FFCP PHASE1:Hg19::chr12:25205852..25205862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4033 | |EntrezGene=4033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |HGNC=6690 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3C2 | |UniProt=G3V3C2 | ||
|association_with_transcript=-16bp_to_ENST00000554272_5end | |association_with_transcript=-16bp_to_ENST00000554272_5end | ||
|cluster_id=chr12:25205852..25205862,+ | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_6_at_LRMP_5end | |description=CAGE_peak_6_at_LRMP_5end | ||
|id=chr12:25205852..25205862,+ | |id=chr12:25205852..25205862,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.21e-47!172;CL:0000566!2.21e-47!172;CL:0002032!3.07e-45!165;CL:0000837!3.07e-45!165;CL:0000988!9.26e-43!182;CL:0000738!1.38e-40!140;CL:0002031!5.15e-39!124;CL:0002087!2.18e-35!119;CL:0000763!6.42e-30!112;CL:0000049!6.42e-30!112;CL:0000557!1.63e-26!71;CL:0000766!9.04e-25!76;CL:0000839!4.61e-24!70;CL:0002009!5.60e-23!65;CL:0002194!3.56e-21!63;CL:0000576!3.56e-21!63;CL:0000040!3.56e-21!63;CL:0000559!3.56e-21!63;CL:0000945!1.64e-16!24;CL:0000826!1.64e-16!24;CL:0002057!3.60e-15!42;CL:0000860!1.68e-13!45;CL:0000542!2.08e-13!53;CL:0000051!2.08e-13!53;CL:0000838!9.56e-13!52;CL:0000236!3.22e-07!14;CL:0000134!3.90e-07!358 | |ontology_enrichment_celltype=CL:0000037!2.21e-47!172;CL:0000566!2.21e-47!172;CL:0002032!3.07e-45!165;CL:0000837!3.07e-45!165;CL:0000988!9.26e-43!182;CL:0000738!1.38e-40!140;CL:0002031!5.15e-39!124;CL:0002087!2.18e-35!119;CL:0000763!6.42e-30!112;CL:0000049!6.42e-30!112;CL:0000557!1.63e-26!71;CL:0000766!9.04e-25!76;CL:0000839!4.61e-24!70;CL:0002009!5.60e-23!65;CL:0002194!3.56e-21!63;CL:0000576!3.56e-21!63;CL:0000040!3.56e-21!63;CL:0000559!3.56e-21!63;CL:0000945!1.64e-16!24;CL:0000826!1.64e-16!24;CL:0002057!3.60e-15!42;CL:0000860!1.68e-13!45;CL:0000542!2.08e-13!53;CL:0000051!2.08e-13!53;CL:0000838!9.56e-13!52;CL:0000236!3.22e-07!14;CL:0000134!3.90e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.94e-26;24!CL:0000236;1.50e-12;13!CL:0000097;3.31e-09;5!CL:0000542;7.62e-09;53!CL:0000763;2.90e-07;100!CL:0001014;6.22e-07;2!CL:0001016;6.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.38e-30,161;CL:0000837,4.38e-30,161;CL:0000037,2.57e-28,168;CL:0000945,2.45e-26,24;CL:0000826,2.45e-26,24;CL:0000988,2.99e-26,177;CL:0002031,9.40e-24,120;CL:0000738,9.68e-23,136;CL:0000763,6.05e-17,108;CL:0000049,6.05e-17,108;CL:0002087,2.07e-16,115;CL:0000236,2.18e-14,14;CL:0000838,5.67e-13,52;CL:0000542,1.21e-12,53;CL:0000051,1.21e-12,53;CL:0000557,1.66e-11,67;CL:0000766,1.87e-10,72;CL:0000097,3.70e-09,5;CL:0002028,3.70e-09,5;CL:0000839,3.96e-09,66;CL:0000817,4.59e-09,3;CL:0002009,7.16e-08,61;CL:0002393,9.11e-08,9;CL:0002397,9.11e-08,9;CL:0000134,3.04e-07,354;CL:0001014,6.56e-07,2;CL:0001016,6.56e-07,2;CL:0002320,6.82e-07,361;CL:0000785,7.15e-07,2;CL:0000955,7.15e-07,2;CL:0000818,7.15e-07,2;CL:0000954,7.15e-07,2;CL:0000816,7.15e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;7.62e-09;53!CL:0000954;9.06e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.58e-16!51;DOID:0060083!1.58e-16!51;DOID:1240!6.47e-11!39;DOID:8692!2.22e-09!31;DOID:0060058!2.61e-07!10 | |ontology_enrichment_disease=DOID:2531!1.58e-16!51;DOID:0060083!1.58e-16!51;DOID:1240!6.47e-11!39;DOID:8692!2.22e-09!31;DOID:0060058!2.61e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.42e-10;51!DOID:0060083;1.42e-10;51!DOID:8692;1.57e-10;31!DOID:0060058;2.31e-10;10!DOID:1240;2.17e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.34e-19,51;DOID:0060083,1.34e-19,51;DOID:1240,4.86e-11,39;DOID:8692,8.79e-11,31;DOID:0060058,1.86e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.04e-31!112;UBERON:0002390!2.22e-30!102;UBERON:0003061!2.22e-30!102;UBERON:0002371!6.33e-24!80;UBERON:0007023!8.16e-23!115;UBERON:0001474!5.20e-21!86;UBERON:0002405!2.53e-20!115;UBERON:0004765!6.37e-17!101;UBERON:0001434!6.37e-17!101;UBERON:0001049!1.75e-07!57;UBERON:0005068!1.75e-07!57;UBERON:0006241!1.75e-07!57;UBERON:0007135!1.75e-07!57;UBERON:0003080!5.73e-07!42;UBERON:0002619!6.44e-07!22;UBERON:0002020!7.62e-07!34;UBERON:0003528!7.62e-07!34;UBERON:0001893!8.57e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.40e-18,108;UBERON:0002390,2.96e-16,98;UBERON:0003061,2.96e-16,98;UBERON:0002405,9.95e-15,93;UBERON:0002371,8.83e-11,76;UBERON:0001474,1.25e-09,82;UBERON:0004765,2.41e-08,90;UBERON:0001434,4.84e-07,100;UBERON:0002384,6.16e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,1.64201178899891,1.33808328233255,0,0,0.309632246632152,0,0,0,4.880433636559,3.69640004467296,0.293600439334847,0.553995408531877,0,0,0.671746422719773,1.94336199611388,1.80302897343931,0.726991193897824,0.377875943688809,1.94067248950253,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0.674170453335254,0.306083892370903,0.962787081228281,0.639337125799041,0.659702600373432,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0.868755378820466,0,1.10483290796269,0.632924774881769,1.69004229049553,2.55125159958052,1.67726916406701,0.44931452458598,0.750884464207532,0.48217676009124,0.570025487482497,2.38700012638908,1.27864907635244,0,1.09227722252426,1.77901850772711,1.28019066769952,0,0.574752439954483,1.32208974556972,0,1.70763890732835,0,2.6759125968766,1.32171328579026,1.68152568894461,0,0.196709770113833,0,0.205601498999509,0,0,1.4203434172042,0,0,0,0,0,0,0.130059347559878,0.164437904603676,1.10540007114339,0,0,0.535081656179426,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.639933055772092,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.870648686496336,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0.516833518338658,1.77883131343355,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.468008530278475,0.743155811443641,0,0,0,0,0,0,1.47798971368783,0.44024217006613,1.65862492432618,2.01767934783746,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,2.99602809578873,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,3.0585488285695,0.569647187174163,1.42939065274673,0.411362273086194,1.94541993357815,3.7802200606668,0,0,0,0,0.929015875628594,1.298422916788,1.63626239701352,0.159426272728822,1.99579371432817,0.5745161103971,1.05836791361941,1.29848776109822,0,1.82587743226554,0,0,0.169291777801603,3.37234957717769,2.01799707191048,8.0910785161162,0.343505344755765,1.53620382154229,3.13146551049382,2.0021897005429,2.9308214310306,0,0,0.540911356951966,0,0,0,1.61158997199083,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.398495976502139,1.65770349318689,0,0,0.861593638227486,0,0,0,1.02314474045374,0.197286811273867,0,0,0,0.649376687132959,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0.802577647298789,0,2.00700268137233,0.19566461893209,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.696418755514666,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.677386656526276,1.59045937961861,0.272406812223151,0,0,0,5.62434728878751,1.5476039091159,0.242998226632099,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.828478110694391,1.9846640872478,0.395223263795889,9.0126522801863,0,0,0,0.306345576763462,0,0,0,0.488105059607853,0.500763722825999,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,1.59989916683944,0.106691729694141,1.72214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,104.649535616663,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0,0,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.202612753855184,1.56215619722769,0.620060389503552,0.126831620387814,0,0,0,0,0,0,2.01770233331294,0,0,0.266107110487916,1.72850981333669,0,1.01954599465248,0.263091094251396,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,0,0,0.490296643507811,0,0.785233868459781,0,0,0,0.657887425858975,1.4180735354187,1.79894080664872,0,0,0,0.730336388246517,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0.413731983447581,0.426467963801962,0,0.904244737704086,1.36564371450887,0,0.0636471582781649,0,0,0,1.81850543139386,0.358611026963382,0,0,0,0,0,0,0,0,1.331513548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| ||
|short_description=p6@LRMP | |short_description=p6@LRMP | ||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p6@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRMP_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | -16bp_to_ENST00000554272_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | G3V3C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.40e-18 | 108 |
hematopoietic system | 2.96e-16 | 98 |
blood island | 2.96e-16 | 98 |
immune system | 9.95e-15 | 93 |
bone marrow | 8.83e-11 | 76 |
bone element | 1.25e-09 | 82 |
skeletal element | 2.41e-08 | 90 |
skeletal system | 4.84e-07 | 100 |
connective tissue | 6.16e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.34e-19 | 51 |
immune system cancer | 1.34e-19 | 51 |
leukemia | 4.86e-11 | 39 |
myeloid leukemia | 8.79e-11 | 31 |
lymphoma | 1.86e-10 | 10 |