FFCP PHASE1:Hg19::chr12:25205446..25205566,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |||
|TSSclassifier=strong | |||
|UniProt=Q12912,F5H006,G3V513 | |||
|association_with_transcript=0bp_to_ENST00000354454,ENST00000536173,ENST00000557489_5end | |||
|cluster_id=chr12:25205446..25205566,+ | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_1_at_LRMP_5end | |||
|id=chr12:25205446..25205566,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.54e-68!172;CL:0000566!7.54e-68!172;CL:0000988!3.81e-63!182;CL:0002032!1.09e-62!165;CL:0000837!1.09e-62!165;CL:0000738!3.63e-60!140;CL:0002031!4.90e-49!124;CL:0002087!2.10e-47!119;CL:0000542!1.61e-35!53;CL:0000051!1.61e-35!53;CL:0000838!1.12e-34!52;CL:0000763!5.16e-27!112;CL:0000049!5.16e-27!112;CL:0000766!8.49e-20!76;CL:0000945!5.35e-18!24;CL:0000826!5.35e-18!24;CL:0000557!1.05e-15!71;CL:0000839!1.31e-15!70;CL:0000084!1.75e-15!25;CL:0000827!1.75e-15!25;CL:0002009!1.42e-13!65;CL:0002194!7.80e-13!63;CL:0000576!7.80e-13!63;CL:0000040!7.80e-13!63;CL:0000559!7.80e-13!63;CL:0000791!1.07e-12!18;CL:0000789!1.07e-12!18;CL:0002420!1.07e-12!18;CL:0002419!1.07e-12!18;CL:0000790!1.07e-12!18;CL:0002057!1.25e-10!42;CL:0000236!3.03e-10!14;CL:0000860!4.61e-09!45;CL:0000625!1.05e-08!11;CL:0000134!3.23e-08!358;CL:0002320!2.93e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.32e-22;53!CL:0000945;1.57e-20;24!CL:0000084;8.77e-17;25!CL:0002087;1.84e-14;104!CL:0000791;1.93e-14;18!CL:0000789;1.93e-14;18!CL:0002419;1.93e-14;18!CL:0000738;1.72e-13;136!CL:0000988;3.59e-11;177!CL:0000236;1.11e-10;13!CL:0000625;8.18e-10;11!CL:0000766;1.09e-09;69!CL:0000763;1.75e-08;100!CL:0000576;8.93e-08;48!CL:0000094;3.75e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.73e-71,168;CL:0000738,1.53e-66,136;CL:0002032,2.91e-65,161;CL:0000837,2.91e-65,161;CL:0000988,1.66e-64,177;CL:0002031,1.26e-54,120;CL:0002087,1.40e-53,115;CL:0000542,6.86e-40,53;CL:0000051,6.86e-40,53;CL:0000838,6.45e-39,52;CL:0000763,3.24e-26,108;CL:0000049,3.24e-26,108;CL:0000766,2.73e-22,72;CL:0000945,1.55e-20,24;CL:0000826,1.55e-20,24;CL:0000557,1.31e-17,67;CL:0000839,7.75e-17,66;CL:0000084,8.29e-17,25;CL:0000827,8.29e-17,25;CL:0002009,4.75e-15,61;CL:0000791,2.05e-14,18;CL:0000789,2.05e-14,18;CL:0002420,2.05e-14,18;CL:0002419,2.05e-14,18;CL:0000790,2.05e-14,18;CL:0002194,3.42e-14,59;CL:0000576,3.42e-14,59;CL:0000040,3.42e-14,59;CL:0000559,3.42e-14,59;CL:0000236,1.39e-11,14;CL:0000473,4.99e-11,48;CL:0000234,4.99e-11,48;CL:0000625,8.25e-10,11;CL:0000134,1.72e-09,354;CL:0000860,3.86e-09,42;CL:0002057,3.86e-09,42;CL:0002320,1.34e-08,361;CL:0000094,3.67e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;1.32e-22;53!CL:0000790;1.93e-14;18!CL:0000049;2.27e-07;108!CL:0002057;4.62e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!6.23e-17!51;DOID:0060083!6.23e-17!51;DOID:1240!3.41e-12!39;DOID:8692!2.81e-08!31;DOID:0060058!1.40e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.17e-10;51!DOID:0060083;8.17e-10;51!DOID:1240;6.78e-09;39!DOID:0060058;1.29e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.40e-16,51;DOID:0060083,4.40e-16,51;DOID:1240,3.62e-11,39;DOID:0060058,1.14e-07,10;DOID:8692,5.43e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.91e-25!115;UBERON:0002390!2.74e-23!102;UBERON:0003061!2.74e-23!102;UBERON:0002193!6.47e-23!112;UBERON:0002371!2.52e-13!80;UBERON:0002405!3.48e-12!115;UBERON:0001474!6.07e-11!86;UBERON:0002619!2.45e-08!22;UBERON:0000178!3.18e-08!15;UBERON:0000179!3.18e-08!15;UBERON:0000463!3.18e-08!15;UBERON:0004765!1.20e-07!101;UBERON:0001434!1.20e-07!101;UBERON:0001950!1.96e-07!20;UBERON:0001893!3.93e-07!34;UBERON:0002791!6.93e-07!33;UBERON:0002020!7.82e-07!34;UBERON:0003528!7.82e-07!34;UBERON:0001869!8.16e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.46e-08;22!UBERON:0001950;3.54e-07;20!UBERON:0000178;5.31e-07;15!UBERON:0000179;5.31e-07;15!UBERON:0000463;5.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.57e-25,108;UBERON:0002390,2.78e-25,98;UBERON:0003061,2.78e-25,98;UBERON:0007023,1.11e-20,114;UBERON:0002405,1.50e-19,93;UBERON:0002371,2.35e-15,76;UBERON:0001474,6.34e-13,82;UBERON:0004765,2.78e-10,90;UBERON:0001434,2.95e-08,100;UBERON:0002619,3.55e-08,22;UBERON:0002384,9.39e-08,371;UBERON:0001950,3.60e-07,20;UBERON:0000178,4.94e-07,15;UBERON:0000179,4.94e-07,15;UBERON:0000463,4.94e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.8855727631256,96.9607961403859,117.436485720009,7.47392126012918,23.41359328393,8.97933515233241,0,0,0,367.736801154692,122.834216869132,8.22081230137572,4.9859586767869,9.22504458362652,9.98250005292918,6.49354875295781,8.74512898251245,4.89393578504954,3.34415949192999,6.42389104270976,2.66842467306598,2.32429036905685,2.05583944010913,0.929119112685311,1.7261543539329,2.0492856522328,0.945928919554341,4.48169384957604,0.645484683583826,8.12558919566051,3.01187743268168,1.36453075028923,2.47195832889593,1.83650335422542,2.56743221660875,1.91801137739712,0.989553900560148,1.39624560335142,1.27867425159808,1.16083695451434,2.26954089876456,1.24564449799115,0.75374599577023,1.5644487552606,1.73751075764093,4.23779651843358,2.94622108790052,4.43047342417238,2.74631872205524,1.4882300997553,2.93522103711726,4.15615935242032,4.35512989240368,6.26829788118613,1.42506371870624,1.19350006319454,1.46131323011707,15.839662001519,13.6534652815533,15.1216573156804,19.6295902380593,18.8186113906926,13.7940585589076,19.8313461835459,14.3108063180305,11.9534723512984,13.5064553555316,15.6732023531344,9.25199300053181,11.2101712596307,7.90152254325231,22.424913792977,14.5413982217191,14.3921049299656,1.33749196312542,26.0737813306872,22.7254946752672,27.2757419771076,7.01885878376594,9.42738903919479,8.4182879941776,11.1029584143656,2.0494611156108,1.56071217071854,13.8127839867088,16.3046510493651,21.1556252586588,36.4784945378669,35.8504709640216,30.3153019034433,11.8974809832444,16.0952607312807,22.3357839563709,36.6878553428279,25.4852331459277,18.8814201618361,14.2567806667256,19.5747654801105,20.8618176181702,17.4903017173284,23.4409479523577,13.9591759476578,21.7735282682711,24.0696176205157,24.1856754484274,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.57174890597255,0,0,3.8945687238562,2.43781632218974,2.12732736830184,18.3637780715113,17.1598473234038,11.1437250398869,0.198762407366705,0,0,0,0,0,0.208994966536811,7.49408601591054,3.91342888955381,5.69025041699939,0,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,21.0848667897701,15.511210565933,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,1.96565443335525,0.590789906681404,49.8853302338555,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,7.63272718870932,1.63802985597466,1.93220510975347,0,0,0.141775097242386,0,0,0,19.2138662779418,11.6223932897458,28.6112799446265,28.2475108697244,15.0228495777392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,3.64871341923571,4.01805673145701,4.21667878966063,0,0,0,0,0,0,8.18221551152749,35.071475315943,30.6191156300515,22.5883743852357,0,1.30139853857622,0,0,0,24.717231790257,17.9496875522415,25.2793463195982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6768026122887,19.6299922744941,15.368768323696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,2.14870389969272,1.15314040419064,2.04180339991335,1.51736671283325,0.464845549297286,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.962221127255121,0.670302275535787,0,1.50630081242847,0,1.68471475667626,0.886860307073351,0.229723400206959,19.2830091508224,9.94028369285088,22.7858874869665,15.7232971802141,15.2204041041892,14.9148861574325,19.9811631778102,19.0350042310625,0,0,0,83.239822456322,76.8954905164451,105.005360782259,6.21762463642407,9.77938920020801,3.25559129225023,23.7074412650749,8.44017044713844,4.49275484981534,11.868203309726,1.41011906195721,0,12.358299779517,32.1176150207399,11.7043830170808,10.2203097045678,6.18309620560377,5.8375745218607,10.736453178836,9.67725021929069,3.32159762183469,0.556812347790485,4.92349595790849,5.67956924799565,7.32758329595204,2.81974010175699,2.8071081061233,6.15334352941955,0,1.67165076416218,0,0,0.890894042497916,0,23.8595435463912,22.507106625682,0,0.329607748453519,0,1.79323189425963,44.7579943160459,0,0,23.6322826485253,0,1.43789361835723,0,3.06943422136123,6.90503839458535,11.974154617347,0,0,4.91670920257812,0,0,0,5.79999660347835,0,0,0,0,0,0,0,1.08536794762867,0,0.995213339381022,0.591095237907095,2.4132393686937,0,0,2.6163087891291,0,0,0,0,0.638002319463839,0,0,11.241262801531,2.04074333313532,0.831058409500782,0.225595660617181,0,0.167821586975843,0,2.86085842164682,0.210998064528027,0,0.706765357169704,0,0,2.29989667708682,0.611030144933625,0.296521128680622,0.617819694732514,0.730953646538188,2.02203398942031,4.01288823649394,1.40558667435203,44.8838781470538,3.91329237864179,0,1.97292201424695,4.83962864194656,0.91821828489147,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,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| |||
|short_description=p1@LRMP | |||
}} |
Latest revision as of 22:23, 17 September 2015
Short description: | p1@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRMP_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000354454, ENST00000536173, ENST00000557489_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | Q12912F5H006G3V513 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.57e-25 | 108 |
hematopoietic system | 2.78e-25 | 98 |
blood island | 2.78e-25 | 98 |
adult organism | 1.11e-20 | 114 |
immune system | 1.50e-19 | 93 |
bone marrow | 2.35e-15 | 76 |
bone element | 6.34e-13 | 82 |
skeletal element | 2.78e-10 | 90 |
skeletal system | 2.95e-08 | 100 |
regional part of cerebral cortex | 3.55e-08 | 22 |
connective tissue | 9.39e-08 | 371 |
neocortex | 3.60e-07 | 20 |
blood | 4.94e-07 | 15 |
haemolymphatic fluid | 4.94e-07 | 15 |
organism substance | 4.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.40e-16 | 51 |
immune system cancer | 4.40e-16 | 51 |
leukemia | 3.62e-11 | 39 |
lymphoma | 1.14e-07 | 10 |
myeloid leukemia | 5.43e-07 | 31 |