FFCP PHASE1:Hg19::chr11:3849289..3849351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=391 | |EntrezGene=391 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=672 | |HGNC=672 | ||
|TSSclassifier=strong | |||
|UniProt=P84095,Q6ICQ8 | |UniProt=P84095,Q6ICQ8 | ||
|association_with_transcript=16bp_to_AB464684,AF498974,AY563952,BT019872,CR450335,CR542105,L11317_5end | |association_with_transcript=16bp_to_AB464684,AF498974,AY563952,BT019872,CR450335,CR542105,L11317_5end | ||
|cluster_id=chr11:3849289..3849351,- | |||
|description=CAGE_peak_4_at_RHOG_5end | |description=CAGE_peak_4_at_RHOG_5end | ||
|id=chr11:3849289..3849351,- | |id=chr11:3849289..3849351,- | ||
|ontology_enrichment_celltype=CL:0000763!3.94e-26!112;CL:0000049!3.94e-26!112;CL:0000766!1.60e-25!76;CL:0002057!1.76e-23!42;CL:0000860!2.03e-22!45;CL:0002009!4.10e-21!65;CL:0002194!4.13e-21!63;CL:0000576!4.13e-21!63;CL:0000040!4.13e-21!63;CL:0000559!4.13e-21!63;CL:0000839!4.21e-21!70;CL:0000557!6.57e-21!71;CL:0002032!6.59e-21!165;CL:0000837!6.59e-21!165;CL:0000037!7.19e-21!172;CL:0000566!7.19e-21!172;CL:0000988!4.68e-20!182;CL:0000738!1.03e-18!140;CL:0002031!2.60e-15!124;CL:0002087!3.19e-15!119;CL:0000134!1.64e-13!358;CL:0002320!2.39e-13!365;CL:0000048!5.69e-13!430;CL:0000723!4.10e-12!436;CL:0000034!1.91e-11!444;CL:0000219!3.89e-09!390 | |ontology_enrichment_celltype=CL:0000763!3.94e-26!112;CL:0000049!3.94e-26!112;CL:0000766!1.60e-25!76;CL:0002057!1.76e-23!42;CL:0000860!2.03e-22!45;CL:0002009!4.10e-21!65;CL:0002194!4.13e-21!63;CL:0000576!4.13e-21!63;CL:0000040!4.13e-21!63;CL:0000559!4.13e-21!63;CL:0000839!4.21e-21!70;CL:0000557!6.57e-21!71;CL:0002032!6.59e-21!165;CL:0000837!6.59e-21!165;CL:0000037!7.19e-21!172;CL:0000566!7.19e-21!172;CL:0000988!4.68e-20!182;CL:0000738!1.03e-18!140;CL:0002031!2.60e-15!124;CL:0002087!3.19e-15!119;CL:0000134!1.64e-13!358;CL:0002320!2.39e-13!365;CL:0000048!5.69e-13!430;CL:0000723!4.10e-12!436;CL:0000034!1.91e-11!444;CL:0000219!3.89e-09!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.15e-23;33!CL:0002057;3.15e-23;33!CL:0000473;1.02e-20;39!CL:0000234;1.02e-20;39!CL:0000576;3.68e-18;48!CL:0000766;4.03e-16;69!CL:0000763;8.70e-11;100!CL:0002087;7.99e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;3.15e-23;33!CL:0002057;3.15e-23;33!CL:0000473;1.02e-20;39!CL:0000234;1.02e-20;39!CL:0000576;3.68e-18;48!CL:0000766;4.03e-16;69!CL:0000763;8.70e-11;100!CL:0002087;7.99e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.69e-32,72;CL:0000763,2.64e-31,108;CL:0000049,2.64e-31,108;CL:0000473,7.90e-31,48;CL:0000234,7.90e-31,48;CL:0000860,3.54e-29,42;CL:0002057,3.54e-29,42;CL:0000557,2.30e-26,67;CL:0002194,3.22e-26,59;CL:0000576,3.22e-26,59;CL:0000040,3.22e-26,59;CL:0000559,3.22e-26,59;CL:0000839,4.75e-26,66;CL:0002009,1.11e-25,61;CL:0000037,3.43e-24,168;CL:0002032,5.86e-24,161;CL:0000837,5.86e-24,161;CL:0000988,2.49e-22,177;CL:0000738,3.36e-22,136;CL:0002087,1.40e-17,115;CL:0002031,2.30e-17,120;CL:0000134,1.88e-13,354;CL:0002320,1.46e-12,361;CL:0000048,2.84e-12,427;CL:0000723,1.45e-11,433;CL:0000034,1.37e-10,441;CL:0000219,4.47e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-21;42!CL:0000049;5.26e-10;108 | |ontology_enrichment_development_v019=CL:0002057;2.98e-21;42!CL:0000049;5.26e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-23!102;UBERON:0003061!1.15e-23!102;UBERON:0002193!2.78e-22!112;UBERON:0002371!1.86e-20!80;UBERON:0001474!1.59e-17!86;UBERON:0003081!5.56e-17!216;UBERON:0002405!8.33e-16!115;UBERON:0004765!2.83e-15!101;UBERON:0001434!2.83e-15!101;UBERON:0002384!1.10e-12!375;UBERON:0002204!1.85e-12!167;UBERON:0001737!6.59e-07!9 | |ontology_enrichment_uberon=UBERON:0002390!1.15e-23!102;UBERON:0003061!1.15e-23!102;UBERON:0002193!2.78e-22!112;UBERON:0002371!1.86e-20!80;UBERON:0001474!1.59e-17!86;UBERON:0003081!5.56e-17!216;UBERON:0002405!8.33e-16!115;UBERON:0004765!2.83e-15!101;UBERON:0001434!2.83e-15!101;UBERON:0002384!1.10e-12!375;UBERON:0002204!1.85e-12!167;UBERON:0001737!6.59e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.34e-08;9!UBERON:0001557;2.34e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.34e-08;9!UBERON:0001557;2.34e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.29e-27,98;UBERON:0003061,4.29e-27,98;UBERON:0002193,1.63e-25,108;UBERON:0002371,8.73e-25,76;UBERON:0001474,4.41e-22,82;UBERON:0002405,7.58e-22,93;UBERON:0003081,7.79e-21,203;UBERON:0004765,5.94e-20,90;UBERON:0001434,9.51e-19,100;UBERON:0000926,3.52e-15,315;UBERON:0004120,3.52e-15,315;UBERON:0006603,3.52e-15,315;UBERON:0002204,1.24e-14,167;UBERON:0002384,8.82e-12,371;UBERON:0001737,2.68e-08,9 | |||
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| ||
|short_description=p4@RHOG | |short_description=p4@RHOG | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p4@RHOG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RHOG_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_AB464684, AF498974, AY563952, BT019872, CR450335, CR542105, L11317_5end |
EntrezGene: | RHOG |
HGNC: | 672 |
UniProt: | P84095Q6ICQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.69e-32 | 72 |
myeloid cell | 2.64e-31 | 108 |
common myeloid progenitor | 2.64e-31 | 108 |
defensive cell | 7.90e-31 | 48 |
phagocyte | 7.90e-31 | 48 |
classical monocyte | 3.54e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.54e-29 | 42 |
granulocyte monocyte progenitor cell | 2.30e-26 | 67 |
monopoietic cell | 3.22e-26 | 59 |
monocyte | 3.22e-26 | 59 |
monoblast | 3.22e-26 | 59 |
promonocyte | 3.22e-26 | 59 |
myeloid lineage restricted progenitor cell | 4.75e-26 | 66 |
macrophage dendritic cell progenitor | 1.11e-25 | 61 |
hematopoietic stem cell | 3.43e-24 | 168 |
hematopoietic oligopotent progenitor cell | 5.86e-24 | 161 |
hematopoietic multipotent progenitor cell | 5.86e-24 | 161 |
hematopoietic cell | 2.49e-22 | 177 |
leukocyte | 3.36e-22 | 136 |
nongranular leukocyte | 1.40e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 2.30e-17 | 120 |
mesenchymal cell | 1.88e-13 | 354 |
connective tissue cell | 1.46e-12 | 361 |
multi fate stem cell | 2.84e-12 | 427 |
somatic stem cell | 1.45e-11 | 433 |
stem cell | 1.37e-10 | 441 |
motile cell | 4.47e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.29e-27 | 98 |
blood island | 4.29e-27 | 98 |
hemolymphoid system | 1.63e-25 | 108 |
bone marrow | 8.73e-25 | 76 |
bone element | 4.41e-22 | 82 |
immune system | 7.58e-22 | 93 |
lateral plate mesoderm | 7.79e-21 | 203 |
skeletal element | 5.94e-20 | 90 |
skeletal system | 9.51e-19 | 100 |
mesoderm | 3.52e-15 | 315 |
mesoderm-derived structure | 3.52e-15 | 315 |
presumptive mesoderm | 3.52e-15 | 315 |
musculoskeletal system | 1.24e-14 | 167 |
connective tissue | 8.82e-12 | 371 |
larynx | 2.68e-08 | 9 |