FFCP PHASE1:Hg19::chr6:31582990..31583096,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=199 | |EntrezGene=199 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=352 | |HGNC=352 | ||
|TSSclassifier=strong | |||
|UniProt=P55008,Q4V347,O43904 | |UniProt=P55008,Q4V347,O43904 | ||
|association_with_transcript=0bp_to_ENST00000337917,ENST00000466820,ENST00000497362,NM_001623,NM_004847,uc003nuy.2,uc010jsy.2_5end | |association_with_transcript=0bp_to_ENST00000337917,ENST00000466820,ENST00000497362,NM_001623,NM_004847,uc003nuy.2,uc010jsy.2_5end | ||
|cluster_id=chr6:31582990..31583096,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_1_at_AIF1_5end | |description=CAGE_peak_1_at_AIF1_5end | ||
|id=chr6:31582990..31583096,+ | |id=chr6:31582990..31583096,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.68e-58!172;CL:0000566!4.68e-58!172;CL:0000763!7.09e-55!112;CL:0000049!7.09e-55!112;CL:0002032!7.46e-54!165;CL:0000837!7.46e-54!165;CL:0000988!2.04e-51!182;CL:0000738!1.19e-46!140;CL:0000766!3.33e-44!76;CL:0000557!3.71e-39!71;CL:0002009!7.93e-39!65;CL:0000839!1.40e-37!70;CL:0002194!1.86e-37!63;CL:0000576!1.86e-37!63;CL:0000040!1.86e-37!63;CL:0000559!1.86e-37!63;CL:0002031!1.64e-36!124;CL:0002087!2.53e-36!119;CL:0002057!1.03e-33!42;CL:0000860!6.62e-30!45;CL:0002393!6.03e-09!9;CL:0002397!6.03e-09!9;CL:0000094!9.41e-08!8;CL:0000134!1.29e-07!358;CL:0002320!9.44e-07!365 | |ontology_enrichment_celltype=CL:0000037!4.68e-58!172;CL:0000566!4.68e-58!172;CL:0000763!7.09e-55!112;CL:0000049!7.09e-55!112;CL:0002032!7.46e-54!165;CL:0000837!7.46e-54!165;CL:0000988!2.04e-51!182;CL:0000738!1.19e-46!140;CL:0000766!3.33e-44!76;CL:0000557!3.71e-39!71;CL:0002009!7.93e-39!65;CL:0000839!1.40e-37!70;CL:0002194!1.86e-37!63;CL:0000576!1.86e-37!63;CL:0000040!1.86e-37!63;CL:0000559!1.86e-37!63;CL:0002031!1.64e-36!124;CL:0002087!2.53e-36!119;CL:0002057!1.03e-33!42;CL:0000860!6.62e-30!45;CL:0002393!6.03e-09!9;CL:0002397!6.03e-09!9;CL:0000094!9.41e-08!8;CL:0000134!1.29e-07!358;CL:0002320!9.44e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000576;8.65e-26;48!CL:0000473;1.56e-25;39!CL:0000234;1.56e-25;39!CL:0000860;2.13e-25;33!CL:0002057;2.13e-25;33!CL:0000766;5.24e-22;69!CL:0000763;2.25e-18;100!CL:0002087;2.18e-10;104!CL:0000738;3.27e-10;136!CL:0000988;5.42e-09;177!CL:0000094;3.32e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.90e-62,108;CL:0000049,2.90e-62,108;CL:0000037,1.57e-56,168;CL:0002032,6.68e-53,161;CL:0000837,6.68e-53,161;CL:0000766,2.64e-52,72;CL:0000988,7.43e-51,177;CL:0000557,1.05e-46,67;CL:0002009,1.14e-46,61;CL:0000738,3.43e-45,136;CL:0002194,3.46e-45,59;CL:0000576,3.46e-45,59;CL:0000040,3.46e-45,59;CL:0000559,3.46e-45,59;CL:0000839,6.43e-45,66;CL:0000473,2.85e-41,48;CL:0000234,2.85e-41,48;CL:0000860,4.58e-36,42;CL:0002057,4.58e-36,42;CL:0002031,2.49e-35,120;CL:0002087,4.19e-35,115;CL:0002393,1.75e-09,9;CL:0002397,1.75e-09,9;CL:0000094,3.32e-08,8;CL:0000134,1.31e-07,354;CL:0002320,8.31e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.09e-26;42!CL:0000049;2.04e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!1.28e-10!31;DOID:1240!2.07e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.06e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.08e-10,31;DOID:1240,3.08e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.81e-43!115;UBERON:0002390!1.31e-40!102;UBERON:0003061!1.31e-40!102;UBERON:0002193!8.45e-36!112;UBERON:0002371!2.53e-33!80;UBERON:0001474!9.18e-29!86;UBERON:0002405!1.83e-25!115;UBERON:0004765!2.20e-21!101;UBERON:0001434!2.20e-21!101;UBERON:0001049!4.11e-15!57;UBERON:0005068!4.11e-15!57;UBERON:0006241!4.11e-15!57;UBERON:0007135!4.11e-15!57;UBERON:0003080!1.17e-12!42;UBERON:0002780!1.66e-12!41;UBERON:0001890!1.66e-12!41;UBERON:0006240!1.66e-12!41;UBERON:0002616!2.61e-11!59;UBERON:0001017!5.94e-11!82;UBERON:0005743!3.08e-10!86;UBERON:0001893!3.17e-10!34;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0002791!6.69e-10!33;UBERON:0003081!1.05e-09!216;UBERON:0000955!2.60e-09!69;UBERON:0006238!2.60e-09!69;UBERON:0001869!3.00e-09!32;UBERON:0000073!9.52e-09!94;UBERON:0001016!9.52e-09!94;UBERON:0002619!1.58e-08!22;UBERON:0000479!2.74e-08!787;UBERON:0003075!3.52e-08!86;UBERON:0007284!3.52e-08!86;UBERON:0001950!1.05e-07!20;UBERON:0002346!3.93e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!4.81e-43!115;UBERON:0002390!1.31e-40!102;UBERON:0003061!1.31e-40!102;UBERON:0002193!8.45e-36!112;UBERON:0002371!2.53e-33!80;UBERON:0001474!9.18e-29!86;UBERON:0002405!1.83e-25!115;UBERON:0004765!2.20e-21!101;UBERON:0001434!2.20e-21!101;UBERON:0001049!4.11e-15!57;UBERON:0005068!4.11e-15!57;UBERON:0006241!4.11e-15!57;UBERON:0007135!4.11e-15!57;UBERON:0003080!1.17e-12!42;UBERON:0002780!1.66e-12!41;UBERON:0001890!1.66e-12!41;UBERON:0006240!1.66e-12!41;UBERON:0002616!2.61e-11!59;UBERON:0001017!5.94e-11!82;UBERON:0005743!3.08e-10!86;UBERON:0001893!3.17e-10!34;UBERON:0002020!3.75e-10!34;UBERON:0003528!3.75e-10!34;UBERON:0002791!6.69e-10!33;UBERON:0003081!1.05e-09!216;UBERON:0000955!2.60e-09!69;UBERON:0006238!2.60e-09!69;UBERON:0001869!3.00e-09!32;UBERON:0000073!9.52e-09!94;UBERON:0001016!9.52e-09!94;UBERON:0002619!1.58e-08!22;UBERON:0000479!2.74e-08!787;UBERON:0003075!3.52e-08!86;UBERON:0007284!3.52e-08!86;UBERON:0001950!1.05e-07!20;UBERON:0002346!3.93e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.60e-12;114!UBERON:0002780;3.59e-10;41!UBERON:0001890;3.59e-10;41!UBERON:0001893;2.38e-09;34!UBERON:0003528;3.03e-09;34!UBERON:0002020;3.03e-09;34!UBERON:0002791;4.10e-09;32!UBERON:0000073;4.41e-09;53!UBERON:0002616;4.41e-09;53!UBERON:0002619;4.86e-09;22!UBERON:0001869;5.73e-09;32!UBERON:0001950;3.70e-08;20!UBERON:0000956;3.22e-07;25!UBERON:0000203;3.22e-07;25!UBERON:0000178;4.59e-07;15!UBERON:0000179;4.59e-07;15!UBERON:0000463;4.59e-07;15 | |||
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| ||
|short_description=p1@AIF1 | |short_description=p1@AIF1 | ||
}} | }} |
Latest revision as of 22:13, 17 September 2015
Short description: | p1@AIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIF1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000337917, ENST00000466820, ENST00000497362, NM_001623, NM_004847, uc003nuy.2, uc010jsy.2_5end |
EntrezGene: | AIF1 |
HGNC: | 352 |
UniProt: | P55008Q4V347O43904 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.90e-62 | 108 |
common myeloid progenitor | 2.90e-62 | 108 |
hematopoietic stem cell | 1.57e-56 | 168 |
hematopoietic oligopotent progenitor cell | 6.68e-53 | 161 |
hematopoietic multipotent progenitor cell | 6.68e-53 | 161 |
myeloid leukocyte | 2.64e-52 | 72 |
hematopoietic cell | 7.43e-51 | 177 |
granulocyte monocyte progenitor cell | 1.05e-46 | 67 |
macrophage dendritic cell progenitor | 1.14e-46 | 61 |
leukocyte | 3.43e-45 | 136 |
monopoietic cell | 3.46e-45 | 59 |
monocyte | 3.46e-45 | 59 |
monoblast | 3.46e-45 | 59 |
promonocyte | 3.46e-45 | 59 |
myeloid lineage restricted progenitor cell | 6.43e-45 | 66 |
defensive cell | 2.85e-41 | 48 |
phagocyte | 2.85e-41 | 48 |
classical monocyte | 4.58e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.58e-36 | 42 |
hematopoietic lineage restricted progenitor cell | 2.49e-35 | 120 |
nongranular leukocyte | 4.19e-35 | 115 |
intermediate monocyte | 1.75e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.75e-09 | 9 |
granulocyte | 3.32e-08 | 8 |
mesenchymal cell | 1.31e-07 | 354 |
connective tissue cell | 8.31e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.08e-10 | 31 |
leukemia | 3.08e-07 | 39 |