FFCP PHASE1:Hg19::chr11:3837418..3837454,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27315 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17893 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000529944_5end | |||
|cluster_id=chr11:3837418..3837454,+ | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_3_at_PGAP2_5end | |||
|id=chr11:3837418..3837454,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.67e-26;2!UBERON:0005754;3.98e-14;1 | |||
|ontology_enrichment_disease=DOID:1287!1.72e-09!4;DOID:114!2.62e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.50e-07;2!DOID:4468;1.99e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.54e-07,2;DOID:4468,2.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.46e-26!9;UBERON:0006947!9.41e-14!3;UBERON:0004054!9.41e-14!3;UBERON:0003978!1.12e-12!3;UBERON:0009751!1.12e-12!3;UBERON:0000946!1.12e-12!3;UBERON:0002523!1.12e-12!3;UBERON:0005983!1.12e-12!3;UBERON:0002165!1.12e-12!3;UBERON:0002062!1.12e-12!3;UBERON:0007280!1.12e-12!3;UBERON:0001557!1.01e-11!19;UBERON:0005904!2.05e-10!4;UBERON:0008947!2.54e-10!38;UBERON:0003258!2.54e-10!38;UBERON:0003135!1.56e-09!11;UBERON:0002133!6.59e-09!2;UBERON:0003101!1.95e-08!22;UBERON:0000079!1.95e-08!22;UBERON:0003103!2.39e-08!69;UBERON:0001048!1.38e-07!168;UBERON:0007023!3.40e-07!115;UBERON:0000065!8.69e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.65e-39;3!UBERON:0004054;6.65e-39;3!UBERON:0005904;2.25e-29;4!UBERON:0003135;1.42e-28;11!UBERON:0003101;2.67e-20;22!UBERON:0000079;2.67e-20;22!UBERON:0000473;1.19e-14;8!UBERON:0001000;3.08e-14;1!UBERON:0005352;3.08e-14;1!UBERON:0001301;3.50e-14;1!UBERON:0000998;3.98e-14;1!UBERON:0006868;3.98e-14;1!UBERON:0002171;5.15e-14;1!UBERON:0006518;5.15e-14;1!UBERON:0008949;5.15e-14;1!UBERON:0000101;5.15e-14;1!UBERON:0002167;5.15e-14;1!UBERON:0002146;1.42e-13;1!UBERON:0005623;1.42e-13;1!UBERON:0000058;3.85e-12;10!UBERON:0004175;5.27e-10;21!UBERON:0003133;4.86e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.65e-39,3;UBERON:0004054,6.65e-39,3;UBERON:0005904,2.25e-29,4;UBERON:0003135,1.55e-28,11;UBERON:0003101,2.81e-20,22;UBERON:0000079,2.81e-20,22;UBERON:0000473,1.28e-14,8;UBERON:0001000,3.08e-14,1;UBERON:0005352,3.08e-14,1;UBERON:0001301,3.50e-14,1;UBERON:0000998,3.98e-14,1;UBERON:0006868,3.98e-14,1;UBERON:0002171,5.15e-14,1;UBERON:0006518,5.15e-14,1;UBERON:0008949,5.15e-14,1;UBERON:0000101,5.15e-14,1;UBERON:0002167,5.15e-14,1;UBERON:0002146,2.07e-13,1;UBERON:0005623,2.07e-13,1;UBERON:0007023,6.76e-12,114;UBERON:0005156,6.80e-10,59;UBERON:0000990,6.80e-10,59;UBERON:0003133,3.88e-09,48;UBERON:0004175,1.96e-08,25 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.330881918197182,0.217879444092406,0.237270619111097,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0,0,0.616122696835318,0,0,0,0,0,0,0,0,0,1.52925763827023,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,142.050385025781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,9.89290508510246,0,0,127.201014480198,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,1.14580212005842,0.717873024576814,0.798716001995964,2.14613024068285,1.56220020209311,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,3.73755943986931,1.88645166119599,8.69902016229111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12246124234009,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,74.5161208336035,0.68732060563215,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PGAP2 | |||
}} |
Latest revision as of 22:14, 17 September 2015
Short description: | p3@PGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PGAP2_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 0bp_to_ENST00000529944_5end |
EntrezGene: | PGAP2 |
HGNC: | 17893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.65e-39 | 3 |
internal male genitalia | 6.65e-39 | 3 |
duct of male reproductive system | 2.25e-29 | 4 |
male reproductive organ | 1.55e-28 | 11 |
male organism | 2.81e-20 | 22 |
male reproductive system | 2.81e-20 | 22 |
testis | 1.28e-14 | 8 |
vas deferens | 3.08e-14 | 1 |
spermatic cord | 3.08e-14 | 1 |
epididymis | 3.50e-14 | 1 |
seminal vesicle | 3.98e-14 | 1 |
seminal fluid secreting gland | 3.98e-14 | 1 |
lower lobe of right lung | 5.15e-14 | 1 |
right lung lobe | 5.15e-14 | 1 |
lower lobe of lung | 5.15e-14 | 1 |
lobe of lung | 5.15e-14 | 1 |
right lung | 5.15e-14 | 1 |
pulmonary valve | 2.07e-13 | 1 |
semi-lunar valve | 2.07e-13 | 1 |
adult organism | 6.76e-12 | 114 |
reproductive structure | 6.80e-10 | 59 |
reproductive system | 6.80e-10 | 59 |
reproductive organ | 3.88e-09 | 48 |
internal genitalia | 1.96e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.54e-07 | 2 |
clear cell adenocarcinoma | 2.12e-07 | 2 |