FFCP PHASE1:Hg19::chr2:165698322..165698340,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:165698322..165698340,-
|short_description=p1@COBLL1
|description=CAGE_peak_1_at_COBLL1_5end
|association_with_transcript=0bp_to_ENST00000434366,ENST0000044...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22837 | |EntrezGene=22837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23571 | |HGNC=23571 | ||
|TSSclassifier=strong | |||
|UniProt=C9JK90 | |UniProt=C9JK90 | ||
|association_with_transcript=0bp_to_ENST00000434366,ENST00000444537,ENST00000456171_5end | |||
|cluster_id=chr2:165698322..165698340,- | |||
|coexpression_cluster_id=C4139 | |||
|description=CAGE_peak_1_at_COBLL1_5end | |||
|id=chr2:165698322..165698340,- | |||
|ontology_enrichment_celltype=CL:0000066!4.77e-08!254;CL:0000223!5.76e-08!59;CL:0002076!2.61e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.63e-08,58;CL:0002076,1.49e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-19!115;UBERON:0004111!1.09e-09!241;UBERON:0000062!1.62e-08!511;UBERON:0009569!7.03e-08!113;UBERON:0000466!8.29e-08!126;UBERON:0000064!1.13e-07!219;UBERON:0000468!1.33e-07!659;UBERON:0004119!2.36e-07!169;UBERON:0000925!2.36e-07!169;UBERON:0006595!2.36e-07!169;UBERON:0000475!3.91e-07!365;UBERON:0000025!7.98e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.31e-19,114;UBERON:0009569,1.19e-08,112;UBERON:0004111,4.22e-08,240;UBERON:0004119,5.85e-08,160;UBERON:0000925,5.85e-08,160;UBERON:0006595,5.85e-08,160;UBERON:0004921,1.71e-07,118;UBERON:0011216,8.07e-07,223;UBERON:0001007,8.08e-07,145;UBERON:0001555,8.08e-07,145;UBERON:0007026,8.08e-07,145 | |||
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| ||
|short_description=p1@COBLL1 | |||
}} | }} |
Latest revision as of 23:16, 17 September 2015
Short description: | p1@COBLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COBLL1_5end |
Coexpression cluster: | C4139_placenta_chorionic_mature_amniotic_Mast_Hepatocyte_mesenchymal |
Association with transcript: | 0bp_to_ENST00000434366, ENST00000444537, ENST00000456171_5end |
EntrezGene: | COBLL1 |
HGNC: | 23571 |
UniProt: | C9JK90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.63e-08 | 58 |
endo-epithelial cell | 1.49e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.31e-19 | 114 |
subdivision of trunk | 1.19e-08 | 112 |
anatomical conduit | 4.22e-08 | 240 |
endoderm-derived structure | 5.85e-08 | 160 |
endoderm | 5.85e-08 | 160 |
presumptive endoderm | 5.85e-08 | 160 |
subdivision of digestive tract | 1.71e-07 | 118 |
organ system subdivision | 8.07e-07 | 223 |
digestive system | 8.08e-07 | 145 |
digestive tract | 8.08e-07 | 145 |
primitive gut | 8.08e-07 | 145 |