FFCP PHASE1:Hg19::chr12:25205666..25205690,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:25205666..25205690,+ to FFCP PHASE1:Hg19::chr12:25205666..25205690,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4033 | |EntrezGene=4033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |HGNC=6690 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547044,ENST00000549437_5end | |||
|cluster_id=chr12:25205666..25205690,+ | |||
|coexpression_cluster_id=C2203 | |||
|description=CAGE_peak_4_at_LRMP_5end | |||
|id=chr12:25205666..25205690,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.39e-80!172;CL:0000566!2.39e-80!172;CL:0002032!5.96e-75!165;CL:0000837!5.96e-75!165;CL:0000988!2.29e-73!182;CL:0000738!7.66e-67!140;CL:0000763!6.98e-55!112;CL:0000049!6.98e-55!112;CL:0002031!7.61e-54!124;CL:0002087!1.34e-51!119;CL:0000766!2.45e-42!76;CL:0000557!4.95e-37!71;CL:0000839!6.74e-36!70;CL:0002009!2.90e-33!65;CL:0002194!3.08e-32!63;CL:0000576!3.08e-32!63;CL:0000040!3.08e-32!63;CL:0000559!3.08e-32!63;CL:0002057!3.76e-32!42;CL:0000860!1.17e-28!45;CL:0000945!2.14e-19!24;CL:0000826!2.14e-19!24;CL:0000542!1.22e-16!53;CL:0000051!1.22e-16!53;CL:0000838!4.98e-16!52;CL:0000134!8.00e-14!358;CL:0002320!1.10e-12!365;CL:0000236!6.29e-12!14;CL:0000219!3.96e-09!390;CL:0002393!5.38e-09!9;CL:0002397!5.38e-09!9;CL:0000094!2.37e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.78e-33;33!CL:0002057;9.78e-33;33!CL:0000576;4.15e-32;48!CL:0000945;3.52e-28;24!CL:0000766;4.78e-27;69!CL:0000473;2.65e-26;39!CL:0000234;2.65e-26;39!CL:0000763;2.66e-20;100!CL:0002087;2.23e-19;104!CL:0000738;7.30e-18;136!CL:0000236;7.41e-16;13!CL:0000988;3.12e-15;177!CL:0000094;1.19e-11;8!CL:0000542;2.98e-10;53!CL:0002393;1.09e-08;6!CL:0002397;1.09e-08;6!CL:0000081;7.08e-08;11!CL:0000219;1.35e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.79e-90,168;CL:0000988,6.10e-84,177;CL:0002032,4.79e-83,161;CL:0000837,4.79e-83,161;CL:0000738,7.99e-83,136;CL:0002031,9.48e-66,120;CL:0002087,5.72e-65,115;CL:0000763,1.74e-64,108;CL:0000049,1.74e-64,108;CL:0000766,8.00e-63,72;CL:0000557,3.79e-53,67;CL:0000839,8.20e-52,66;CL:0002194,1.35e-47,59;CL:0000576,1.35e-47,59;CL:0000040,1.35e-47,59;CL:0000559,1.35e-47,59;CL:0002009,1.62e-47,61;CL:0000860,2.57e-47,42;CL:0002057,2.57e-47,42;CL:0000473,2.68e-45,48;CL:0000234,2.68e-45,48;CL:0000945,3.37e-28,24;CL:0000826,3.37e-28,24;CL:0000134,1.65e-23,354;CL:0002320,2.25e-22,361;CL:0000219,2.05e-18,386;CL:0000236,4.99e-17,14;CL:0000542,6.99e-16,53;CL:0000051,6.99e-16,53;CL:0000838,4.32e-15,52;CL:0000034,9.35e-15,441;CL:0000048,1.35e-14,427;CL:0000723,6.19e-14,433;CL:0002393,1.18e-12,9;CL:0002397,1.18e-12,9;CL:0000094,1.07e-11,8;CL:0000081,6.59e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.01e-34;42!CL:0000049;2.46e-17;108!CL:0000051;2.98e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!9.35e-16!51;DOID:0060083!9.35e-16!51;DOID:1240!4.57e-12!39;DOID:8692!6.81e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.86e-07;51!DOID:0060083;1.86e-07;51!DOID:0060058;3.52e-07;10!DOID:8692;8.13e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.33e-13,51;DOID:0060083,2.33e-13,51;DOID:1240,5.05e-08,39;DOID:0060058,2.43e-07,10;DOID:8692,4.38e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.00e-43!102;UBERON:0003061!2.00e-43!102;UBERON:0002193!3.75e-42!112;UBERON:0002371!1.13e-33!80;UBERON:0001474!2.50e-29!86;UBERON:0002405!5.17e-26!115;UBERON:0004765!1.08e-21!101;UBERON:0001434!1.08e-21!101;UBERON:0007023!3.50e-19!115;UBERON:0002384!1.46e-11!375;UBERON:0000178!6.94e-09!15;UBERON:0000179!6.94e-09!15;UBERON:0000463!6.94e-09!15;UBERON:0003081!3.03e-08!216;UBERON:0002619!8.44e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.60e-12;15!UBERON:0000179;5.60e-12;15!UBERON:0000463;5.60e-12;15!UBERON:0002390;1.03e-10;32!UBERON:0002193;4.76e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.44e-63,98;UBERON:0003061,7.44e-63,98;UBERON:0002193,8.20e-61,108;UBERON:0002405,7.08e-49,93;UBERON:0002371,3.60e-48,76;UBERON:0001474,4.12e-43,82;UBERON:0004765,1.95e-37,90;UBERON:0001434,1.19e-31,100;UBERON:0002384,2.10e-21,371;UBERON:0003081,1.09e-18,203;UBERON:0000178,4.62e-12,15;UBERON:0000179,4.62e-12,15;UBERON:0000463,4.62e-12,15;UBERON:0002204,1.54e-11,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,10.927117021957,10.2625736812432,11.3343525091698,5.50709987588466,6.90892916574983,6.34746105595912,0,0.30120591877825,0,4.880433636559,15.7807848061038,2.05520307534393,5.53995408531877,7.01905566145496,6.07630438004385,4.25439401055856,5.18229865630367,3.60605794687861,8.57849608799432,7.17964293008738,7.03493777444667,7.67015821788759,4.52284676824008,4.33588919253145,3.45230870786581,7.68482119587302,8.27687804610048,8.96338769915208,10.973239620925,10.8341189275473,6.21199720490596,3.82068610080984,4.04502272001152,7.65209730927256,7.06043859567406,14.7047538933779,2.96866170168044,3.98927315243264,4.68847225585964,4.64334781805734,3.97169657283798,3.73693349397345,3.26623264833766,4.69334626578181,5.86409880703815,6.05399502633369,5.89244217580104,6.32924774881769,22.1818050627539,19.346991296819,16.7726916406701,13.0301212129934,11.7137976416375,13.983126042646,23.3710449867824,26.6548347446781,22.2850267592853,5.27988733383968,9.28435639145624,8.89509253863555,4.69403244823158,7.20712776664822,7.47178171940828,9.91567309177293,3.81621501814146,6.26134266020393,10.5702694086769,10.3213771593812,9.25199300053181,3.36305137788922,4.47752944117631,0,1.17903228824749,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0.451725357233318,0.127986611154418,1.24930726552346,1.65744076430812,0.821127996921047,0.403213486449465,1.33720097891754,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,1.39303789839414,1.59549552622638,5.96226560763355,6.29194401858141,5.20040501861391,0,0,0,0,0,0,0,0.775250277507987,1.06729878806013,1.00416183829401,0,0,0.24406205754817,0,0,0,0,0,0,0,0,86.9750755078017,73.6782501881818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,1.7658523976586,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,0.936017060556951,0.594524649154913,0,0,0,0,0,0,1.97065295158377,3.43388892651582,4.56121854189699,6.3412779503463,3.7872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.00451418286425,0,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,0.898401253958239,0,0,0,0,0,107.108004424447,125.64781286569,89.9281664156197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,6.47142602455851,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.510450849978337,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,29.4319613354658,22.9391162142713,23.9251818613148,19.2967738120809,21.8022004735683,23.9935125141305,28.081634736382,24.5868804651224,0,0,0,5.75989842889728,6.20357615798713,1.77854608371035,0.159426272728822,2.99369057149225,0.191505370132367,1.69338866179106,3.57084134302011,0.561594356226918,2.05411211129873,2.50687833236837,0,1.69291777801603,5.45999455352578,4.84319297258514,3.83261613921294,1.37402137902306,0.921722292925374,4.02616994206349,2.50273712567863,0.781552381608161,0,1.23087398947712,6.49093628342359,0.66614393599564,2.81974010175699,0.18714054040822,1.02555725490326,0,0.557216921387392,0,0,0.296964680832639,0,1.9882952955326,1.82870241333667,0,0,0,0.19924798825107,5.24939439509181,0,0,3.56945935837101,0,0,0,2.55786185113436,1.08507746200627,4.7896618469388,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0.0897576444097721,0,0,0,0,0,0.627921025580099,3.15802195610297,0.225595660617181,0.392125068635479,0.335643173951685,0,2.38404868470568,0,0,0.424059214301822,0,0.995261931078505,0.353830258013357,0,0,0,0.104421949505455,0.404406797884062,0,0,12.2244708774496,0.391329237864179,0,0,2.41981432097328,0,2.52746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,1.39283751102933,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,3.83239764200917,0.859530882839914,1.31443677139657,0,0,0,0.399358000997982,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,2.62487329403932,2.38568906942791,0.681017030557878,0,0,0,5.17439950568451,0.77380195455795,1.15424157650247,0,0.236417121897595,0.209818352539992,0,0.35857467866569,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0.146552233678082,0,0,0.39669780522807,0,0,0.747511887973863,0.471612915298998,0.828478110694391,3.47316215268366,7.90446527591777,18.8778527490389,0,0.544017803369474,0.2506898940227,0,0.327872630709804,0,0.886068179966986,2.19647276823534,1.3771002377715,0.573409195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| ||
|short_description=p4@LRMP | |||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p4@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRMP_5end |
Coexpression cluster: | C2203_non_Neutrophils_Eosinophils_lymphoma_CD19_Whole_Burkitt |
Association with transcript: | 0bp_to_ENST00000547044, ENST00000549437_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.44e-63 | 98 |
blood island | 7.44e-63 | 98 |
hemolymphoid system | 8.20e-61 | 108 |
immune system | 7.08e-49 | 93 |
bone marrow | 3.60e-48 | 76 |
bone element | 4.12e-43 | 82 |
skeletal element | 1.95e-37 | 90 |
skeletal system | 1.19e-31 | 100 |
connective tissue | 2.10e-21 | 371 |
lateral plate mesoderm | 1.09e-18 | 203 |
blood | 4.62e-12 | 15 |
haemolymphatic fluid | 4.62e-12 | 15 |
organism substance | 4.62e-12 | 15 |
musculoskeletal system | 1.54e-11 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.33e-13 | 51 |
immune system cancer | 2.33e-13 | 51 |
leukemia | 5.05e-08 | 39 |
lymphoma | 2.43e-07 | 10 |
myeloid leukemia | 4.38e-07 | 31 |