FFCP PHASE1:Hg19::chr6:31554962..31554987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=7940 | |EntrezGene=7940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=14189 | |HGNC=14189 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q5STA5,Q5SP24,O00453,Q2HNT3 | |UniProt=Q5STA5,Q5SP24,O00453,Q2HNT3 | ||
|association_with_transcript=0bp_to_ENST00000376086,ENST00000376092,ENST00000376093,ENST00000376102,NM_001166538,NM_007161,NM_205840,uc003nus.2,uc003nut.2,uc003nuu.2,uc010jst.1,uc010jsu.1,uc010jsx.2_5end | |association_with_transcript=0bp_to_ENST00000376086,ENST00000376092,ENST00000376093,ENST00000376102,NM_001166538,NM_007161,NM_205840,uc003nus.2,uc003nut.2,uc003nuu.2,uc010jst.1,uc010jsu.1,uc010jsx.2_5end | ||
|cluster_id=chr6:31554962..31554987,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_5_at_LST1_5end | |description=CAGE_peak_5_at_LST1_5end |
Latest revision as of 22:05, 17 September 2015
Short description: | p5@LST1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LST1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000376086, ENST00000376092, ENST00000376093, ENST00000376102, NM_001166538, NM_007161, NM_205840, uc003nus.2, uc003nut.2, uc003nuu.2, uc010jst.1, uc010jsu.1, uc010jsx.2_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STA5Q5SP24O00453Q2HNT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@LST1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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myeloid cell | 1.38e-87 | 108 |
common myeloid progenitor | 1.38e-87 | 108 |
myeloid leukocyte | 2.22e-86 | 72 |
macrophage dendritic cell progenitor | 3.81e-84 | 61 |
monopoietic cell | 1.10e-81 | 59 |
monocyte | 1.10e-81 | 59 |
monoblast | 1.10e-81 | 59 |
promonocyte | 1.10e-81 | 59 |
defensive cell | 1.12e-76 | 48 |
phagocyte | 1.12e-76 | 48 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
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hematopoietic system | 2.42e-79 | 98 |
blood island | 2.42e-79 | 98 |
hemolymphoid system | 6.64e-72 | 108 |
bone marrow | 4.15e-66 | 76 |
bone element | 7.51e-60 | 82 |
immune system | 3.71e-58 | 93 |
skeletal element | 8.34e-53 | 90 |
skeletal system | 1.37e-45 | 100 |
lateral plate mesoderm | 2.18e-27 | 203 |
musculoskeletal system | 1.17e-20 | 167 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
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myeloid leukemia | 2.82e-12 | 31 |
leukemia | 7.94e-10 | 39 |
Showing 1 to 2 of 2 entries