FFCP PHASE1:Hg19::chr4:48485436..48485441,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201780 | |EntrezGene=201780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22980 | |HGNC=22980 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EP9 | |UniProt=Q96EP9 | ||
|association_with_transcript=76bp_to_ENST00000273861,NM_152679,uc003gyc.2_5end | |association_with_transcript=76bp_to_ENST00000273861,NM_152679,uc003gyc.2_5end | ||
|cluster_id=chr4:48485436..48485441,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_12_at_SLC10A4_5end | |description=CAGE_peak_12_at_SLC10A4_5end | ||
|id=chr4:48485436..48485441,+ | |id=chr4:48485436..48485441,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.52e-50;2!CL:0000333;4.66e-21;5!CL:0002321;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.07e-13,8;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000133;7.94e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;8.34e-18;6!DOID:171;2.87e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-24!57;UBERON:0005068!1.35e-24!57;UBERON:0006241!1.35e-24!57;UBERON:0007135!1.35e-24!57;UBERON:0002020!4.41e-23!34;UBERON:0003528!4.41e-23!34;UBERON:0000073!1.79e-22!94;UBERON:0001016!1.79e-22!94;UBERON:0001017!6.49e-22!82;UBERON:0001869!5.38e-21!32;UBERON:0002616!6.40e-21!59;UBERON:0005743!1.10e-20!86;UBERON:0001893!1.23e-19!34;UBERON:0002780!1.02e-18!41;UBERON:0001890!1.02e-18!41;UBERON:0006240!1.02e-18!41;UBERON:0003080!3.28e-18!42;UBERON:0002791!2.72e-17!33;UBERON:0000955!4.82e-17!69;UBERON:0006238!4.82e-17!69;UBERON:0003075!7.38e-17!86;UBERON:0007284!7.38e-17!86;UBERON:0002346!6.46e-16!90;UBERON:0000988!1.95e-14!3;UBERON:0001950!3.40e-13!20;UBERON:0000956!4.08e-13!25;UBERON:0000203!4.08e-13!25;UBERON:0002308!9.94e-13!9;UBERON:0000125!9.94e-13!9;UBERON:0004121!1.22e-12!169;UBERON:0000924!3.21e-12!173;UBERON:0006601!3.21e-12!173;UBERON:0002619!6.15e-12!22;UBERON:0003056!1.05e-11!61;UBERON:0007023!1.54e-11!115;UBERON:0000369!6.34e-11!4;UBERON:0002435!6.34e-11!4;UBERON:0000204!6.34e-11!4;UBERON:0010082!6.34e-11!4;UBERON:0002148!1.98e-10!2;UBERON:0009662!1.98e-10!2;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0002298!2.29e-09!8;UBERON:0002021!2.97e-09!5;UBERON:0000033!3.97e-09!123;UBERON:0003076!1.41e-07!15;UBERON:0003057!1.41e-07!15;UBERON:0000200!1.53e-07!6;UBERON:0006331!3.18e-07!3;UBERON:0005383!3.18e-07!3;UBERON:0005382!3.18e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.35e-24!57;UBERON:0005068!1.35e-24!57;UBERON:0006241!1.35e-24!57;UBERON:0007135!1.35e-24!57;UBERON:0002020!4.41e-23!34;UBERON:0003528!4.41e-23!34;UBERON:0000073!1.79e-22!94;UBERON:0001016!1.79e-22!94;UBERON:0001017!6.49e-22!82;UBERON:0001869!5.38e-21!32;UBERON:0002616!6.40e-21!59;UBERON:0005743!1.10e-20!86;UBERON:0001893!1.23e-19!34;UBERON:0002780!1.02e-18!41;UBERON:0001890!1.02e-18!41;UBERON:0006240!1.02e-18!41;UBERON:0003080!3.28e-18!42;UBERON:0002791!2.72e-17!33;UBERON:0000955!4.82e-17!69;UBERON:0006238!4.82e-17!69;UBERON:0003075!7.38e-17!86;UBERON:0007284!7.38e-17!86;UBERON:0002346!6.46e-16!90;UBERON:0000988!1.95e-14!3;UBERON:0001950!3.40e-13!20;UBERON:0000956!4.08e-13!25;UBERON:0000203!4.08e-13!25;UBERON:0002308!9.94e-13!9;UBERON:0000125!9.94e-13!9;UBERON:0004121!1.22e-12!169;UBERON:0000924!3.21e-12!173;UBERON:0006601!3.21e-12!173;UBERON:0002619!6.15e-12!22;UBERON:0003056!1.05e-11!61;UBERON:0007023!1.54e-11!115;UBERON:0000369!6.34e-11!4;UBERON:0002435!6.34e-11!4;UBERON:0000204!6.34e-11!4;UBERON:0010082!6.34e-11!4;UBERON:0002148!1.98e-10!2;UBERON:0009662!1.98e-10!2;UBERON:0000153!1.15e-09!129;UBERON:0007811!1.15e-09!129;UBERON:0002298!2.29e-09!8;UBERON:0002021!2.97e-09!5;UBERON:0000033!3.97e-09!123;UBERON:0003076!1.41e-07!15;UBERON:0003057!1.41e-07!15;UBERON:0000200!1.53e-07!6;UBERON:0006331!3.18e-07!3;UBERON:0005383!3.18e-07!3;UBERON:0005382!3.18e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.66e-21;5!UBERON:0002410;4.66e-21;5!UBERON:0000010;2.31e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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|short_description=p12@SLC10A4 | |short_description=p12@SLC10A4 | ||
}} | }} |
Latest revision as of 22:47, 17 September 2015
Short description: | p12@SLC10A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC10A4_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 76bp_to_ENST00000273861, NM_152679, uc003gyc.2_5end |
EntrezGene: | SLC10A4 |
HGNC: | 22980 |
UniProt: | Q96EP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.07e-13 | 8 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |