FFCP PHASE1:Hg19::chr8:2970593..2970613,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=271bp_to_ENST00000520561_5end | |||
|cluster_id=chr8:2970593..2970613,- | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_9_at_CSMD1_5end | |||
|id=chr8:2970593..2970613,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.02e-11;2!CL:0000242;2.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.88e-11;2!UBERON:0009117;7.36e-09;10!UBERON:0005564;7.36e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-21!115;UBERON:0002780!1.66e-11!41;UBERON:0001890!1.66e-11!41;UBERON:0006240!1.66e-11!41;UBERON:0003080!3.56e-11!42;UBERON:0001893!6.95e-10!34;UBERON:0003135!6.18e-09!11;UBERON:0001049!7.13e-09!57;UBERON:0005068!7.13e-09!57;UBERON:0006241!7.13e-09!57;UBERON:0007135!7.13e-09!57;UBERON:0002616!1.76e-08!59;UBERON:0002791!1.89e-08!33;UBERON:0001869!4.52e-07!32;UBERON:0000349!4.79e-07!5;UBERON:0003056!6.22e-07!61;UBERON:0003075!6.54e-07!86;UBERON:0007284!6.54e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.82e-21;1!UBERON:0002134;6.98e-21;1!UBERON:0005208;6.98e-21;1!UBERON:0004145;6.98e-21;1!UBERON:0005946;6.98e-21;1!UBERON:0005965;6.98e-21;1!UBERON:0002078;6.98e-21;1!UBERON:0003135;8.12e-17;11!UBERON:0000007;2.35e-11;2!UBERON:0002081;3.89e-11;2!UBERON:0002133;3.89e-11;2!UBERON:0000473;7.67e-11;8!UBERON:0000991;3.80e-09;21!UBERON:0003101;9.81e-09;22!UBERON:0000079;9.81e-09;22!UBERON:0006947;6.13e-08;3!UBERON:0004054;6.13e-08;3!UBERON:0003978;7.50e-08;3!UBERON:0004151;7.50e-08;3!UBERON:0000946;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.45e-21,1;UBERON:0002134,6.31e-21,1;UBERON:0005208,6.31e-21,1;UBERON:0005946,6.31e-21,1;UBERON:0005965,6.31e-21,1;UBERON:0002078,6.31e-21,1;UBERON:0003135,8.80e-17,11;UBERON:0000007,2.23e-11,2;UBERON:0002081,3.70e-11,2;UBERON:0002133,3.70e-11,2;UBERON:0010227,3.70e-11,2;UBERON:0000473,8.47e-11,8;UBERON:0000991,4.08e-09,21;UBERON:0009196,4.08e-09,21;UBERON:0009117,4.08e-09,21;UBERON:0005564,4.08e-09,21;UBERON:0004176,9.94e-09,22;UBERON:0003101,1.02e-08,22;UBERON:0000079,1.02e-08,22;UBERON:0006947,5.93e-08,3;UBERON:0004054,5.93e-08,3;UBERON:0003978,7.26e-08,3;UBERON:0009751,7.26e-08,3;UBERON:0004151,7.26e-08,3;UBERON:0000946,7.26e-08,3;UBERON:0002523,7.26e-08,3;UBERON:0005983,7.26e-08,3;UBERON:0004145,7.26e-08,3;UBERON:0002165,7.26e-08,3;UBERON:0002062,7.26e-08,3;UBERON:0007280,7.26e-08,3;UBERON:0003133,6.02e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.66944122552934,0,0,0.732186172644509,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7252479402705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,1.41483874589699,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,4.34763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31764966272684,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0.672567444437648,0,3.41493287026946,0,0,0,0,0.131545547125698,0,0,0,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,2.41167717140561,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611207220914332,0,0,0.201273793591026,0 | |||
|short_description=p9@CSMD1 | |||
}} |
Latest revision as of 22:05, 17 September 2015
Short description: | p9@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CSMD1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 271bp_to_ENST00000520561_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.45e-21 | 1 |
tricuspid valve | 6.31e-21 | 1 |
right atrium valve | 6.31e-21 | 1 |
outflow tract of atrium | 6.31e-21 | 1 |
outflow part of right atrium | 6.31e-21 | 1 |
right cardiac atrium | 6.31e-21 | 1 |
male reproductive organ | 8.80e-17 | 11 |
pituitary gland | 2.23e-11 | 2 |
cardiac atrium | 3.70e-11 | 2 |
atrioventricular valve | 3.70e-11 | 2 |
future cardiac atrium | 3.70e-11 | 2 |
testis | 8.47e-11 | 8 |
gonad | 4.08e-09 | 21 |
indifferent external genitalia | 4.08e-09 | 21 |
indifferent gonad | 4.08e-09 | 21 |
gonad primordium | 4.08e-09 | 21 |
external genitalia | 9.94e-09 | 22 |
male organism | 1.02e-08 | 22 |
male reproductive system | 1.02e-08 | 22 |
male genital duct | 5.93e-08 | 3 |
internal male genitalia | 5.93e-08 | 3 |
valve | 7.26e-08 | 3 |
cardiac mesenchyme | 7.26e-08 | 3 |
cardiac chamber | 7.26e-08 | 3 |
cardial valve | 7.26e-08 | 3 |
tunica intima | 7.26e-08 | 3 |
heart layer | 7.26e-08 | 3 |
outflow tract | 7.26e-08 | 3 |
endocardium | 7.26e-08 | 3 |
endocardial cushion | 7.26e-08 | 3 |
presumptive endocardium | 7.26e-08 | 3 |
reproductive organ | 6.02e-07 | 48 |