82 | |||
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| ||
|short_description=p11@MACF1 | |short_description=p11@MACF1 | ||
}} | }} |
Latest revision as of 23:32, 17 September 2015
Short description: | p11@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MACF1_5end |
Coexpression cluster: | C3979_Mast_acute_chronic_granulocyte_Fibroblast_mesodermal_epithelioid |
Association with transcript: | 91bp_to_ENST00000536367, uc010oit.1_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | B4E2T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 8.61e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 3.20e-15 | 112 |
cardiovascular system | 1.20e-14 | 109 |
splanchnic layer of lateral plate mesoderm | 3.47e-14 | 83 |
vasculature | 4.52e-12 | 78 |
vascular system | 4.52e-12 | 78 |
epithelial tube open at both ends | 1.59e-11 | 59 |
blood vessel | 1.59e-11 | 59 |
blood vasculature | 1.59e-11 | 59 |
vascular cord | 1.59e-11 | 59 |
lateral plate mesoderm | 3.43e-10 | 203 |
tube | 1.07e-09 | 192 |
vessel | 1.85e-09 | 68 |
artery | 2.77e-09 | 42 |
arterial blood vessel | 2.77e-09 | 42 |
arterial system | 2.77e-09 | 42 |
aorta | 4.34e-08 | 21 |
aortic system | 4.34e-08 | 21 |
epithelial tube | 2.01e-07 | 117 |
neural plate | 4.30e-07 | 82 |
presumptive neural plate | 4.30e-07 | 82 |