FFCP PHASE1:Hg19::chr11:3862549..3862576,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=391 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=672 | |||
|TSSclassifier=strong | |||
|UniProt=P84095,Q6ICQ8 | |||
|association_with_transcript=-336bp_to_ENST00000351018,NM_001665,uc001lyu.2_5end | |||
|cluster_id=chr11:3862549..3862576,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_RHOG_5end | |||
|id=chr11:3862549..3862576,- | |||
|ontology_enrichment_celltype=CL:0000048!1.88e-41!430;CL:0000723!4.48e-40!436;CL:0000034!3.57e-39!444;CL:0000134!3.14e-34!358;CL:0002320!3.45e-34!365;CL:0000037!2.51e-31!172;CL:0000566!2.51e-31!172;CL:0000988!5.14e-31!182;CL:0002032!1.52e-30!165;CL:0000837!1.52e-30!165;CL:0000738!2.25e-29!140;CL:0002371!2.28e-27!591;CL:0002087!2.39e-25!119;CL:0002031!3.26e-25!124;CL:0000219!3.43e-25!390;CL:0000144!2.04e-24!625;CL:0000763!6.32e-23!112;CL:0000049!6.32e-23!112;CL:0000766!1.77e-22!76;CL:0002057!2.13e-22!42;CL:0000003!2.02e-21!722;CL:0000860!6.37e-21!45;CL:0000012!3.88e-20!682;CL:0000557!7.16e-20!71;CL:0000548!8.22e-19!679;CL:0000004!8.22e-19!679;CL:0000255!8.22e-19!679;CL:0000839!2.36e-18!70;CL:0002009!2.87e-18!65;CL:0002194!1.50e-17!63;CL:0000576!1.50e-17!63;CL:0000040!1.50e-17!63;CL:0000559!1.50e-17!63;CL:0000063!4.19e-12!578;CL:0000542!2.36e-07!53;CL:0000051!2.36e-07!53;CL:0000838!4.37e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.18e-25;33!CL:0002057;1.18e-25;33!CL:0000473;9.17e-23;39!CL:0000234;9.17e-23;39!CL:0000576;8.25e-15;48!CL:0000766;2.21e-14;69!CL:0000763;1.03e-09;100!CL:0002087;4.33e-09;104!CL:0000738;9.96e-08;136!CL:0000624;8.35e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.87e-32,177;CL:0000037,6.43e-32,168;CL:0000738,2.23e-31,136;CL:0002032,1.86e-30,161;CL:0000837,1.86e-30,161;CL:0000766,7.86e-30,72;CL:0000048,1.60e-29,427;CL:0000473,1.96e-28,48;CL:0000234,1.96e-28,48;CL:0000034,2.78e-28,441;CL:0000723,2.82e-28,433;CL:0000763,1.20e-26,108;CL:0000049,1.20e-26,108;CL:0002031,1.34e-26,120;CL:0000860,1.35e-26,42;CL:0002057,1.35e-26,42;CL:0000557,5.43e-26,67;CL:0000134,6.52e-26,354;CL:0002087,7.48e-26,115;CL:0002320,6.96e-25,361;CL:0000839,2.99e-24,66;CL:0002009,3.93e-23,61;CL:0002194,4.47e-22,59;CL:0000576,4.47e-22,59;CL:0000040,4.47e-22,59;CL:0000559,4.47e-22,59;CL:0000219,8.99e-20,386;CL:0000624,9.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-20;42!CL:0000049;3.47e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.37e-32!375;UBERON:0002371!3.98e-20!80;UBERON:0002390!1.54e-19!102;UBERON:0003061!1.54e-19!102;UBERON:0002204!2.36e-19!167;UBERON:0001474!8.30e-18!86;UBERON:0002193!2.87e-17!112;UBERON:0004765!5.49e-16!101;UBERON:0001434!5.49e-16!101;UBERON:0003081!6.97e-14!216;UBERON:0002405!5.95e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.44e-26,76;UBERON:0002390,8.99e-25,98;UBERON:0003061,8.99e-25,98;UBERON:0002384,1.52e-24,371;UBERON:0001474,3.31e-23,82;UBERON:0002193,3.41e-21,108;UBERON:0004765,5.71e-20,90;UBERON:0002405,5.72e-20,93;UBERON:0001434,9.53e-19,100;UBERON:0003081,1.21e-18,203;UBERON:0002204,2.73e-18,167;UBERON:0000926,1.95e-13,315;UBERON:0004120,1.95e-13,315;UBERON:0006603,1.95e-13,315 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.845726424575827,2.00146596706261,1.34088328328186,0,2.53299878168311,2.52687949370732,0.522371256399677,0.737201809504527,2.09340350391728,2.62129646556207,2.63766978228454,0.495065411840187,0.331397375727916,0.672325146451775,0,5.84248072309899,1.46379839637152,0.492484232307152,0.204000691244253,0,0,0.136874425072884,0,0.534893840235659,0.738905305049512,0.708397031823113,5.11373559903575,1.91914699048606,3.56077083626975,0,0.30120591877825,0,0.542270404062111,0.568676929949686,2.64240395401362,4.43196326825502,8.02177789880567,8.68043482863407,0.447830948479849,0.971680998056939,1.03030227053675,4.9435401185052,5.29026321164333,3.63876091781724,9.99444858694444,9.86802931252382,12.078548464909,5.46615545412086,6.91633907628572,7.56743135643473,15.8583013138845,11.6187243045089,13.5426486594342,6.21199720490596,10.643339852256,10.1125568000288,14.3859429414324,11.8743740018155,10.2293940127847,4.28806690242731,4.9865914405408,4.26224750532694,30.1817608173727,28.369261234557,27.4041789558053,5.52747063564835,6.25779502104242,5.42972111762792,20.5835830895345,18.7821594353658,21.5194423459801,0.845021145247767,2.12604299965044,0.838634582033504,1.12328631146495,0.901061357049038,0.803627933485401,0.570025487482497,0.99458338599545,1.0959849225878,0,2.73069305631066,3.55803701545422,1.28019066769952,1.20118796110804,0.574752439954483,0.661044872784862,0.954053754535364,4.55370375287559,0.587237189370939,4.20500550937752,2.64342657158052,14.5732226375199,0.790152254325231,5.31116379307349,9.03924754323079,5.14003747498773,0.334372990781356,5.54067853277104,0.946895611469467,3.89653456815823,1.44833593950726,4.41908861212256,1.32920336750173,1.62482318259009,1.92136979588513,1.56071217071854,0.328875809207352,0.829050053357545,0.869409257205157,2.96573126324121,1.07016331235885,0,0,3.44898444241729,1.37450978193052,1.77113784413652,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,0.127986611154418,1.24930726552346,0,0.821127996921047,2.82249440514625,9.09296665663925,5.93780055919476,2.43806866313962,0.670700859703636,0.511450247374121,0,0,0.724232594804119,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,1.06366368415092,0.476981248610684,0.571994910780128,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0,0,0,1.53316637465883,0,0.183201743930407,3.9534125230819,3.87780264148325,0,1.49091585508596,1.8994576749687,0.662045904066094,0,0.354668382198357,0,2.1349799145941,2.96001058100592,0.311211035399766,0.67355336034844,0.490385709340376,0.756787138224657,1.15235184896,0.468642863667593,1.24864030732128,0,1.04614076386261,0.587172493218824,0.485618833104395,1.40450806702248,0.61246251376468,0.982674538494144,0.619954687054593,1.18800285728205,0,0,2.15585442544872,0,0.375355559615893,0.277064115484183,1.31693286264251,1.5324389789951,0.600952235626387,0.907457465280168,1.07633781413317,1.2813443329114,0.423863802319124,0.300091096084402,1.13357782162283,0.515281080091258,0.37223371266318,0.337552664482532,0.389748020644795,1.7670364197088,0.368199594569197,0.484938170456436,0,0.906768884048762,1.86516651541536,1.73934767846967,0.818238361772504,0.573609190778008,0,0,0,0,0,0,10.9514672630871,1.92972281457866,2.76269842704961,2.78620756819187,3.60939740834793,2.72105640091641,1.01150814046861,1.44606617930089,2.53676137284506,2.17879444092406,2.60997681022206,2.96628877952362,2.74710051175484,1.53898862778556,0,0,0.8231480226628,1.47008711385542,0,0.982827216677626,0,0,0,0,0.768251997860379,0,0.100528972411631,0.462942225792648,1.3032332212413,0,1.44331342025273,0.231860809950154,0.352226082707465,0.288732895522148,0.462985512576611,0.190254152234598,0,0,1.47730203652438,2.57404691653161,1.78357394746474,0,0.671928512795438,0.283550194484773,0.179117045405697,0.581267877027924,0,1.97065295158377,2.20121085033065,5.59785911960085,3.60299883542404,8.2057581727147,0.190493682876507,0,0,0,0.102827492703324,0,0,0.448524337381443,0.43596006883328,0.7333828582095,0.387815147273333,14.3062578340753,1.690605505112,0.26593811658487,0,1.02882949704857,2.83698264046557,1.5985330740966,0.714889968290738,0,1.64648067356154,2.28015329005615,0.355391948742546,0,1.20575750823834,0,2.19940580600526,4.86495122564762,1.50677127429638,0,1.67737398844108,0,0,1.88215698667853,1.43833425785268,1.25342674267927,0,3.34952292343276,8.62510299438069,10.6524720112191,0,0,2.31986643833309,0.167516265334349,0,5.24304916763028,0,1.65766205374414,0.24538298343828,1.00034104211935,0.542530047399471,0.623912584592421,0.892144943985809,0.630809660135739,0.468565659970853,0.601892199455438,0,2.0694614258501,1.32845119707087,1.84369168541703,1.21637060255316,0.979005787313703,0,3.3082884179662,6.47142602455851,5.12292277456533,3.33440328590885,1.66435439510497,8.46692821323105,0.992431231275107,0.306923946576125,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| |||
|short_description=p5@RHOG | |||
}} |
Latest revision as of 22:29, 17 September 2015
Short description: | p5@RHOG |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RHOG_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -336bp_to_ENST00000351018, NM_001665, uc001lyu.2_5end |
EntrezGene: | RHOG |
HGNC: | 672 |
UniProt: | P84095Q6ICQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.87e-32 | 177 |
hematopoietic stem cell | 6.43e-32 | 168 |
leukocyte | 2.23e-31 | 136 |
hematopoietic oligopotent progenitor cell | 1.86e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-30 | 161 |
myeloid leukocyte | 7.86e-30 | 72 |
multi fate stem cell | 1.60e-29 | 427 |
defensive cell | 1.96e-28 | 48 |
phagocyte | 1.96e-28 | 48 |
stem cell | 2.78e-28 | 441 |
somatic stem cell | 2.82e-28 | 433 |
myeloid cell | 1.20e-26 | 108 |
common myeloid progenitor | 1.20e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 1.34e-26 | 120 |
classical monocyte | 1.35e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-26 | 42 |
granulocyte monocyte progenitor cell | 5.43e-26 | 67 |
mesenchymal cell | 6.52e-26 | 354 |
nongranular leukocyte | 7.48e-26 | 115 |
connective tissue cell | 6.96e-25 | 361 |
myeloid lineage restricted progenitor cell | 2.99e-24 | 66 |
macrophage dendritic cell progenitor | 3.93e-23 | 61 |
monopoietic cell | 4.47e-22 | 59 |
monocyte | 4.47e-22 | 59 |
monoblast | 4.47e-22 | 59 |
promonocyte | 4.47e-22 | 59 |
motile cell | 8.99e-20 | 386 |
CD4-positive, alpha-beta T cell | 9.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.44e-26 | 76 |
hematopoietic system | 8.99e-25 | 98 |
blood island | 8.99e-25 | 98 |
connective tissue | 1.52e-24 | 371 |
bone element | 3.31e-23 | 82 |
hemolymphoid system | 3.41e-21 | 108 |
skeletal element | 5.71e-20 | 90 |
immune system | 5.72e-20 | 93 |
skeletal system | 9.53e-19 | 100 |
lateral plate mesoderm | 1.21e-18 | 203 |
musculoskeletal system | 2.73e-18 | 167 |
mesoderm | 1.95e-13 | 315 |
mesoderm-derived structure | 1.95e-13 | 315 |
presumptive mesoderm | 1.95e-13 | 315 |