FFCP PHASE1:Hg19::chr4:48782239..48782250,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:48782239..48782250,- to FFCP PHASE1:Hg19::chr4:48782239..48782250,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285527 | |EntrezGene=285527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29127 | |HGNC=29127 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2S2 | |UniProt=F2Z2S2 | ||
|association_with_transcript=14bp_to_ENST00000507711_5end | |||
|cluster_id=chr4:48782239..48782250,- | |||
|description=CAGE_peak_5_at_FRYL_5end | |||
|id=chr4:48782239..48782250,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.20e-13!82;UBERON:0000073!6.29e-13!94;UBERON:0001016!6.29e-13!94;UBERON:0000955!7.90e-13!69;UBERON:0006238!7.90e-13!69;UBERON:0005743!1.38e-12!86;UBERON:0001049!3.78e-12!57;UBERON:0005068!3.78e-12!57;UBERON:0006241!3.78e-12!57;UBERON:0007135!3.78e-12!57;UBERON:0002616!3.21e-11!59;UBERON:0002780!5.39e-11!41;UBERON:0001890!5.39e-11!41;UBERON:0006240!5.39e-11!41;UBERON:0000153!1.12e-10!129;UBERON:0007811!1.12e-10!129;UBERON:0003080!2.47e-10!42;UBERON:0001893!6.70e-10!34;UBERON:0002020!7.21e-10!34;UBERON:0003528!7.21e-10!34;UBERON:0002791!1.06e-09!33;UBERON:0000033!1.60e-09!123;UBERON:0003075!1.66e-09!86;UBERON:0007284!1.66e-09!86;UBERON:0002346!1.82e-09!90;UBERON:0000924!1.96e-09!173;UBERON:0006601!1.96e-09!173;UBERON:0004121!2.30e-09!169;UBERON:0001869!9.91e-09!32;UBERON:0003056!3.06e-08!61;UBERON:0000956!3.40e-08!25;UBERON:0000203!3.40e-08!25;UBERON:0001950!8.14e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.32e-10;41!UBERON:0001890;3.32e-10;41!UBERON:0000073;5.07e-09;53!UBERON:0002616;5.07e-09;53!UBERON:0001893;1.56e-08;34!UBERON:0002791;4.11e-08;32!UBERON:0000956;6.62e-08;25!UBERON:0000203;6.62e-08;25!UBERON:0005162;5.17e-07;2!UBERON:0000122;5.17e-07;2!UBERON:0003528;7.38e-07;34!UBERON:0002020;7.38e-07;34!UBERON:0001869;9.30e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,5.33e-16,104;UBERON:0002346,6.27e-16,86;UBERON:0003075,1.81e-15,82;UBERON:0007284,1.81e-15,82;UBERON:0001049,2.26e-15,56;UBERON:0005068,2.26e-15,56;UBERON:0006241,2.26e-15,56;UBERON:0007135,2.26e-15,56;UBERON:0002780,1.90e-13,41;UBERON:0001890,1.90e-13,41;UBERON:0003080,1.90e-13,41;UBERON:0006240,1.90e-13,41;UBERON:0000073,7.92e-13,53;UBERON:0002616,7.92e-13,53;UBERON:0010314,2.94e-12,132;UBERON:0001016,3.75e-12,89;UBERON:0003056,8.06e-12,61;UBERON:0001017,1.93e-11,81;UBERON:0004121,6.58e-11,171;UBERON:0000924,6.58e-11,171;UBERON:0006601,6.58e-11,171;UBERON:0001893,1.84e-10,34;UBERON:0000955,2.94e-10,68;UBERON:0006238,2.94e-10,68;UBERON:0002791,2.48e-09,32;UBERON:0003528,1.15e-08,34;UBERON:0002020,1.15e-08,34;UBERON:0000956,4.15e-08,25;UBERON:0000203,4.15e-08,25;UBERON:0001869,1.39e-07,32;UBERON:0005162,1.76e-07,2;UBERON:0000122,1.76e-07,2;UBERON:0004111,4.82e-07,240 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,1.43117993565528,1.23186982565596,0.87879847716362,0.0764134057479513,0.0821005894499457,0,0,0,0.464448369948228,0,0,0,0.387336002901508,0.142169232487422,0,0,0.601633342410425,0.651032612147555,0.447830948479849,0.647787332037959,0.515151135268373,0.290796477559129,0.377875943688809,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0.47296445977717,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0.628975936525128,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0,2.86216126360609,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0.334372990781356,0,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0.289803085735052,0.14828656316206,1.07016331235885,0,0,0.766440987203842,0.68725489096526,0.759059076058509,0,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0.821127996921047,0.80642697289893,0.534880391567015,0.289648807765598,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.472674085820339,0.443458794925128,0.43917392846563,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0.715471872916026,0,1.48583000531826,0.198762407366705,0,0.347140501607594,0,0,0,0.417989933073621,1.03366703667732,1.06729878806013,2.00832367658802,1.20848795132744,1.52054421143703,0,0,0,0.892997282840798,0.22452937262617,0.900891843866578,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.506522046658319,1.19168262731897,0.286836620748814,0,0,1.06748995729705,0,0,0.67355336034844,1.30769522490767,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.149448680551801,0.587172493218824,0.647491777472526,0.280901613404497,0,0.491337269247072,0.309977343527296,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.453728732640084,0.717558542755448,0,0,0.600182192168805,0.206105058476878,0.515281080091258,0.18611685633159,1.18143432568886,0.292311015483596,0.757301322732344,0,0,1.42003837006646,0.201504196455281,0.169560592310488,0.773043412653187,1.36373060295417,1.14721838155602,0.121973706129595,0.265059536642971,0.464775771478074,0.310983165046111,0,1.45990943630332,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,1.02940686179115,0.109750285408626,0,0.402115889646523,0.277765335475589,0,1.03993478527958,0,0.579652024875384,0.469634776943287,0.721832238805369,0.925971025153221,0.761016608938393,0,0,0,0,0.148631162288728,0,0.671928512795438,0.425325291727159,0.806026704325635,1.45316969256981,0.383382679165211,1.47798971368783,0,0.621984346622316,0.144119953416961,0.6312121671319,0.444485260045183,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0.336393253036082,0,0.1466765716419,0.258543431515556,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.716243852959582,0.336255431980582,0.197030760201927,0.431255149719035,0.128343036279748,1.01637849688985,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.459257792658427,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0.366277859273374,0.495056999523528,0.574265537996172,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.689182862422653,0.322260734604821,0.435050081742686,0.0852266274161009,0.178064071293475,0.495854746082934,0.384380134730212,2.80747967488085,0.30347334256665,0,1.5740617341532,0,0,0,0.869932992075073,0,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,1.58510321173008,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0.709522128141196,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.557409525377156,0.865615277858669,0.284567373393656,0.956557636372934,0,0.191505370132367,0,0.324621940274555,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,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| ||
|short_description=p5@FRYL | |||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p5@FRYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FRYL_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000507711_5end |
EntrezGene: | FRYL |
HGNC: | 29127 |
UniProt: | F2Z2S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 5.33e-16 | 104 |
neurectoderm | 6.27e-16 | 86 |
neural plate | 1.81e-15 | 82 |
presumptive neural plate | 1.81e-15 | 82 |
neural tube | 2.26e-15 | 56 |
neural rod | 2.26e-15 | 56 |
future spinal cord | 2.26e-15 | 56 |
neural keel | 2.26e-15 | 56 |
regional part of forebrain | 1.90e-13 | 41 |
forebrain | 1.90e-13 | 41 |
anterior neural tube | 1.90e-13 | 41 |
future forebrain | 1.90e-13 | 41 |
regional part of nervous system | 7.92e-13 | 53 |
regional part of brain | 7.92e-13 | 53 |
structure with developmental contribution from neural crest | 2.94e-12 | 132 |
nervous system | 3.75e-12 | 89 |
pre-chordal neural plate | 8.06e-12 | 61 |
central nervous system | 1.93e-11 | 81 |
ectoderm-derived structure | 6.58e-11 | 171 |
ectoderm | 6.58e-11 | 171 |
presumptive ectoderm | 6.58e-11 | 171 |
telencephalon | 1.84e-10 | 34 |
brain | 2.94e-10 | 68 |
future brain | 2.94e-10 | 68 |
regional part of telencephalon | 2.48e-09 | 32 |
brain grey matter | 1.15e-08 | 34 |
gray matter | 1.15e-08 | 34 |
cerebral cortex | 4.15e-08 | 25 |
pallium | 4.15e-08 | 25 |
cerebral hemisphere | 1.39e-07 | 32 |
multi cell component structure | 1.76e-07 | 2 |
neuron projection bundle | 1.76e-07 | 2 |
anatomical conduit | 4.82e-07 | 240 |