FFCP PHASE1:Hg19::chr7:26332645..26332661,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29887 | |EntrezGene=29887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14974 | |HGNC=14974 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5X0 | |UniProt=Q9Y5X0 | ||
|association_with_transcript=-12bp_to_ENST00000396376_5end | |association_with_transcript=-12bp_to_ENST00000396376_5end | ||
|cluster_id=chr7:26332645..26332661,+ | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_8_at_SNX10_5end | |description=CAGE_peak_8_at_SNX10_5end | ||
|id=chr7:26332645..26332661,+ | |id=chr7:26332645..26332661,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.96e-62!76;CL:0002194!2.10e-53!63;CL:0000576!2.10e-53!63;CL:0000040!2.10e-53!63;CL:0000559!2.10e-53!63;CL:0002009!3.47e-51!65;CL:0002057!8.59e-50!42;CL:0000839!1.12e-49!70;CL:0000557!1.05e-48!71;CL:0000860!1.93e-45!45;CL:0000763!4.17e-44!112;CL:0000049!4.17e-44!112;CL:0000738!7.42e-34!140;CL:0002087!2.47e-29!119;CL:0000037!3.27e-29!172;CL:0000566!3.27e-29!172;CL:0002032!3.87e-28!165;CL:0000837!3.87e-28!165;CL:0000988!4.29e-28!182;CL:0002031!8.70e-26!124;CL:0002393!1.62e-12!9;CL:0002397!1.62e-12!9;CL:0000094!4.91e-12!8;CL:0000081!4.75e-10!11 | |ontology_enrichment_celltype=CL:0000766!1.96e-62!76;CL:0002194!2.10e-53!63;CL:0000576!2.10e-53!63;CL:0000040!2.10e-53!63;CL:0000559!2.10e-53!63;CL:0002009!3.47e-51!65;CL:0002057!8.59e-50!42;CL:0000839!1.12e-49!70;CL:0000557!1.05e-48!71;CL:0000860!1.93e-45!45;CL:0000763!4.17e-44!112;CL:0000049!4.17e-44!112;CL:0000738!7.42e-34!140;CL:0002087!2.47e-29!119;CL:0000037!3.27e-29!172;CL:0000566!3.27e-29!172;CL:0002032!3.87e-28!165;CL:0000837!3.87e-28!165;CL:0000988!4.29e-28!182;CL:0002031!8.70e-26!124;CL:0002393!1.62e-12!9;CL:0002397!1.62e-12!9;CL:0000094!4.91e-12!8;CL:0000081!4.75e-10!11 | ||
|ontology_enrichment_celltype_v019=CL:0000576;9.32e-49;48!CL:0000860;1.27e-44;33!CL:0002057;1.27e-44;33!CL:0000473;1.07e-39;39!CL:0000234;1.07e-39;39!CL:0000766;7.82e-35;69!CL:0000094;8.65e-22;8!CL:0000763;1.09e-21;100!CL:0000081;1.97e-15;11!CL:0002393;9.25e-12;6!CL:0002397;9.25e-12;6!CL:0002087;3.24e-11;104!CL:0000775;2.68e-10;3!CL:0000738;4.14e-10;136!CL:0002619;2.35e-08;3!CL:0000767;4.17e-08;3!CL:0000988;8.35e-08;177!CL:0000771;7.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.44e-82,72;CL:0002194,7.60e-70,59;CL:0000576,7.60e-70,59;CL:0000040,7.60e-70,59;CL:0000559,7.60e-70,59;CL:0002009,3.22e-67,61;CL:0000473,2.15e-64,48;CL:0000234,2.15e-64,48;CL:0000860,1.65e-62,42;CL:0002057,1.65e-62,42;CL:0000839,2.45e-61,66;CL:0000557,2.89e-60,67;CL:0000763,5.44e-58,108;CL:0000049,5.44e-58,108;CL:0000738,1.38e-39,136;CL:0002032,1.41e-34,161;CL:0000837,1.41e-34,161;CL:0000037,3.71e-34,168;CL:0002087,2.23e-32,115;CL:0000988,9.70e-32,177;CL:0002031,7.12e-29,120;CL:0000094,1.21e-21,8;CL:0000081,2.50e-15,11;CL:0002393,1.76e-14,9;CL:0002397,1.76e-14,9;CL:0000134,4.85e-12,354;CL:0002320,1.52e-11,361;CL:0000775,2.69e-10,3;CL:0000219,8.32e-10,386;CL:0002619,1.56e-08,3;CL:0000767,5.76e-08,3;CL:0000048,1.04e-07,427;CL:0000723,2.02e-07,433;CL:0000034,4.71e-07,441;CL:0000771,7.44e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-44;42!CL:0000049;1.47e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.48e-56!102;UBERON:0003061!3.48e-56!102;UBERON:0002193!5.59e-49!112;UBERON:0002371!4.48e-41!80;UBERON:0001474!6.91e-37!86;UBERON:0002405!6.26e-31!115;UBERON:0004765!6.91e-30!101;UBERON:0001434!6.91e-30!101;UBERON:0000178!3.02e-17!15;UBERON:0000179!3.02e-17!15;UBERON:0000463!3.02e-17!15;UBERON:0003081!1.01e-15!216;UBERON:0002204!2.77e-11!167;UBERON:0007023!2.01e-10!115 | |ontology_enrichment_uberon=UBERON:0002390!3.48e-56!102;UBERON:0003061!3.48e-56!102;UBERON:0002193!5.59e-49!112;UBERON:0002371!4.48e-41!80;UBERON:0001474!6.91e-37!86;UBERON:0002405!6.26e-31!115;UBERON:0004765!6.91e-30!101;UBERON:0001434!6.91e-30!101;UBERON:0000178!3.02e-17!15;UBERON:0000179!3.02e-17!15;UBERON:0000463!3.02e-17!15;UBERON:0003081!1.01e-15!216;UBERON:0002204!2.77e-11!167;UBERON:0007023!2.01e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.13e-18;15!UBERON:0000179;5.13e-18;15!UBERON:0000463;5.13e-18;15!UBERON:0002390;7.76e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.74e-63,98;UBERON:0003061,1.74e-63,98;UBERON:0002193,2.03e-56,108;UBERON:0002371,7.16e-52,76;UBERON:0001474,2.73e-47,82;UBERON:0004765,3.99e-42,90;UBERON:0002405,2.04e-40,93;UBERON:0001434,7.95e-37,100;UBERON:0003081,6.53e-24,203;UBERON:0000178,6.72e-18,15;UBERON:0000179,6.72e-18,15;UBERON:0000463,6.72e-18,15;UBERON:0002204,1.01e-17,167;UBERON:0002384,1.43e-11,371;UBERON:0000926,6.78e-11,315;UBERON:0004120,6.78e-11,315;UBERON:0006603,6.78e-11,315 | |||
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|short_description=p8@SNX10 | |short_description=p8@SNX10 | ||
}} | }} |
Latest revision as of 23:32, 17 September 2015
Short description: | p8@SNX10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SNX10_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | -12bp_to_ENST00000396376_5end |
EntrezGene: | SNX10 |
HGNC: | 14974 |
UniProt: | Q9Y5X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.74e-63 | 98 |
blood island | 1.74e-63 | 98 |
hemolymphoid system | 2.03e-56 | 108 |
bone marrow | 7.16e-52 | 76 |
bone element | 2.73e-47 | 82 |
skeletal element | 3.99e-42 | 90 |
immune system | 2.04e-40 | 93 |
skeletal system | 7.95e-37 | 100 |
lateral plate mesoderm | 6.53e-24 | 203 |
blood | 6.72e-18 | 15 |
haemolymphatic fluid | 6.72e-18 | 15 |
organism substance | 6.72e-18 | 15 |
musculoskeletal system | 1.01e-17 | 167 |
connective tissue | 1.43e-11 | 371 |
mesoderm | 6.78e-11 | 315 |
mesoderm-derived structure | 6.78e-11 | 315 |
presumptive mesoderm | 6.78e-11 | 315 |