FFCP PHASE1:Hg19::chr12:26274917..26274929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8082 | |EntrezGene=8082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11322 | |HGNC=11322 | ||
|TSSclassifier=strong | |||
|UniProt=F5H381 | |UniProt=F5H381 | ||
|association_with_transcript=0bp_to_ENST00000538142_5end | |association_with_transcript=0bp_to_ENST00000538142_5end | ||
|cluster_id=chr12:26274917..26274929,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_5_at_SSPN_5end | |description=CAGE_peak_5_at_SSPN_5end | ||
|id=chr12:26274917..26274929,+ | |id=chr12:26274917..26274929,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.98e-14!14;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24 | |ontology_enrichment_celltype=CL:0000236!5.98e-14!14;CL:0000945!3.06e-09!24;CL:0000826!3.06e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.86e-54;13!CL:0000945;9.36e-34;24!CL:0000542;3.20e-12;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.77e-50,14;CL:0000945,8.72e-34,24;CL:0000826,8.72e-34,24;CL:0000542,1.88e-16,53;CL:0000051,1.88e-16,53;CL:0000838,2.76e-14,52;CL:0000738,1.11e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;3.20e-12;53!UBERON:0001045;3.39e-07;1!UBERON:0006298;8.67e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;4.70e-07;1!DOID:0070004;4.70e-07;1!DOID:12603;4.70e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.57e-07,1;DOID:0070004,4.57e-07,1;DOID:12603,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-30!115;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0000178!3.01e-07!15;UBERON:0000179!3.01e-07!15;UBERON:0000463!3.01e-07!15;UBERON:0002616!3.87e-07!59;UBERON:0000955!8.50e-07!69;UBERON:0006238!8.50e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!1.49e-30!115;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0000178!3.01e-07!15;UBERON:0000179!3.01e-07!15;UBERON:0000463!3.01e-07!15;UBERON:0002616!3.87e-07!59;UBERON:0000955!8.50e-07!69;UBERON:0006238!8.50e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.07e-13;15!UBERON:0000179;8.07e-13;15!UBERON:0000463;8.07e-13;15!UBERON:0002390;4.93e-09;32!UBERON:0002193;3.60e-08;42!UBERON:0002372;2.92e-07;1!UBERON:0001961;2.92e-07;1!UBERON:0001744;2.92e-07;1!UBERON:0001042;2.92e-07;1!UBERON:0001735;2.92e-07;1!UBERON:0001154;3.39e-07;1!UBERON:0001153;3.39e-07;1!UBERON:0009854;3.39e-07;1!UBERON:0000029;4.70e-07;1!UBERON:0001736;8.67e-07;1!UBERON:0002171;8.67e-07;1!UBERON:0006518;8.67e-07;1!UBERON:0008949;8.67e-07;1!UBERON:0000101;8.67e-07;1!UBERON:0002167;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.80e-13,15;UBERON:0000179,8.80e-13,15;UBERON:0000463,8.80e-13,15;UBERON:0007023,5.04e-08,114;UBERON:0002372,3.01e-07,1;UBERON:0001961,3.01e-07,1;UBERON:0001744,3.01e-07,1;UBERON:0001735,3.01e-07,1;UBERON:0001154,3.40e-07,1;UBERON:0001153,3.40e-07,1;UBERON:0001045,3.40e-07,1;UBERON:0000029,3.82e-07,1;UBERON:0001736,8.67e-07,1;UBERON:0006298,8.67e-07,1;UBERON:0002171,9.18e-07,1;UBERON:0006518,9.18e-07,1;UBERON:0008949,9.18e-07,1;UBERON:0000101,9.18e-07,1;UBERON:0002167,9.18e-07,1 | |||
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| ||
|short_description=p5@SSPN | |short_description=p5@SSPN | ||
}} | }} |
Latest revision as of 23:17, 17 September 2015
Short description: | p5@SSPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SSPN_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000538142_5end |
EntrezGene: | SSPN |
HGNC: | 11322 |
UniProt: | F5H381 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.77e-50 | 14 |
lymphocyte of B lineage | 8.72e-34 | 24 |
pro-B cell | 8.72e-34 | 24 |
lymphocyte | 1.88e-16 | 53 |
common lymphoid progenitor | 1.88e-16 | 53 |
lymphoid lineage restricted progenitor cell | 2.76e-14 | 52 |
leukocyte | 1.11e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 8.80e-13 | 15 |
haemolymphatic fluid | 8.80e-13 | 15 |
organism substance | 8.80e-13 | 15 |
adult organism | 5.04e-08 | 114 |
tonsil | 3.01e-07 | 1 |
mucosa-associated lymphoid tissue | 3.01e-07 | 1 |
lymphoid tissue | 3.01e-07 | 1 |
tonsillar ring | 3.01e-07 | 1 |
vermiform appendix | 3.40e-07 | 1 |
caecum | 3.40e-07 | 1 |
midgut | 3.40e-07 | 1 |
lymph node | 3.82e-07 | 1 |
submandibular gland | 8.67e-07 | 1 |
submandibular gland primordium | 8.67e-07 | 1 |
lower lobe of right lung | 9.18e-07 | 1 |
right lung lobe | 9.18e-07 | 1 |
lower lobe of lung | 9.18e-07 | 1 |
lobe of lung | 9.18e-07 | 1 |
right lung | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.57e-07 | 1 |
myeloma | 4.57e-07 | 1 |
acute leukemia | 4.85e-07 | 1 |