FFCP PHASE1:Hg19::chr17:76778339..76778413,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:76778339..76778413,-
|short_description=p1@CYTH1
|description=CAGE_peak_1_at_CYTH1_5end
|association_with_transcript=0bp_to_ENST00000262763,ENST0000036110...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9267 | |EntrezGene=9267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9501 | |HGNC=9501 | ||
|TSSclassifier=strong | |||
|UniProt=Q15438,A8MWB4,A8MYI0 | |UniProt=Q15438,A8MWB4,A8MYI0 | ||
|association_with_transcript=0bp_to_ENST00000262763,ENST00000361101,ENST00000392453,ENST00000392457,ENST00000446868,ENST00000472366,ENST00000473677,NM_004762,NM_017456,uc002jvw.2_5end | |||
|cluster_id=chr17:76778339..76778413,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_CYTH1_5end | |||
|id=chr17:76778339..76778413,- | |||
|ontology_enrichment_celltype=CL:0000738!2.40e-52!140;CL:0000037!6.31e-44!172;CL:0000566!6.31e-44!172;CL:0002031!4.65e-42!124;CL:0002087!1.50e-41!119;CL:0002032!8.52e-41!165;CL:0000837!8.52e-41!165;CL:0000988!5.97e-40!182;CL:0000766!3.89e-25!76;CL:0000557!8.24e-22!71;CL:0000839!9.51e-21!70;CL:0002057!2.08e-20!42;CL:0000763!2.12e-20!112;CL:0000049!2.12e-20!112;CL:0002009!4.32e-20!65;CL:0000542!1.03e-19!53;CL:0000051!1.03e-19!53;CL:0000838!1.24e-19!52;CL:0002194!2.57e-19!63;CL:0000576!2.57e-19!63;CL:0000040!2.57e-19!63;CL:0000559!2.57e-19!63;CL:0000860!7.70e-18!45;CL:0000791!2.14e-12!18;CL:0000789!2.14e-12!18;CL:0002420!2.14e-12!18;CL:0002419!2.14e-12!18;CL:0000790!2.14e-12!18;CL:0000084!2.41e-11!25;CL:0000827!2.41e-11!25;CL:0000625!2.00e-08!11;CL:0000945!7.06e-08!24;CL:0000826!7.06e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.03e-15;33!CL:0002057;7.03e-15;33!CL:0000473;2.70e-14;39!CL:0000234;2.70e-14;39!CL:0002087;6.72e-13;104!CL:0000576;9.19e-13;48!CL:0000791;1.90e-12;18!CL:0000789;1.90e-12;18!CL:0002419;1.90e-12;18!CL:0000766;5.88e-12;69!CL:0000738;1.67e-11;136!CL:0000084;1.98e-11;25!CL:0000542;3.77e-11;53!CL:0000625;1.84e-08;11!CL:0000945;6.60e-08;24!CL:0000988;2.71e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.58e-55,136;CL:0000037,6.91e-46,168;CL:0002031,1.58e-44,120;CL:0002087,4.44e-44,115;CL:0002032,1.02e-42,161;CL:0000837,1.02e-42,161;CL:0000988,1.63e-41,177;CL:0000766,1.33e-27,72;CL:0000557,3.83e-24,67;CL:0000839,5.12e-23,66;CL:0002009,1.94e-22,61;CL:0000473,2.13e-22,48;CL:0000234,2.13e-22,48;CL:0000763,5.90e-22,108;CL:0000049,5.90e-22,108;CL:0002194,1.19e-21,59;CL:0000576,1.19e-21,59;CL:0000040,1.19e-21,59;CL:0000559,1.19e-21,59;CL:0000860,2.08e-20,42;CL:0002057,2.08e-20,42;CL:0000542,1.03e-19,53;CL:0000051,1.03e-19,53;CL:0000838,1.24e-19,52;CL:0000791,2.14e-12,18;CL:0000789,2.14e-12,18;CL:0002420,2.14e-12,18;CL:0002419,2.14e-12,18;CL:0000790,2.14e-12,18;CL:0000084,2.41e-11,25;CL:0000827,2.41e-11,25;CL:0000625,2.00e-08,11;CL:0000945,7.06e-08,24;CL:0000826,7.06e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.30e-15;42!CL:0000790;1.90e-12;18!CL:0000051;3.77e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.09e-26!102;UBERON:0003061!6.09e-26!102;UBERON:0002193!3.88e-25!112;UBERON:0002405!5.78e-19!115;UBERON:0002371!8.46e-19!80;UBERON:0001474!2.18e-17!86;UBERON:0007023!5.59e-16!115;UBERON:0004765!4.85e-12!101;UBERON:0001434!4.85e-12!101;UBERON:0003081!8.46e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.13e-28,98;UBERON:0003061,6.13e-28,98;UBERON:0002193,6.02e-27,108;UBERON:0002405,1.62e-22,93;UBERON:0002371,1.10e-20,76;UBERON:0001474,4.53e-19,82;UBERON:0007023,8.14e-16,114;UBERON:0004765,1.34e-14,90;UBERON:0001434,1.35e-11,100;UBERON:0003081,4.57e-08,203 | |||
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225106 | ||
|short_description=p1@CYTH1 | |||
}} | }} |
Latest revision as of 22:51, 17 September 2015
Short description: | p1@CYTH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYTH1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000262763, ENST00000361101, ENST00000392453, ENST00000392457, ENST00000446868, ENST00000472366, ENST00000473677, NM_004762, NM_017456, uc002jvw.2_5end |
EntrezGene: | CYTH1 |
HGNC: | 9501 |
UniProt: | Q15438A8MWB4A8MYI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-28 | 98 |
blood island | 6.13e-28 | 98 |
hemolymphoid system | 6.02e-27 | 108 |
immune system | 1.62e-22 | 93 |
bone marrow | 1.10e-20 | 76 |
bone element | 4.53e-19 | 82 |
adult organism | 8.14e-16 | 114 |
skeletal element | 1.34e-14 | 90 |
skeletal system | 1.35e-11 | 100 |
lateral plate mesoderm | 4.57e-08 | 203 |