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FFCP PHASE1:Hg19::chr6:31554962..31554987,+: Difference between revisions

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{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=7940
|EntrezGene=7940
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=14189
|HGNC=14189
|TSSclassifier=S
|TSSclassifier=strong
|UniProt=Q5STA5,Q5SP24,O00453,Q2HNT3
|UniProt=Q5STA5,Q5SP24,O00453,Q2HNT3
|association_with_transcript=0bp_to_ENST00000376086,ENST00000376092,ENST00000376093,ENST00000376102,NM_001166538,NM_007161,NM_205840,uc003nus.2,uc003nut.2,uc003nuu.2,uc010jst.1,uc010jsu.1,uc010jsx.2_5end
|association_with_transcript=0bp_to_ENST00000376086,ENST00000376092,ENST00000376093,ENST00000376102,NM_001166538,NM_007161,NM_205840,uc003nus.2,uc003nut.2,uc003nuu.2,uc010jst.1,uc010jsu.1,uc010jsx.2_5end
|cluster_id=chr6:31554962..31554987,+
|coexpression_cluster_id=C92
|coexpression_cluster_id=C92
|description=CAGE_peak_5_at_LST1_5end
|description=CAGE_peak_5_at_LST1_5end

Latest revision as of 22:05, 17 September 2015

Short description:p5@LST1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_LST1_5end
Coexpression cluster:C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole
Association with transcript: 0bp_to_ENST00000376086, ENST00000376092, ENST00000376093, ENST00000376102, NM_001166538, NM_007161, NM_205840, uc003nus.2, uc003nut.2, uc003nuu.2, uc010jst.1, uc010jsu.1, uc010jsx.2_5end
EntrezGene:LST1
HGNC: 14189
UniProt: Q5STA5Q5SP24O00453Q2HNT3
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data