FFCP PHASE1:Hg19::chr6:31554992..31555041,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7940 | |EntrezGene=7940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |HGNC=14189 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460834_5end | |association_with_transcript=0bp_to_ENST00000460834_5end | ||
|cluster_id=chr6:31554992..31555041,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_2_at_LST1_5end | |description=CAGE_peak_2_at_LST1_5end | ||
|id=chr6:31554992..31555041,+ | |id=chr6:31554992..31555041,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.05e-54!172;CL:0000566!1.05e-54!172;CL:0000763!4.77e-53!112;CL:0000049!4.77e-53!112;CL:0002032!1.37e-50!165;CL:0000837!1.37e-50!165;CL:0000988!5.77e-49!182;CL:0000766!4.42e-47!76;CL:0000738!2.08e-46!140;CL:0002009!5.27e-46!65;CL:0002194!2.42e-44!63;CL:0000576!2.42e-44!63;CL:0000040!2.42e-44!63;CL:0000559!2.42e-44!63;CL:0000557!7.87e-41!71;CL:0000839!1.07e-40!70;CL:0002057!1.91e-40!42;CL:0002087!5.32e-40!119;CL:0002031!3.66e-38!124;CL:0000860!2.48e-36!45;CL:0002393!5.15e-10!9;CL:0002397!5.15e-10!9;CL:0000094!4.82e-08!8;CL:0000134!2.02e-07!358 | |ontology_enrichment_celltype=CL:0000037!1.05e-54!172;CL:0000566!1.05e-54!172;CL:0000763!4.77e-53!112;CL:0000049!4.77e-53!112;CL:0002032!1.37e-50!165;CL:0000837!1.37e-50!165;CL:0000988!5.77e-49!182;CL:0000766!4.42e-47!76;CL:0000738!2.08e-46!140;CL:0002009!5.27e-46!65;CL:0002194!2.42e-44!63;CL:0000576!2.42e-44!63;CL:0000040!2.42e-44!63;CL:0000559!2.42e-44!63;CL:0000557!7.87e-41!71;CL:0000839!1.07e-40!70;CL:0002057!1.91e-40!42;CL:0002087!5.32e-40!119;CL:0002031!3.66e-38!124;CL:0000860!2.48e-36!45;CL:0002393!5.15e-10!9;CL:0002397!5.15e-10!9;CL:0000094!4.82e-08!8;CL:0000134!2.02e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.02e-37;33!CL:0002057;8.02e-37;33!CL:0000473;7.12e-36;39!CL:0000234;7.12e-36;39!CL:0000576;1.74e-35;48!CL:0000766;3.77e-27;69!CL:0000763;2.42e-19;100!CL:0000738;2.63e-12;136!CL:0002087;4.24e-12;104!CL:0000094;6.38e-10;8!CL:0000988;2.44e-09;177!CL:0002393;1.30e-08;6!CL:0002397;1.30e-08;6!CL:0000235;1.67e-07;6!CL:0000840;8.11e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.89e-66,72;CL:0002009,9.54e-66,61;CL:0002194,1.41e-63,59;CL:0000576,1.41e-63,59;CL:0000040,1.41e-63,59;CL:0000559,1.41e-63,59;CL:0000763,1.45e-62,108;CL:0000049,1.45e-62,108;CL:0000473,4.37e-58,48;CL:0000234,4.37e-58,48;CL:0000557,9.12e-58,67;CL:0000037,6.66e-55,168;CL:0000839,1.95e-54,66;CL:0000860,8.06e-52,42;CL:0002057,8.06e-52,42;CL:0000988,2.81e-50,177;CL:0000738,3.24e-50,136;CL:0002032,7.19e-50,161;CL:0000837,7.19e-50,161;CL:0002087,3.65e-44,115;CL:0002031,1.28e-39,120;CL:0002393,1.82e-12,9;CL:0002397,1.82e-12,9;CL:0000134,6.05e-10,354;CL:0000094,6.31e-10,8;CL:0002320,3.13e-09,361;CL:0000235,1.69e-07,6;CL:0000219,7.94e-07,386;CL:0000840,8.64e-07,5;CL:0001029,8.64e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.90e-37;42!CL:0000049;9.20e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!2.42e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.27e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.76e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-42!102;UBERON:0003061!1.28e-42!102;UBERON:0002193!4.39e-39!112;UBERON:0002371!1.19e-34!80;UBERON:0007023!3.70e-34!115;UBERON:0001474!2.35e-30!86;UBERON:0002405!4.66e-26!115;UBERON:0004765!7.10e-23!101;UBERON:0001434!7.10e-23!101;UBERON:0001049!1.24e-15!57;UBERON:0005068!1.24e-15!57;UBERON:0006241!1.24e-15!57;UBERON:0007135!1.24e-15!57;UBERON:0003080!5.62e-12!42;UBERON:0002616!8.91e-12!59;UBERON:0002780!1.13e-11!41;UBERON:0001890!1.13e-11!41;UBERON:0006240!1.13e-11!41;UBERON:0001893!9.70e-10!34;UBERON:0002020!9.80e-10!34;UBERON:0003528!9.80e-10!34;UBERON:0003081!1.12e-09!216;UBERON:0002791!2.13e-09!33;UBERON:0001017!2.29e-09!82;UBERON:0000955!2.98e-09!69;UBERON:0006238!2.98e-09!69;UBERON:0005743!8.31e-09!86;UBERON:0001869!1.05e-08!32;UBERON:0003075!2.69e-08!86;UBERON:0007284!2.69e-08!86;UBERON:0002204!6.95e-08!167;UBERON:0000178!1.31e-07!15;UBERON:0000179!1.31e-07!15;UBERON:0000463!1.31e-07!15;UBERON:0002346!2.35e-07!90;UBERON:0002619!2.65e-07!22;UBERON:0000073!9.35e-07!94;UBERON:0001016!9.35e-07!94 | |ontology_enrichment_uberon=UBERON:0002390!1.28e-42!102;UBERON:0003061!1.28e-42!102;UBERON:0002193!4.39e-39!112;UBERON:0002371!1.19e-34!80;UBERON:0007023!3.70e-34!115;UBERON:0001474!2.35e-30!86;UBERON:0002405!4.66e-26!115;UBERON:0004765!7.10e-23!101;UBERON:0001434!7.10e-23!101;UBERON:0001049!1.24e-15!57;UBERON:0005068!1.24e-15!57;UBERON:0006241!1.24e-15!57;UBERON:0007135!1.24e-15!57;UBERON:0003080!5.62e-12!42;UBERON:0002616!8.91e-12!59;UBERON:0002780!1.13e-11!41;UBERON:0001890!1.13e-11!41;UBERON:0006240!1.13e-11!41;UBERON:0001893!9.70e-10!34;UBERON:0002020!9.80e-10!34;UBERON:0003528!9.80e-10!34;UBERON:0003081!1.12e-09!216;UBERON:0002791!2.13e-09!33;UBERON:0001017!2.29e-09!82;UBERON:0000955!2.98e-09!69;UBERON:0006238!2.98e-09!69;UBERON:0005743!8.31e-09!86;UBERON:0001869!1.05e-08!32;UBERON:0003075!2.69e-08!86;UBERON:0007284!2.69e-08!86;UBERON:0002204!6.95e-08!167;UBERON:0000178!1.31e-07!15;UBERON:0000179!1.31e-07!15;UBERON:0000463!1.31e-07!15;UBERON:0002346!2.35e-07!90;UBERON:0002619!2.65e-07!22;UBERON:0000073!9.35e-07!94;UBERON:0001016!9.35e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.65e-10;15!UBERON:0000179;7.65e-10;15!UBERON:0000463;7.65e-10;15!UBERON:0002780;2.57e-08;41!UBERON:0001890;2.57e-08;41!UBERON:0001893;4.69e-08;34!UBERON:0002791;9.46e-08;32!UBERON:0003528;1.02e-07;34!UBERON:0002020;1.02e-07;34!UBERON:0001869;1.96e-07;32!UBERON:0000073;2.53e-07;53!UBERON:0002616;2.53e-07;53!UBERON:0000125;4.07e-07;9!UBERON:0002308;4.07e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-58,98;UBERON:0003061,1.09e-58,98;UBERON:0002193,1.12e-53,108;UBERON:0002371,4.42e-50,76;UBERON:0001474,1.04e-44,82;UBERON:0002405,4.54e-44,93;UBERON:0004765,1.11e-38,90;UBERON:0001434,1.29e-33,100;UBERON:0007023,7.27e-19,114;UBERON:0003081,8.29e-18,203;UBERON:0001049,1.02e-13,56;UBERON:0005068,1.02e-13,56;UBERON:0006241,1.02e-13,56;UBERON:0007135,1.02e-13,56;UBERON:0002204,6.93e-13,167;UBERON:0000073,5.86e-12,53;UBERON:0002616,5.86e-12,53;UBERON:0002780,2.03e-10,41;UBERON:0001890,2.03e-10,41;UBERON:0003080,2.03e-10,41;UBERON:0006240,2.03e-10,41;UBERON:0000178,7.66e-10,15;UBERON:0000179,7.66e-10,15;UBERON:0000463,7.66e-10,15;UBERON:0001893,1.65e-09,34;UBERON:0003528,1.67e-09,34;UBERON:0002020,1.67e-09,34;UBERON:0002384,1.25e-08,371;UBERON:0002791,1.70e-08,32;UBERON:0001869,2.73e-08,32;UBERON:0001017,3.73e-08,81;UBERON:0000955,7.48e-08,68;UBERON:0006238,7.48e-08,68;UBERON:0000125,3.29e-07,9;UBERON:0002308,3.29e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,169.146639045029,57.9582391126791,68.2739103823895,0,0,0,0.154934401160603,0,9.39521405871511,47.6436051337415,51.5399229998264,38.4109241167058,6.04571780447796,2.91504299417082,7.21211589375722,82.4408013880132,58.1928953280767,73.5029705399083,80.6528758062726,54.6853291069028,81.4527755454122,105.583107982229,78.1290154913757,128.882815289279,75.1545584005828,34.8561729135266,59.5876541015104,84.7090527941721,64.4058514136516,100.001950578063,94.273838850238,70.6043859567406,101.654603002048,88.4001484500399,73.8015533200038,79.2778035990811,100.122187326861,51.6320554468937,94.0461595983318,91.957011483968,77.1794719261898,124.666396860737,76.8857368344378,63.3437533898611,99.3691896564377,383.428344656174,431.374124629073,309.456160770363,101.769739818725,88.4541898836472,58.6648391444342,912.610805459478,858.524378791273,618.86615295458,0,1.09227722252426,0.889509253863555,5.12076267079809,2.00197993518006,4.59801951963587,2.64417949113945,0,1.1384259382189,4.11066032559657,0.764546456250458,2.64342657158052,5.04457706683382,8.42829071280246,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0.334231370655521,0,0.221533894583621,0,0.128091319725675,0.390178042679635,0.493313713811028,0.552700035571697,0.289803085735052,0,0,0,0.339928028092699,0,0,0,1.91139248594458,0.651083453856419,0,3.91495309602209,1.02389288923535,3.74792179657038,6.86654030927649,4.92676798152628,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.5062593682237,0,0,5.19275829847493,6.09454080547435,11.1684686835847,5.00830311041218,13.1558829479429,5.94332002127304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9916918359339,50.4114343392823,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,18.2200584504674,13.3382431129365,22.5919366678867,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,39.1760531317059,29.5167515276244,0,0,0,0,0,0,0.112085143993527,2.1673383622212,0,2.43851768931522,0,0,0,0.670065061337395,0,13.4821264310493,20.9413021442817,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.082884179662,49.8299803891005,26.0415241040404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,10.1489521846434,7.64637207142375,33.0395368561014,15.4850654047563,23.4476495659131,9.72709966789076,16.2009431171434,29.345631522888,0,0.962479855263359,0,0,0,0,0,16.365508457491,22.980644415884,6.56188106444037,0.324621940274555,0.561594356226918,7.98821376616173,8.93075405906233,5.01268954180134,6.60237933426253,13.4893983087108,7.87018858045086,21.7181581222066,3.43505344755765,7.06653757909453,5.5919026973104,7.00766395190016,15.4356595367612,0,0,1.89318974933188,0,0,0,1.90460633053462,0,0,0,0,1.48482340416319,0,0.994147647766298,2.2507106625682,0,0,0,0.597743964753209,1.93398740871803,0,0,0,0,0,0,9.20830266408369,0.493217028184668,35.922463852041,0,0.969332746095218,2.87581104301739,0,0,0,0.724999575434793,0,0,0,0,0,0,2.65722415744152,2.53252521113357,1.52581736317083,0.663475559587348,1.18219047581419,1.09692698576986,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.183195186803725,1.06606955203727,5.10966490978682,0.941881538370149,2.32696354660219,0,0,0,0,0.158936578980379,0,0,0,0,0,0.442287822516696,3.05515072466813,0,0,0,4.71807930864739,0,3.51396668588009,0,0,0,1.18375320854817,1.20990716048664,0.61214552326098,8.15106877207495,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,1.01297273529406,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,4.65478288232776,0,0,0,0.279282401272254,0,0,0.599037001496973,0,1.56220020209311,0.335917362433631,0,0,0,0,0,0,0,2.38568906942791,2.58786471611994,0,0,0,17.99791132412,28.6306723186441,1.45798935979259,0,1.81253126788156,0.209818352539992,0,0,0,2.1440859791201,0,0,0,0,0,0,0.738832686744051,0,0,1.31897010310274,2.65013777824443,1.29282956361551,2.6446520348538,0,0,8.32941818028019,1.25763444079733,3.31391244277756,11.9079845234868,0,0,0,0,0,0,0,0,0,0.244052529803926,2.253436752717,0.573409195690071,5.65738162837947,3.72578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0.531459361253452,0.490696182767533,0,0,0,0.39997479170986,25.6060151265938,0,0,0,0,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,1.41696576325585,2.07524016774297,1.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| ||
|short_description=p2@LST1 | |short_description=p2@LST1 | ||
}} | }} |
Latest revision as of 22:05, 17 September 2015
Short description: | p2@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LST1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000460834_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-58 | 98 |
blood island | 1.09e-58 | 98 |
hemolymphoid system | 1.12e-53 | 108 |
bone marrow | 4.42e-50 | 76 |
bone element | 1.04e-44 | 82 |
immune system | 4.54e-44 | 93 |
skeletal element | 1.11e-38 | 90 |
skeletal system | 1.29e-33 | 100 |
adult organism | 7.27e-19 | 114 |
lateral plate mesoderm | 8.29e-18 | 203 |
neural tube | 1.02e-13 | 56 |
neural rod | 1.02e-13 | 56 |
future spinal cord | 1.02e-13 | 56 |
neural keel | 1.02e-13 | 56 |
musculoskeletal system | 6.93e-13 | 167 |
regional part of nervous system | 5.86e-12 | 53 |
regional part of brain | 5.86e-12 | 53 |
regional part of forebrain | 2.03e-10 | 41 |
forebrain | 2.03e-10 | 41 |
anterior neural tube | 2.03e-10 | 41 |
future forebrain | 2.03e-10 | 41 |
blood | 7.66e-10 | 15 |
haemolymphatic fluid | 7.66e-10 | 15 |
organism substance | 7.66e-10 | 15 |
telencephalon | 1.65e-09 | 34 |
brain grey matter | 1.67e-09 | 34 |
gray matter | 1.67e-09 | 34 |
connective tissue | 1.25e-08 | 371 |
regional part of telencephalon | 1.70e-08 | 32 |
cerebral hemisphere | 2.73e-08 | 32 |
central nervous system | 3.73e-08 | 81 |
brain | 7.48e-08 | 68 |
future brain | 7.48e-08 | 68 |
neural nucleus | 3.29e-07 | 9 |
nucleus of brain | 3.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.76e-07 | 31 |