FFCP PHASE1:Hg19::chr4:48833070..48833118,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54940 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16074 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NX40,D6RDI5,D6RBC5,D6RIT9,D6RF01,D6RG39 | |||
|association_with_transcript=0bp_to_ENST00000264312,ENST00000381473,ENST00000396448,ENST00000507210,ENST00000508996,ENST00000509164,ENST00000511102,ENST00000511662,ENST00000512236,ENST00000512981_5end | |||
|cluster_id=chr4:48833070..48833118,+ | |||
|description=CAGE_peak_1_at_OCIAD1_5end | |||
|id=chr4:48833070..48833118,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.44e-16!86;UBERON:0000073!2.08e-15!94;UBERON:0001016!2.08e-15!94;UBERON:0001017!8.22e-15!82;UBERON:0001049!8.16e-14!57;UBERON:0005068!8.16e-14!57;UBERON:0006241!8.16e-14!57;UBERON:0007135!8.16e-14!57;UBERON:0002616!2.41e-13!59;UBERON:0000033!2.91e-13!123;UBERON:0002780!4.03e-13!41;UBERON:0001890!4.03e-13!41;UBERON:0006240!4.03e-13!41;UBERON:0002020!6.67e-13!34;UBERON:0003528!6.67e-13!34;UBERON:0001869!9.92e-13!32;UBERON:0000153!1.05e-12!129;UBERON:0007811!1.05e-12!129;UBERON:0003056!1.94e-12!61;UBERON:0003080!2.95e-12!42;UBERON:0001893!4.53e-12!34;UBERON:0000955!5.38e-12!69;UBERON:0006238!5.38e-12!69;UBERON:0002619!1.30e-11!22;UBERON:0002791!1.59e-11!33;UBERON:0003075!2.52e-11!86;UBERON:0007284!2.52e-11!86;UBERON:0004121!4.89e-11!169;UBERON:0002346!8.85e-11!90;UBERON:0001950!8.89e-11!20;UBERON:0000924!9.51e-11!173;UBERON:0006601!9.51e-11!173;UBERON:0000956!2.93e-10!25;UBERON:0000203!2.93e-10!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.28e-11;22!UBERON:0001869;1.33e-11;32!UBERON:0003528;1.85e-11;34!UBERON:0002020;1.85e-11;34!UBERON:0002791;4.88e-11;32!UBERON:0001950;8.86e-11;20!UBERON:0001893;9.54e-11;34!UBERON:0000956;2.80e-10;25!UBERON:0000203;2.80e-10;25!UBERON:0002780;1.50e-09;41!UBERON:0001890;1.50e-09;41!UBERON:0000073;2.55e-08;53!UBERON:0002616;2.55e-08;53!UBERON:0001017;3.03e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-15,81;UBERON:0001016,4.99e-15,89;UBERON:0001049,1.37e-14,56;UBERON:0005068,1.37e-14,56;UBERON:0006241,1.37e-14,56;UBERON:0007135,1.37e-14,56;UBERON:0000073,3.07e-14,53;UBERON:0002616,3.07e-14,53;UBERON:0003056,2.59e-13,61;UBERON:0002780,4.03e-13,41;UBERON:0001890,4.03e-13,41;UBERON:0003080,4.03e-13,41;UBERON:0006240,4.03e-13,41;UBERON:0003528,6.67e-13,34;UBERON:0002020,6.67e-13,34;UBERON:0001869,9.92e-13,32;UBERON:0000955,1.30e-12,68;UBERON:0006238,1.30e-12,68;UBERON:0003075,1.30e-12,82;UBERON:0007284,1.30e-12,82;UBERON:0001893,4.53e-12,34;UBERON:0002791,5.08e-12,32;UBERON:0002346,5.57e-12,86;UBERON:0002619,1.30e-11,22;UBERON:0004121,1.43e-11,171;UBERON:0000924,1.43e-11,171;UBERON:0006601,1.43e-11,171;UBERON:0001950,8.89e-11,20;UBERON:0000956,2.93e-10,25;UBERON:0000203,2.93e-10,25;UBERON:0010371,3.34e-10,104;UBERON:0010314,1.09e-08,132 | |||
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| |||
|short_description=p1@OCIAD1 | |||
}} |
Latest revision as of 23:07, 17 September 2015
Short description: | p1@OCIAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OCIAD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264312, ENST00000381473, ENST00000396448, ENST00000507210, ENST00000508996, ENST00000509164, ENST00000511102, ENST00000511662, ENST00000512236, ENST00000512981_5end |
EntrezGene: | OCIAD1 |
HGNC: | 16074 |
UniProt: | Q9NX40D6RDI5D6RBC5D6RIT9D6RF01D6RG39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.87e-15 | 81 |
nervous system | 4.99e-15 | 89 |
neural tube | 1.37e-14 | 56 |
neural rod | 1.37e-14 | 56 |
future spinal cord | 1.37e-14 | 56 |
neural keel | 1.37e-14 | 56 |
regional part of nervous system | 3.07e-14 | 53 |
regional part of brain | 3.07e-14 | 53 |
pre-chordal neural plate | 2.59e-13 | 61 |
regional part of forebrain | 4.03e-13 | 41 |
forebrain | 4.03e-13 | 41 |
anterior neural tube | 4.03e-13 | 41 |
future forebrain | 4.03e-13 | 41 |
brain grey matter | 6.67e-13 | 34 |
gray matter | 6.67e-13 | 34 |
cerebral hemisphere | 9.92e-13 | 32 |
brain | 1.30e-12 | 68 |
future brain | 1.30e-12 | 68 |
neural plate | 1.30e-12 | 82 |
presumptive neural plate | 1.30e-12 | 82 |
telencephalon | 4.53e-12 | 34 |
regional part of telencephalon | 5.08e-12 | 32 |
neurectoderm | 5.57e-12 | 86 |
regional part of cerebral cortex | 1.30e-11 | 22 |
ectoderm-derived structure | 1.43e-11 | 171 |
ectoderm | 1.43e-11 | 171 |
presumptive ectoderm | 1.43e-11 | 171 |
neocortex | 8.89e-11 | 20 |
cerebral cortex | 2.93e-10 | 25 |
pallium | 2.93e-10 | 25 |
ecto-epithelium | 3.34e-10 | 104 |
structure with developmental contribution from neural crest | 1.09e-08 | 132 |