FFCP PHASE1:Hg19::chr19:39903290..39903349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64857 | |EntrezGene=64857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29515 | |HGNC=29515 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7P9 | |UniProt=Q9H7P9 | ||
|association_with_transcript=65bp_to_ENST00000409794_5end | |association_with_transcript=65bp_to_ENST00000409794_5end | ||
|cluster_id=chr19:39903290..39903349,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_1_at_PLEKHG2_5end | |description=CAGE_peak_1_at_PLEKHG2_5end | ||
|id=chr19:39903290..39903349,+ | |id=chr19:39903290..39903349,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.12e-17!42;CL:0000860!7.49e-14!45;CL:0000738!2.14e-12!140;CL:0002087!6.03e-12!119;CL:0002031!3.41e-09!124;CL:0002009!1.62e-08!65;CL:0000988!3.21e-08!182;CL:0002194!4.77e-08!63;CL:0000576!4.77e-08!63;CL:0000040!4.77e-08!63;CL:0000559!4.77e-08!63;CL:0000557!2.31e-07!71 | |ontology_enrichment_celltype=CL:0002057!6.12e-17!42;CL:0000860!7.49e-14!45;CL:0000738!2.14e-12!140;CL:0002087!6.03e-12!119;CL:0002031!3.41e-09!124;CL:0002009!1.62e-08!65;CL:0000988!3.21e-08!182;CL:0002194!4.77e-08!63;CL:0000576!4.77e-08!63;CL:0000040!4.77e-08!63;CL:0000559!4.77e-08!63;CL:0000557!2.31e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-18;33!CL:0002057;4.56e-18;33!CL:0000473;6.75e-11;39!CL:0000234;6.75e-11;39!CL:0000576;1.12e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.72e-17,42;CL:0002057,5.72e-17,42;CL:0000738,9.63e-14,136;CL:0002087,2.55e-13,115;CL:0000473,2.30e-12,48;CL:0000234,2.30e-12,48;CL:0002031,1.88e-10,120;CL:0002009,4.49e-10,61;CL:0002194,1.42e-09,59;CL:0000576,1.42e-09,59;CL:0000040,1.42e-09,59;CL:0000559,1.42e-09,59;CL:0000988,2.95e-09,177;CL:0000557,9.80e-09,67;CL:0000037,3.16e-07,168;CL:0000034,3.16e-07,441;CL:0000048,3.22e-07,427;CL:0000766,4.13e-07,72;CL:0000723,4.50e-07,433;CL:0000839,7.97e-07,66;CL:0002320,8.56e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.85e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.45e-11!216;UBERON:0002390!2.99e-08!102;UBERON:0003061!2.99e-08!102;UBERON:0002193!4.36e-08!112;UBERON:0002371!5.29e-07!80;UBERON:0001474!5.43e-07!86;UBERON:0002384!6.99e-07!375 | |ontology_enrichment_uberon=UBERON:0003081!1.45e-11!216;UBERON:0002390!2.99e-08!102;UBERON:0003061!2.99e-08!102;UBERON:0002193!4.36e-08!112;UBERON:0002371!5.29e-07!80;UBERON:0001474!5.43e-07!86;UBERON:0002384!6.99e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.46e-12,203;UBERON:0002390,2.13e-09,98;UBERON:0003061,2.13e-09,98;UBERON:0002405,2.96e-09,93;UBERON:0002193,3.72e-09,108;UBERON:0000926,3.02e-08,315;UBERON:0004120,3.02e-08,315;UBERON:0006603,3.02e-08,315;UBERON:0002371,3.48e-08,76;UBERON:0001474,4.05e-08,82;UBERON:0002384,1.02e-07,371 | |||
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| ||
|short_description=p1@PLEKHG2 | |short_description=p1@PLEKHG2 | ||
}} | }} |
Latest revision as of 23:28, 17 September 2015
Short description: | p1@PLEKHG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLEKHG2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 65bp_to_ENST00000409794_5end |
EntrezGene: | PLEKHG2 |
HGNC: | 29515 |
UniProt: | Q9H7P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.72e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.72e-17 | 42 |
leukocyte | 9.63e-14 | 136 |
nongranular leukocyte | 2.55e-13 | 115 |
defensive cell | 2.30e-12 | 48 |
phagocyte | 2.30e-12 | 48 |
hematopoietic lineage restricted progenitor cell | 1.88e-10 | 120 |
macrophage dendritic cell progenitor | 4.49e-10 | 61 |
monopoietic cell | 1.42e-09 | 59 |
monocyte | 1.42e-09 | 59 |
monoblast | 1.42e-09 | 59 |
promonocyte | 1.42e-09 | 59 |
hematopoietic cell | 2.95e-09 | 177 |
granulocyte monocyte progenitor cell | 9.80e-09 | 67 |
hematopoietic stem cell | 3.16e-07 | 168 |
stem cell | 3.16e-07 | 441 |
multi fate stem cell | 3.22e-07 | 427 |
myeloid leukocyte | 4.13e-07 | 72 |
somatic stem cell | 4.50e-07 | 433 |
myeloid lineage restricted progenitor cell | 7.97e-07 | 66 |
connective tissue cell | 8.56e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.46e-12 | 203 |
hematopoietic system | 2.13e-09 | 98 |
blood island | 2.13e-09 | 98 |
immune system | 2.96e-09 | 93 |
hemolymphoid system | 3.72e-09 | 108 |
mesoderm | 3.02e-08 | 315 |
mesoderm-derived structure | 3.02e-08 | 315 |
presumptive mesoderm | 3.02e-08 | 315 |
bone marrow | 3.48e-08 | 76 |
bone element | 4.05e-08 | 82 |
connective tissue | 1.02e-07 | 371 |