FFCP PHASE1:Hg19::chr11:414950..415017,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30575 | |||
|TSSclassifier=strong | |||
|UniProt=Q6IA17,E9PK23,E9PLG6,E9PLI8 | |||
|association_with_transcript=0bp_to_ENST00000431843,ENST00000525070,ENST00000527136,ENST00000528058,ENST00000528116,ENST00000528209,ENST00000529486,ENST00000532587,ENST00000534217,NM_001135054,uc001lpd.2_5end | |||
|cluster_id=chr11:414950..415017,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_SIGIRR_5end | |||
|id=chr11:414950..415017,- | |||
|ontology_enrichment_celltype=CL:0000037!9.31e-47!172;CL:0000566!9.31e-47!172;CL:0000988!1.67e-43!182;CL:0002032!5.30e-43!165;CL:0000837!5.30e-43!165;CL:0000738!1.62e-39!140;CL:0002031!8.35e-35!124;CL:0002087!1.74e-34!119;CL:0000763!5.10e-27!112;CL:0000049!5.10e-27!112;CL:0000766!1.73e-23!76;CL:0000839!2.66e-20!70;CL:0000557!3.39e-20!71;CL:0002057!3.65e-19!42;CL:0002194!4.39e-18!63;CL:0000576!4.39e-18!63;CL:0000040!4.39e-18!63;CL:0000559!4.39e-18!63;CL:0002009!3.36e-17!65;CL:0000860!2.12e-16!45;CL:0000084!9.01e-16!25;CL:0000827!9.01e-16!25;CL:0000838!6.91e-15!52;CL:0000542!3.45e-14!53;CL:0000051!3.45e-14!53;CL:0000791!4.08e-14!18;CL:0000789!4.08e-14!18;CL:0002420!4.08e-14!18;CL:0002419!4.08e-14!18;CL:0000790!4.08e-14!18;CL:0000625!3.22e-09!11;CL:0000115!2.59e-07!35;CL:0002139!4.66e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.61e-19;25!CL:0000791;4.01e-17;18!CL:0000789;4.01e-17;18!CL:0002419;4.01e-17;18!CL:0000576;2.32e-16;48!CL:0000860;1.42e-15;33!CL:0002057;1.42e-15;33!CL:0000766;9.27e-14;69!CL:0000473;1.62e-13;39!CL:0000234;1.62e-13;39!CL:0002087;3.64e-13;104!CL:0000763;8.63e-13;100!CL:0000625;4.67e-11;11!CL:0000738;3.44e-10;136!CL:0000542;4.89e-10;53!CL:0000988;2.46e-09;177!CL:0000115;3.67e-08;36!CL:0002139;1.28e-07;24!CL:0000624;5.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.99e-55,168;CL:0002032,1.76e-51,161;CL:0000837,1.76e-51,161;CL:0000988,7.71e-50,177;CL:0000738,2.92e-46,136;CL:0002087,1.57e-42,115;CL:0002031,2.26e-41,120;CL:0000763,1.41e-33,108;CL:0000049,1.41e-33,108;CL:0000766,2.66e-30,72;CL:0000557,1.54e-26,67;CL:0000839,7.20e-26,66;CL:0002194,3.52e-24,59;CL:0000576,3.52e-24,59;CL:0000040,3.52e-24,59;CL:0000559,3.52e-24,59;CL:0000473,1.39e-23,48;CL:0000234,1.39e-23,48;CL:0000860,2.20e-23,42;CL:0002057,2.20e-23,42;CL:0002009,1.05e-22,61;CL:0000084,3.57e-19,25;CL:0000827,3.57e-19,25;CL:0000791,4.05e-17,18;CL:0000789,4.05e-17,18;CL:0002420,4.05e-17,18;CL:0002419,4.05e-17,18;CL:0000790,4.05e-17,18;CL:0000838,3.88e-16,52;CL:0000542,1.57e-15,53;CL:0000051,1.57e-15,53;CL:0000625,4.73e-11,11;CL:0000115,5.59e-09,36;CL:0002139,8.53e-08,24;CL:0002393,9.46e-08,9;CL:0002397,9.46e-08,9;CL:0000624,5.89e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.01e-17;18!CL:0002057;9.87e-17;42!CL:0000049;3.03e-10;108!CL:0000051;4.89e-10;53 | |||
|ontology_enrichment_disease=DOID:1240!2.19e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.67e-08;31!DOID:1240;4.33e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.08e-10,39;DOID:8692,5.72e-09,31;DOID:2531,3.88e-08,51;DOID:0060083,3.88e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.62e-27!112;UBERON:0002390!1.76e-24!102;UBERON:0003061!1.76e-24!102;UBERON:0002405!5.15e-17!115;UBERON:0002371!2.97e-16!80;UBERON:0007023!1.34e-14!115;UBERON:0001474!1.23e-13!86;UBERON:0003081!1.04e-12!216;UBERON:0004765!1.21e-08!101;UBERON:0001434!1.21e-08!101;UBERON:0000178!3.02e-07!15;UBERON:0000179!3.02e-07!15;UBERON:0000463!3.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-07;15!UBERON:0000179;1.31e-07;15!UBERON:0000463;1.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.27e-33,108;UBERON:0002390,9.80e-32,98;UBERON:0003061,9.80e-32,98;UBERON:0002405,6.76e-27,93;UBERON:0002371,6.59e-22,76;UBERON:0001474,1.19e-18,82;UBERON:0003081,1.27e-16,203;UBERON:0004765,4.39e-15,90;UBERON:0001434,4.65e-12,100;UBERON:0007023,1.58e-08,114;UBERON:0000178,1.33e-07,15;UBERON:0000179,1.33e-07,15;UBERON:0000463,1.33e-07,15 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,17.3080281813518,34.5446458287491,16.5653251948201,0,0,0,0.0774672005803016,0.142169232487422,23.4880351467878,26.0377842009982,33.6914671749838,35.3727719266838,4.70222495903841,6.15397965436061,5.40908692031792,6.68831898385998,5.29026321164333,4.85168122375632,4.88100977501938,2.87817521615278,4.95530193432166,11.2200033005639,8.70946402198942,6.85798466676897,9.3081333798887,9.68227025375739,2.70852973188684,4.70605848856512,4.09359225086769,3.82029923556644,9.48860066349798,6.09765151444578,8.31138263538754,4.28806690242731,4.78712778291916,8.09827026012119,9.86711411337186,6.24123747160254,3.73693349397345,6.02996796616184,7.82224377630302,5.64690996233303,7.87019353423379,7.36555271975129,6.0127853613768,17.1116781912673,10.6302149982522,9.01532175686016,15.5013510982163,8.40990599912435,5.78612112109488,20.8059302931111,10.94041724595,11.1425133796427,8.79981222306614,4.36910889009705,5.33705552318133,7.68114400619713,6.00593980554019,1.14950487990897,1.32208974556972,4.77026877267682,6.83055562931338,7.04684627245127,5.73409842187843,14.5388461436928,10.6496626966492,5.53106578027662,50.5544109192551,61.3096789888697,64.5588706858459,37.9513344536839,73.0065877259242,60.6013191340459,52.6032166701361,33.3117266086669,65.4025114594139,48.515922913813,46.0366568400527,30.2295514552593,29.3934125485325,47.5225544304624,39.2417025255905,41.7316443458476,69.2498249966822,39.5960425572775,55.4038276166377,32.9730187249918,71.2790118099574,61.1656852959081,60.4717063926612,64.6687791077916,55.3420935777956,48.4730542668671,24.9954697669103,24.7014159528027,64.9639778072198,67.7182940845888,62.4057277659995,63.9093376022402,81.8366999097532,63.8675621123144,0,0.670700859703636,0,0,0,0,0,0,0,0,0.87834785693126,4.32230949142452,0,0,1.29818957461873,0.696518949197069,2.26028532882071,3.81584998888547,4.0039643754609,0.74291500265913,1.78886166630035,3.4409383804245,2.08284300964557,3.95715559346807,5.87299210693868,4.95212475492121,1.8809546988313,2.58416759169329,4.26919515224052,1.00416183829401,4.83395180530976,0.760272105718513,6.10155143870424,2.57364156242108,5.67099363517232,1.7859945656816,2.46982309888787,1.35133776579987,9.19899824795299,3.79706263827252,6.04565754970344,6.58902087180316,7.75560528296651,0,0,0,0,0,2.12801029319014,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0,0.576175924479999,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0.567160915800105,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,4.20725321410337,0,0,0,0.982827216677626,2.95394953340702,14.1268191812688,0,0,0,0,0,0,0,0,0,0,0,3.89789408954899,3.70388410061289,2.66355813128438,0,0,4.43190610957315,0.702012795417713,2.37809859661965,0,0,0,0,0,0.383382679165211,8.37527504423104,13.2072651019839,13.683655625691,13.8355155280283,13.5079403766227,0.380987365753014,0.763976851116555,0,0,1.7480673759565,2.10240140490742,0.857479297891735,0.224262168690721,0,0.66004457238855,0.258543431515556,0,1.690605505112,0,0,0,0,0.799266537048298,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,4.86495122564762,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,16.9248567430226,76.8419964787516,79.7822026980214,72.8988446068971,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.783204629850962,0.343143423810856,37.8385487804884,43.7899827661792,63.3961693352459,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,1.13733384070897,3.40187410553031,1.29549549661284,12.3381802152231,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,3.81251743096572,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.511359764496605,0,0,0,0.127612712494584,0,0,0,0.6970372701606,1.23213432070436,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0,0,0.235624804691373,0.202182481573316,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0.66343897524122,0,0,1.31178950409327,0,2.16876448669825,0.281695602532241,0.430234056612155,0.196498082026242,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,4.42475863650862,0,0,0.886860307073351,0.229723400206959,12.6861902308042,16.8220185571323,48.989658096978,36.9259251959573,25.504460931344,10.3755729790835,16.7409745543816,58.691263045776,0,0,0,0,0.865615277858669,3.69937585411753,9.72500263645816,19.9579371432817,31.7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| |||
|short_description=p2@SIGIRR | |||
}} |
Latest revision as of 23:07, 17 September 2015
Short description: | p2@SIGIRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIGIRR_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000431843, ENST00000525070, ENST00000527136, ENST00000528058, ENST00000528116, ENST00000528209, ENST00000529486, ENST00000532587, ENST00000534217, NM_001135054, uc001lpd.2_5end |
EntrezGene: | SIGIRR |
HGNC: | 30575 |
UniProt: | Q6IA17E9PK23E9PLG6E9PLI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.27e-33 | 108 |
hematopoietic system | 9.80e-32 | 98 |
blood island | 9.80e-32 | 98 |
immune system | 6.76e-27 | 93 |
bone marrow | 6.59e-22 | 76 |
bone element | 1.19e-18 | 82 |
lateral plate mesoderm | 1.27e-16 | 203 |
skeletal element | 4.39e-15 | 90 |
skeletal system | 4.65e-12 | 100 |
adult organism | 1.58e-08 | 114 |
blood | 1.33e-07 | 15 |
haemolymphatic fluid | 1.33e-07 | 15 |
organism substance | 1.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.08e-10 | 39 |
myeloid leukemia | 5.72e-09 | 31 |
hematologic cancer | 3.88e-08 | 51 |
immune system cancer | 3.88e-08 | 51 |