FFCP PHASE1:Hg19::chr19:3985455..3985465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1938 | |EntrezGene=1938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3214 | |HGNC=3214 | ||
|TSSclassifier=strong | |||
|UniProt=P13639,F5H370 | |UniProt=P13639,F5H370 | ||
|association_with_transcript=0bp_to_ENST00000309311,ENST00000543343,NM_001961,uc002lze.2_5end | |association_with_transcript=0bp_to_ENST00000309311,ENST00000543343,NM_001961,uc002lze.2_5end | ||
|cluster_id=chr19:3985455..3985465,- | |||
|description=CAGE_peak_1_at_EEF2_5end | |description=CAGE_peak_1_at_EEF2_5end | ||
|id=chr19:3985455..3985465,- | |id=chr19:3985455..3985465,- | ||
|ontology_enrichment_celltype=CL:0000144!4.61e-20!625;CL:0002371!2.32e-19!591;CL:0000055!1.40e-16!180;CL:0000183!3.33e-15!59;CL:0000012!3.54e-14!682;CL:0000548!1.10e-13!679;CL:0000004!1.10e-13!679;CL:0000255!1.10e-13!679;CL:0000222!1.77e-13!119;CL:0000187!5.93e-13!54;CL:0000192!1.10e-12!42;CL:0000514!1.10e-12!42;CL:0000680!3.27e-12!57;CL:0000056!3.27e-12!57;CL:0000355!3.27e-12!57;CL:0002321!9.37e-12!248;CL:0000393!9.50e-12!60;CL:0000211!9.50e-12!60;CL:0000220!2.79e-11!246;CL:0000359!4.78e-10!32;CL:0000003!1.44e-07!722 | |ontology_enrichment_celltype=CL:0000144!4.61e-20!625;CL:0002371!2.32e-19!591;CL:0000055!1.40e-16!180;CL:0000183!3.33e-15!59;CL:0000012!3.54e-14!682;CL:0000548!1.10e-13!679;CL:0000004!1.10e-13!679;CL:0000255!1.10e-13!679;CL:0000222!1.77e-13!119;CL:0000187!5.93e-13!54;CL:0000192!1.10e-12!42;CL:0000514!1.10e-12!42;CL:0000680!3.27e-12!57;CL:0000056!3.27e-12!57;CL:0000355!3.27e-12!57;CL:0002321!9.37e-12!248;CL:0000393!9.50e-12!60;CL:0000211!9.50e-12!60;CL:0000220!2.79e-11!246;CL:0000359!4.78e-10!32;CL:0000003!1.44e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.25e-09;43!CL:0000359;2.28e-09;32!CL:0000187;2.57e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.27e-14,121;CL:0000187,2.51e-13,55;CL:0000192,4.55e-13,43;CL:0000514,4.55e-13,43;CL:0000680,1.41e-12,58;CL:0000056,1.41e-12,58;CL:0000355,1.41e-12,58;CL:0002321,3.42e-12,250;CL:0000393,4.18e-12,61;CL:0000211,4.18e-12,61;CL:0000359,4.78e-10,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.25e-09;43!CL:0000355;6.82e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.54e-14!79;UBERON:0007798!2.54e-14!79;UBERON:0004290!2.96e-14!70;UBERON:0000486!3.13e-14!82;UBERON:0000055!1.12e-12!69;UBERON:0001134!3.26e-12!61;UBERON:0002036!3.26e-12!61;UBERON:0003082!3.26e-12!61;UBERON:0000914!3.51e-12!83;UBERON:0002329!3.51e-12!83;UBERON:0003077!3.51e-12!83;UBERON:0003059!3.51e-12!83;UBERON:0007282!3.51e-12!83;UBERON:0009618!3.51e-12!83;UBERON:0007285!3.51e-12!83;UBERON:0002385!4.92e-12!63;UBERON:0001015!4.92e-12!63;UBERON:0000383!4.92e-12!63;UBERON:0004872!1.68e-11!84;UBERON:0004535!3.40e-11!110;UBERON:0001009!4.21e-11!113;UBERON:0001637!7.68e-11!42;UBERON:0003509!7.68e-11!42;UBERON:0004572!7.68e-11!42;UBERON:0001981!1.23e-10!60;UBERON:0007500!1.23e-10!60;UBERON:0004537!1.23e-10!60;UBERON:0006965!1.23e-10!60;UBERON:0003914!2.97e-10!118;UBERON:0005256!4.74e-10!143;UBERON:0000490!5.90e-09!138;UBERON:0004573!2.85e-08!33;UBERON:0004571!2.85e-08!33;UBERON:0002100!1.03e-07!216;UBERON:0005085!6.69e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;5.78e-08;56!UBERON:0001981;5.78e-08;56!UBERON:0004537;5.78e-08;56!UBERON:0001637;1.06e-07;42!UBERON:0003509;1.06e-07;42!UBERON:0004572;1.06e-07;42!UBERON:0004573;1.73e-07;33!UBERON:0004571;1.73e-07;33!UBERON:0000055;2.87e-07;65!UBERON:0003914;3.48e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.04e-16,78;UBERON:0002329,1.27e-14,71;UBERON:0003059,1.27e-14,71;UBERON:0007282,1.27e-14,71;UBERON:0004290,1.27e-14,71;UBERON:0009618,1.27e-14,71;UBERON:0000486,1.38e-14,83;UBERON:0002049,2.11e-14,78;UBERON:0007798,2.11e-14,78;UBERON:0007524,7.20e-14,73;UBERON:0003077,7.40e-14,72;UBERON:0007285,7.40e-14,72;UBERON:0000055,9.27e-13,68;UBERON:0001134,1.42e-12,62;UBERON:0002036,1.42e-12,62;UBERON:0003082,1.42e-12,62;UBERON:0002385,2.17e-12,64;UBERON:0001015,2.17e-12,64;UBERON:0000383,2.17e-12,64;UBERON:0004872,1.49e-11,83;UBERON:0004535,3.19e-11,109;UBERON:0001009,3.97e-11,112;UBERON:0000490,6.46e-11,148;UBERON:0001637,7.68e-11,42;UBERON:0003509,7.68e-11,42;UBERON:0004572,7.68e-11,42;UBERON:0007500,1.02e-10,59;UBERON:0001981,1.02e-10,59;UBERON:0004537,1.02e-10,59;UBERON:0006965,1.02e-10,59;UBERON:0003104,1.23e-10,160;UBERON:0009142,1.23e-10,160;UBERON:0003914,5.74e-10,117;UBERON:0005256,7.29e-09,122;UBERON:0002100,9.72e-09,199;UBERON:0004573,2.85e-08,33;UBERON:0004571,2.85e-08,33 | |||
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| ||
|short_description=p1@EEF2 | |short_description=p1@EEF2 | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p1@EEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309311, ENST00000543343, NM_001961, uc002lze.2_5end |
EntrezGene: | EEF2 |
HGNC: | 3214 |
UniProt: | P13639F5H370 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.27e-14 | 121 |
muscle cell | 2.51e-13 | 55 |
smooth muscle cell | 4.55e-13 | 43 |
smooth muscle myoblast | 4.55e-13 | 43 |
muscle precursor cell | 1.41e-12 | 58 |
myoblast | 1.41e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-12 | 58 |
embryonic cell | 3.42e-12 | 250 |
electrically responsive cell | 4.18e-12 | 61 |
electrically active cell | 4.18e-12 | 61 |
vascular associated smooth muscle cell | 4.78e-10 | 32 |