FFCP PHASE1:Hg19::chr13:73356205..73356221,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10464 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23352 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WXW3,F5H337,Q05DN0 | |||
|association_with_transcript=8bp_to_,-8bp_to_ENST00000326291,ENST00000538949,NM_006346,uc001vja.1,uc001vjb.2,uc001vjc.2,uc010aeo.1,uc010aep.2_5end | |||
|cluster_id=chr13:73356205..73356221,+ | |||
|description=CAGE_peak_3_at_PIBF1_5end | |||
|id=chr13:73356205..73356221,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.73e-10!18;CL:0000789!5.73e-10!18;CL:0002420!5.73e-10!18;CL:0002419!5.73e-10!18;CL:0000790!5.73e-10!18;CL:0000542!1.10e-08!53;CL:0000051!1.10e-08!53;CL:0000838!1.11e-08!52;CL:0000084!3.04e-08!25;CL:0000827!3.04e-08!25;CL:0000625!1.64e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.45e-12;18!CL:0000789;5.45e-12;18!CL:0002419;5.45e-12;18!CL:0000084;1.98e-10;25!CL:0000625;4.29e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.35e-12,18;CL:0000789,3.35e-12,18;CL:0002420,3.35e-12,18;CL:0002419,3.35e-12,18;CL:0000790,3.35e-12,18;CL:0000084,7.68e-11,25;CL:0000827,7.68e-11,25;CL:0000625,2.50e-09,11;CL:0000838,1.01e-08,52;CL:0000542,2.45e-08,53;CL:0000051,2.45e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;5.45e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-19!115;UBERON:0001049!6.55e-09!57;UBERON:0005068!6.55e-09!57;UBERON:0006241!6.55e-09!57;UBERON:0007135!6.55e-09!57;UBERON:0002780!7.78e-09!41;UBERON:0001890!7.78e-09!41;UBERON:0006240!7.78e-09!41;UBERON:0003080!3.91e-08!42;UBERON:0000073!1.37e-07!94;UBERON:0001016!1.37e-07!94;UBERON:0002020!6.00e-07!34;UBERON:0003528!6.00e-07!34;UBERON:0001017!6.52e-07!82;UBERON:0005743!7.92e-07!86;UBERON:0002616!8.17e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.34e-18,114;UBERON:0001049,2.30e-09,56;UBERON:0005068,2.30e-09,56;UBERON:0006241,2.30e-09,56;UBERON:0007135,2.30e-09,56;UBERON:0002780,5.09e-09,41;UBERON:0001890,5.09e-09,41;UBERON:0003080,5.09e-09,41;UBERON:0006240,5.09e-09,41;UBERON:0000073,9.00e-09,53;UBERON:0002616,9.00e-09,53;UBERON:0002346,7.18e-08,86;UBERON:0001016,1.38e-07,89;UBERON:0003528,2.65e-07,34;UBERON:0002020,2.65e-07,34;UBERON:0003075,2.67e-07,82;UBERON:0007284,2.67e-07,82;UBERON:0001017,8.71e-07,81 | |||
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| |||
|short_description=p3@PIBF1 | |||
}} |
Latest revision as of 22:21, 17 September 2015
Short description: | p3@PIBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PIBF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_, -8bp_to_ENST00000326291, ENST00000538949, NM_006346, uc001vja.1, uc001vjb.2, uc001vjc.2, uc010aeo.1, uc010aep.2_5end |
EntrezGene: | PIBF1 |
HGNC: | 23352 |
UniProt: | Q8WXW3F5H337Q05DN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.35e-12 | 18 |
alpha-beta T cell | 3.35e-12 | 18 |
immature T cell | 3.35e-12 | 18 |
mature T cell | 3.35e-12 | 18 |
immature alpha-beta T cell | 3.35e-12 | 18 |
T cell | 7.68e-11 | 25 |
pro-T cell | 7.68e-11 | 25 |
CD8-positive, alpha-beta T cell | 2.50e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.01e-08 | 52 |
lymphocyte | 2.45e-08 | 53 |
common lymphoid progenitor | 2.45e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.34e-18 | 114 |
neural tube | 2.30e-09 | 56 |
neural rod | 2.30e-09 | 56 |
future spinal cord | 2.30e-09 | 56 |
neural keel | 2.30e-09 | 56 |
regional part of forebrain | 5.09e-09 | 41 |
forebrain | 5.09e-09 | 41 |
anterior neural tube | 5.09e-09 | 41 |
future forebrain | 5.09e-09 | 41 |
regional part of nervous system | 9.00e-09 | 53 |
regional part of brain | 9.00e-09 | 53 |
neurectoderm | 7.18e-08 | 86 |
nervous system | 1.38e-07 | 89 |
brain grey matter | 2.65e-07 | 34 |
gray matter | 2.65e-07 | 34 |
neural plate | 2.67e-07 | 82 |
presumptive neural plate | 2.67e-07 | 82 |
central nervous system | 8.71e-07 | 81 |