FFCP PHASE1:Hg19::chr5:40841560..40841576,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:40841560..40841576,+ to FFCP PHASE1:Hg19::chr5:40841560..40841576,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84674 | |EntrezGene=84674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16394 | |HGNC=16394 | ||
|TSSclassifier=strong | |||
|UniProt=Q59EG7 | |UniProt=Q59EG7 | ||
|association_with_transcript=-13bp_to_AB209844_5end | |||
|cluster_id=chr5:40841560..40841576,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_CARD6_5end | |||
|id=chr5:40841560..40841576,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.26e-08!24;CL:0000839!6.36e-07!70;CL:0002194!8.40e-07!63;CL:0000576!8.40e-07!63;CL:0000040!8.40e-07!63;CL:0000559!8.40e-07!63;CL:0000860!8.70e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.10e-15;33!CL:0002057;8.10e-15;33!CL:0000473;8.05e-11;39!CL:0000234;8.05e-11;39!CL:0002595;1.68e-10;5!CL:0002139;2.19e-10;24!CL:0002544;7.89e-09;6!CL:0002138;7.89e-09;6!CL:0000576;2.11e-08;48!CL:0000115;2.39e-07;36!CL:0000222;7.77e-07;1!CL:0002591;7.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.57e-12,42;CL:0002057,3.57e-12,42;CL:0002595,8.86e-11,5;CL:0002139,1.49e-10,24;CL:0000473,2.03e-10,48;CL:0000234,2.03e-10,48;CL:0002544,5.48e-09,6;CL:0005020,5.48e-09,6;CL:0002138,5.48e-09,6;CL:0005022,5.48e-09,6;CL:0000115,9.44e-09,36;CL:0002194,5.69e-08,59;CL:0000576,5.69e-08,59;CL:0000040,5.69e-08,59;CL:0000559,5.69e-08,59;CL:0002009,1.18e-07,61;CL:0000839,5.95e-07,66;CL:0000557,8.00e-07,67;CL:0002078,9.10e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-09;42!CL:0005022;7.89e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.49e-15!115;UBERON:0001049!4.98e-11!57;UBERON:0005068!4.98e-11!57;UBERON:0006241!4.98e-11!57;UBERON:0007135!4.98e-11!57;UBERON:0002616!5.51e-10!59;UBERON:0000955!3.70e-09!69;UBERON:0006238!3.70e-09!69;UBERON:0001017!1.29e-08!82;UBERON:0002193!1.75e-08!112;UBERON:0000055!3.01e-08!69;UBERON:0000477!3.19e-08!286;UBERON:0000025!3.26e-08!194;UBERON:0005743!4.18e-08!86;UBERON:0004111!5.18e-08!241;UBERON:0002405!7.06e-08!115;UBERON:0003080!1.05e-07!42;UBERON:0002371!3.51e-07!80;UBERON:0002780!3.54e-07!41;UBERON:0001890!3.54e-07!41;UBERON:0006240!3.54e-07!41;UBERON:0003075!6.28e-07!86;UBERON:0007284!6.28e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;8.29e-13;7!UBERON:0003834;1.68e-10;5!UBERON:0001533;1.68e-10;5!UBERON:0004573;1.01e-07;33!UBERON:0004571;1.01e-07;33!UBERON:0002135;7.77e-07;1!UBERON:0000055;8.68e-07;65!UBERON:0001473;9.91e-07;8!UBERON:0004536;9.91e-07;8!UBERON:0006558;9.91e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,3.93e-13,7;UBERON:0000055,4.44e-13,68;UBERON:0002049,4.88e-11,78;UBERON:0007798,4.88e-11,78;UBERON:0003834,8.86e-11,5;UBERON:0001533,8.86e-11,5;UBERON:0007500,2.72e-09,59;UBERON:0001981,2.72e-09,59;UBERON:0004537,2.72e-09,59;UBERON:0006965,2.72e-09,59;UBERON:0003081,9.52e-09,203;UBERON:0004535,2.71e-08,109;UBERON:0001009,5.43e-08,112;UBERON:0002405,8.85e-08,93;UBERON:0004573,1.76e-07,33;UBERON:0004571,1.76e-07,33;UBERON:0001637,2.49e-07,42;UBERON:0003509,2.49e-07,42;UBERON:0004572,2.49e-07,42;UBERON:0004872,2.97e-07,83;UBERON:0001473,7.57e-07,8;UBERON:0004536,7.57e-07,8;UBERON:0006558,7.57e-07,8 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0.436194716338694,0,0.485168122375632,0.232429036905685,0.411167888021826,1.23882548358041,2.3015391385772,3.07392847834921,3.78371567821736,0.344745680736619,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0.641858054152187,0,2.63881040149373,6.58230070151385,2.55734850319616,0.580418477257168,0,0.622822248995575,4.27122730936464,5.21482918420201,3.9093992046921,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0.579606171470105,0,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0,0.953962497221368,0,1.11437250398869,1.19257444420023,0,0,1.69592382577203,0.838998872419812,0.550236083880135,0.626984899610432,0.258416759169329,1.06729878806013,0,1.20848795132744,0,0.24406205754817,1.47065232138347,0.81014194788176,0.625098097988558,0,0.337834441449967,0,0.949265659568129,0,0,0,0,0.496971951695318,0.379891534993739,0,0,0,0.560677600142307,0,0,0.933633106199299,0.538842688278752,1.14423332179421,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.110293972732394,0.871517776369625,0,0.269662616320329,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,1.87676382089396,0.462985512576611,1.90254152234598,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0.924100740528266,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,1.26377536871694,0,1.46228093778771,0,0,0,1.13008116620243,0,1.32687795048244,1.75380354101505,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.284567373393656,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0.321176150207399,0,0,0,0,0.447352215784832,0.166849141711909,0,0.556812347790485,0,0.811367035427949,0,0,0,0.879049075631364,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0,0,0.306806047506464,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,3.05163472634166,0.221158519862449,0.295547618953547,0.438770794307945,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0.166211681900156,0,0,0,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0.429765441419957,0,1.11712960508902,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.419636705079985,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.339936274560377,0.146552233678082,0,0.904980694530854,0.26446520348538,0.342173675768659,0.704815022316672,1.17466153824464,1.10043013569766,0.414239055347196,0,0.592834895693833,0,0,0,1.0027595760908,0.306345576763462,0.327872630709804,0,0.886068179966986,0.732157589411779,0.1251909307065,1.14681839138014,0.221858103073705,0.496771223531068,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.378806010550178,0.251567901752575,0,0,0,0,0.591420599958536,0,0.899606224327209,0.310525913752519,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0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| ||
|short_description=p6@CARD6 | |||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p6@CARD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CARD6_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -13bp_to_AB209844_5end |
EntrezGene: | CARD6 |
HGNC: | 16394 |
UniProt: | Q59EG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.57e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-12 | 42 |
smooth muscle cell of the subclavian artery | 8.86e-11 | 5 |
endothelial cell of vascular tree | 1.49e-10 | 24 |
defensive cell | 2.03e-10 | 48 |
phagocyte | 2.03e-10 | 48 |
aortic endothelial cell | 5.48e-09 | 6 |
lymphangioblast | 5.48e-09 | 6 |
endothelial cell of lymphatic vessel | 5.48e-09 | 6 |
vascular lymphangioblast | 5.48e-09 | 6 |
endothelial cell | 9.44e-09 | 36 |
monopoietic cell | 5.69e-08 | 59 |
monocyte | 5.69e-08 | 59 |
monoblast | 5.69e-08 | 59 |
promonocyte | 5.69e-08 | 59 |
macrophage dendritic cell progenitor | 1.18e-07 | 61 |
myeloid lineage restricted progenitor cell | 5.95e-07 | 66 |
granulocyte monocyte progenitor cell | 8.00e-07 | 67 |
meso-epithelial cell | 9.10e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 3.93e-13 | 7 |
vessel | 4.44e-13 | 68 |
vasculature | 4.88e-11 | 78 |
vascular system | 4.88e-11 | 78 |
thoracic segment blood vessel | 8.86e-11 | 5 |
subclavian artery | 8.86e-11 | 5 |
epithelial tube open at both ends | 2.72e-09 | 59 |
blood vessel | 2.72e-09 | 59 |
blood vasculature | 2.72e-09 | 59 |
vascular cord | 2.72e-09 | 59 |
lateral plate mesoderm | 9.52e-09 | 203 |
cardiovascular system | 2.71e-08 | 109 |
circulatory system | 5.43e-08 | 112 |
immune system | 8.85e-08 | 93 |
systemic artery | 1.76e-07 | 33 |
systemic arterial system | 1.76e-07 | 33 |
artery | 2.49e-07 | 42 |
arterial blood vessel | 2.49e-07 | 42 |
arterial system | 2.49e-07 | 42 |
splanchnic layer of lateral plate mesoderm | 2.97e-07 | 83 |
lymphatic vessel | 7.57e-07 | 8 |
lymph vasculature | 7.57e-07 | 8 |
lymphatic part of lymphoid system | 7.57e-07 | 8 |