FFCP PHASE1:Hg19::chr3:3152043..3152064,-: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3568 | |EntrezGene=3568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6017 | |HGNC=6017 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3K8,B4E2G0,Q01344,Q8NHV7 | |UniProt=C9J3K8,B4E2G0,Q01344,Q8NHV7 | ||
|association_with_transcript=0bp_to_ENST00000353055,ENST00000427088,ENST00000438560,ENST00000446632,ENST00000466722,NM_000564,NM_001243099,NM_175724,NM_175725,NM_175726,NM_175727,NM_175728,uc010hbs.2,uc010hbt.2,uc010hbu.2,uc011ask.1,uc011asl.1,uc011asm.1,uc011asn.1_5end | |||
|cluster_id=chr3:3152043..3152064,- | |||
|description=CAGE_peak_4_at_IL5RA_5end | |||
|id=chr3:3152043..3152064,- | |||
|ontology_enrichment_celltype=CL:0000542!1.89e-13!53;CL:0000051!1.89e-13!53;CL:0000838!2.23e-12!52;CL:0002274!8.24e-11!5;CL:0000457!8.24e-11!5;CL:0002191!8.24e-11!5;CL:0000097!8.24e-11!5;CL:0000831!8.24e-11!5;CL:0002028!8.24e-11!5;CL:0000625!2.31e-10!11;CL:0000236!6.84e-10!14;CL:0000791!7.09e-09!18;CL:0000789!7.09e-09!18;CL:0002420!7.09e-09!18;CL:0002419!7.09e-09!18;CL:0000790!7.09e-09!18;CL:0000738!7.41e-08!140;CL:0000623!3.82e-07!3;CL:0000825!3.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.18e-19;3!CL:0000097;1.87e-12;5!CL:0000625;3.43e-09;11!CL:0000163;4.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.14e-19,3;CL:0000825,5.14e-19,3;CL:0000097,1.74e-12,5;CL:0002028,1.74e-12,5;CL:0000542,8.93e-10,53;CL:0000051,8.93e-10,53;CL:0000625,4.97e-09,11;CL:0000838,4.55e-08,52;CL:0000163,3.93e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.15e-13;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-26!115;UBERON:0001049!2.49e-11!57;UBERON:0005068!2.49e-11!57;UBERON:0006241!2.49e-11!57;UBERON:0007135!2.49e-11!57;UBERON:0002616!1.47e-09!59;UBERON:0001894!2.64e-09!7;UBERON:0006222!2.64e-09!7;UBERON:0003296!5.09e-08!4;UBERON:0010133!5.09e-08!4;UBERON:0002780!2.00e-07!41;UBERON:0001890!2.00e-07!41;UBERON:0006240!2.00e-07!41;UBERON:0001896!2.08e-07!3;UBERON:0005290!2.08e-07!3;UBERON:0010096!2.08e-07!3;UBERON:0000955!3.22e-07!69;UBERON:0006238!3.22e-07!69;UBERON:0003080!3.65e-07!42;UBERON:0003075!6.12e-07!86;UBERON:0007284!6.12e-07!86;UBERON:0002298!9.50e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.02e-26;6!UBERON:0001896;5.25e-20;3!UBERON:0005290;5.25e-20;3!UBERON:0001873;1.15e-13;2!UBERON:0002148;1.63e-13;2!UBERON:0006331;1.63e-13;2!UBERON:0009662;1.63e-13;2!UBERON:0004733;3.92e-13;12!UBERON:0002028;3.92e-13;12!UBERON:0004732;4.16e-12;13!UBERON:0000125;2.13e-11;9!UBERON:0002308;2.13e-11;9!UBERON:0005383;2.09e-09;3!UBERON:0005382;2.09e-09;3!UBERON:0000988;2.64e-09;3!UBERON:0001301;4.88e-08;1!UBERON:0002171;9.43e-08;1!UBERON:0006518;9.43e-08;1!UBERON:0008949;9.43e-08;1!UBERON:0000101;9.43e-08;1!UBERON:0002167;9.43e-08;1!UBERON:0000369;2.94e-07;4!UBERON:0002435;2.94e-07;4!UBERON:0000204;2.94e-07;4!UBERON:0002420;6.91e-07;9!UBERON:0007245;6.91e-07;9!UBERON:0010009;6.91e-07;9!UBERON:0010011;6.91e-07;9!UBERON:0000454;6.91e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.13e-26,6;UBERON:0001896,7.74e-20,3;UBERON:0005290,7.74e-20,3;UBERON:0010096,7.74e-20,3;UBERON:0003076,1.05e-14,15;UBERON:0003057,1.05e-14,15;UBERON:0001873,8.65e-14,2;UBERON:0010122,8.65e-14,2;UBERON:0002148,1.19e-13,2;UBERON:0006331,1.19e-13,2;UBERON:0009662,1.19e-13,2;UBERON:0004733,4.02e-13,12;UBERON:0002028,4.02e-13,12;UBERON:0007277,4.02e-13,12;UBERON:0004732,4.26e-12,13;UBERON:0000125,1.65e-11,9;UBERON:0002308,1.65e-11,9;UBERON:0007023,5.72e-11,114;UBERON:0005383,1.73e-09,3;UBERON:0005382,1.73e-09,3;UBERON:0000988,2.14e-09,3;UBERON:0001049,2.30e-09,56;UBERON:0005068,2.30e-09,56;UBERON:0006241,2.30e-09,56;UBERON:0007135,2.30e-09,56;UBERON:0000073,4.43e-08,53;UBERON:0002616,4.43e-08,53;UBERON:0001301,4.89e-08,1;UBERON:0002171,8.84e-08,1;UBERON:0006518,8.84e-08,1;UBERON:0008949,8.84e-08,1;UBERON:0000101,8.84e-08,1;UBERON:0002167,8.84e-08,1;UBERON:0000369,2.55e-07,4;UBERON:0002435,2.55e-07,4;UBERON:0000204,2.55e-07,4;UBERON:0010082,2.55e-07,4;UBERON:0002420,6.44e-07,9;UBERON:0007245,6.44e-07,9;UBERON:0010009,6.44e-07,9;UBERON:0010011,6.44e-07,9;UBERON:0000454,6.44e-07,9 | |||
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| ||
|short_description=p4@IL5RA | |||
}} | }} |
Latest revision as of 22:31, 17 September 2015
Short description: | p4@IL5RA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL5RA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000353055, ENST00000427088, ENST00000438560, ENST00000446632, ENST00000466722, NM_000564, NM_001243099, NM_175724, NM_175725, NM_175726, NM_175727, NM_175728, uc010hbs.2, uc010hbt.2, uc010hbu.2, uc011ask.1, uc011asl.1, uc011asm.1, uc011asn.1_5end |
EntrezGene: | IL5RA |
HGNC: | 6017 |
UniProt: | C9J3K8B4E2G0Q01344Q8NHV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.14e-19 | 3 |
pro-NK cell | 5.14e-19 | 3 |
mast cell | 1.74e-12 | 5 |
basophil mast progenitor cell | 1.74e-12 | 5 |
lymphocyte | 8.93e-10 | 53 |
common lymphoid progenitor | 8.93e-10 | 53 |
CD8-positive, alpha-beta T cell | 4.97e-09 | 11 |
lymphoid lineage restricted progenitor cell | 4.55e-08 | 52 |
endocrine cell | 3.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.91e-07 | 1 |