FFCP PHASE1:Hg19::chr6:31554766..31554777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7940 | |EntrezGene=7940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14189 | |HGNC=14189 | ||
|TSSclassifier=strong | |||
|UniProt=Q5STB1 | |UniProt=Q5STB1 | ||
|association_with_transcript=-8bp_to_ENST00000396107_5end | |association_with_transcript=-8bp_to_ENST00000396107_5end | ||
|cluster_id=chr6:31554766..31554777,+ | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_8_at_LST1_5end | |description=CAGE_peak_8_at_LST1_5end | ||
|id=chr6:31554766..31554777,+ | |id=chr6:31554766..31554777,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.19e-64!172;CL:0000566!1.19e-64!172;CL:0000988!1.37e-60!182;CL:0000763!3.67e-59!112;CL:0000049!3.67e-59!112;CL:0002032!5.83e-59!165;CL:0000837!5.83e-59!165;CL:0000738!1.94e-55!140;CL:0000766!3.20e-51!76;CL:0002009!3.38e-50!65;CL:0002194!6.42e-48!63;CL:0000576!6.42e-48!63;CL:0000040!6.42e-48!63;CL:0000559!6.42e-48!63;CL:0000557!1.35e-46!71;CL:0002087!7.98e-46!119;CL:0002031!9.43e-45!124;CL:0000839!9.84e-45!70;CL:0002057!5.66e-42!42;CL:0000860!6.78e-38!45;CL:0000134!4.45e-11!358;CL:0002393!6.29e-11!9;CL:0002397!6.29e-11!9;CL:0002320!3.19e-10!365;CL:0000451!3.56e-08!10;CL:0000219!2.36e-07!390;CL:0000094!8.94e-07!8;CL:0000990!9.70e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.19e-64!172;CL:0000566!1.19e-64!172;CL:0000988!1.37e-60!182;CL:0000763!3.67e-59!112;CL:0000049!3.67e-59!112;CL:0002032!5.83e-59!165;CL:0000837!5.83e-59!165;CL:0000738!1.94e-55!140;CL:0000766!3.20e-51!76;CL:0002009!3.38e-50!65;CL:0002194!6.42e-48!63;CL:0000576!6.42e-48!63;CL:0000040!6.42e-48!63;CL:0000559!6.42e-48!63;CL:0000557!1.35e-46!71;CL:0002087!7.98e-46!119;CL:0002031!9.43e-45!124;CL:0000839!9.84e-45!70;CL:0002057!5.66e-42!42;CL:0000860!6.78e-38!45;CL:0000134!4.45e-11!358;CL:0002393!6.29e-11!9;CL:0002397!6.29e-11!9;CL:0002320!3.19e-10!365;CL:0000451!3.56e-08!10;CL:0000219!2.36e-07!390;CL:0000094!8.94e-07!8;CL:0000990!9.70e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.12e-47;39!CL:0000234;3.12e-47;39!CL:0000860;4.59e-47;33!CL:0002057;4.59e-47;33!CL:0000576;1.19e-46;48!CL:0000766;2.77e-36;69!CL:0000763;1.03e-25;100!CL:0000738;1.50e-16;136!CL:0002087;8.50e-16;104!CL:0000988;2.33e-13;177!CL:0002393;1.76e-11;6!CL:0002397;1.76e-11;6!CL:0000235;8.24e-11;6!CL:0000094;1.81e-10;8!CL:0000451;2.56e-10;10!CL:0000840;9.16e-10;5!CL:0000990;4.14e-08;8!CL:0000219;1.61e-07;193!CL:0000081;3.08e-07;11!CL:0000875;4.59e-07;3!CL:0002396;4.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.41e-90,61;CL:0000763,9.35e-90,108;CL:0000049,9.35e-90,108;CL:0000766,3.76e-88,72;CL:0002194,2.32e-86,59;CL:0000576,2.32e-86,59;CL:0000040,2.32e-86,59;CL:0000559,2.32e-86,59;CL:0000557,1.87e-80,67;CL:0000037,2.02e-78,168;CL:0000473,1.73e-77,48;CL:0000234,1.73e-77,48;CL:0000839,2.69e-75,66;CL:0000988,4.71e-73,177;CL:0002032,1.96e-71,161;CL:0000837,1.96e-71,161;CL:0000738,4.16e-70,136;CL:0000860,1.06e-67,42;CL:0002057,1.06e-67,42;CL:0002087,8.30e-60,115;CL:0002031,4.32e-55,120;CL:0000134,4.90e-23,354;CL:0002320,4.45e-22,361;CL:0000219,1.02e-18,386;CL:0002393,7.92e-17,9;CL:0002397,7.92e-17,9;CL:0000034,2.90e-15,441;CL:0000048,1.19e-14,427;CL:0000723,4.28e-14,433;CL:0000235,8.71e-11,6;CL:0000451,1.43e-10,10;CL:0000094,2.01e-10,8;CL:0000840,6.27e-10,5;CL:0001029,6.27e-10,5;CL:0000990,2.71e-08,8;CL:0000081,3.32e-07,11;CL:0000875,4.56e-07,3;CL:0002396,4.56e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-48;42!CL:0000049;1.68e-23;108 | |||
|ontology_enrichment_disease=DOID:8692!7.32e-10!31;DOID:1240!1.10e-08!39;DOID:2531!3.02e-07!51;DOID:0060083!3.02e-07!51 | |ontology_enrichment_disease=DOID:8692!7.32e-10!31;DOID:1240!1.10e-08!39;DOID:2531!3.02e-07!51;DOID:0060083!3.02e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.25e-10;31!DOID:1240;5.46e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.42e-10,31;DOID:1240,1.40e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.30e-52!102;UBERON:0003061!7.30e-52!102;UBERON:0002193!7.73e-47!112;UBERON:0002371!3.13e-41!80;UBERON:0001474!1.51e-36!86;UBERON:0004765!2.47e-28!101;UBERON:0001434!2.47e-28!101;UBERON:0002405!1.32e-27!115;UBERON:0007023!3.77e-19!115;UBERON:0003081!9.53e-14!216;UBERON:0000178!4.91e-11!15;UBERON:0000179!4.91e-11!15;UBERON:0000463!4.91e-11!15;UBERON:0002204!2.63e-10!167;UBERON:0002384!2.10e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!7.30e-52!102;UBERON:0003061!7.30e-52!102;UBERON:0002193!7.73e-47!112;UBERON:0002371!3.13e-41!80;UBERON:0001474!1.51e-36!86;UBERON:0004765!2.47e-28!101;UBERON:0001434!2.47e-28!101;UBERON:0002405!1.32e-27!115;UBERON:0007023!3.77e-19!115;UBERON:0003081!9.53e-14!216;UBERON:0000178!4.91e-11!15;UBERON:0000179!4.91e-11!15;UBERON:0000463!4.91e-11!15;UBERON:0002204!2.63e-10!167;UBERON:0002384!2.10e-09!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.14e-14;15!UBERON:0000179;6.14e-14;15!UBERON:0000463;6.14e-14;15!UBERON:0002390;1.47e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-82,98;UBERON:0003061,1.39e-82,98;UBERON:0002193,7.62e-73,108;UBERON:0002371,3.28e-71,76;UBERON:0001474,1.32e-64,82;UBERON:0002405,1.14e-58,93;UBERON:0004765,3.66e-57,90;UBERON:0001434,1.55e-49,100;UBERON:0003081,2.83e-30,203;UBERON:0002204,3.93e-23,167;UBERON:0002384,8.98e-21,371;UBERON:0000178,6.01e-14,15;UBERON:0000179,6.01e-14,15;UBERON:0000463,6.01e-14,15;UBERON:0000926,1.51e-12,315;UBERON:0004120,1.51e-12,315;UBERON:0006603,1.51e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,0.656804715599566,1.10195093839151,22.0283995035386,6.1412703695554,11.6112092487057,0,0,0,0,0.142169232487422,2.93600439334847,7.75593571944628,8.22232234627581,6.07630438004385,2.68698569087909,1.29557466407592,1.28787783817093,6.10672602874172,3.77875943688809,7.03493777444667,6.74044207026485,6.57868620834921,8.05236564327269,10.0692337312753,7.94098190240212,12.533558184095,6.89491361473237,7.10033151942209,10.8341189275473,6.58848188399116,5.45812300115692,9.88783331558372,5.81559395504715,6.09765151444578,4.47535988059329,5.93732340336089,10.3721101963249,6.81959600852311,9.28669563611469,5.10646702222026,6.22822248995575,7.28621129244555,9.90817544998383,13.031330682307,4.23779651843358,8.47038562771399,12.0255707227536,29.3644847973599,28.7015804952809,31.8681141172731,21.4547685489806,22.2261801405429,13.1794981091606,60.1376889294034,33.8158351238453,29.7742570636353,0,1.63841583378639,1.77901850772711,1.70692089026603,0.800791974072025,1.14950487990897,0,0.954053754535364,0.569212969109448,0.587237189370939,0,10.5737062863221,3.36305137788922,1.84368859342554,0,0,0,0.334372990781356,0,0,0,1.00269411196656,0,0,0,0.384273959177026,0.520237390239513,0.493313713811028,0.276350017785848,0.579606171470105,0,0,0,0.906474741580529,0,0.68725489096526,0.253019692019503,0.95569624297229,0,0,1.05402583354441,1.15187950038977,0,3.07810427657222,1.64225599384209,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,2.59637914923747,1.74129737299267,6.38198210490553,1.90792499444274,3.43196946468077,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5873312617581,6.08411089362018,8.02608276359133,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,14.5654556515317,8.43335757932127,0,0,0,0,0,0,0,0.591092280605782,0,0.641715181398742,0,0,0,0.167516265334349,0,5.99205619157746,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37596867919507,4.96142661882819,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,4.56702848308952,6.88173486428138,7.97506062043828,4.2881719582402,5.34770955012053,2.59389324477087,7.02040868409549,7.9312517629427,0,0,0,0,0,0.213425530045242,0,4.59032554295478,22.4061283054869,17.5689073660823,0,0.561594356226918,1.59764275323235,2.0368386450493,0,7.78742177887375,7.22646337966648,0.80719882876419,0.851692475380653,1.03051603426729,2.15068535015921,2.68411329470899,2.0021897005429,2.54004524022652,0,0,3.51592382018778,4.9960795199673,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0.994147647766298,1.1253553312841,0,0,0,0,0.552567831062295,0,0,0,0,0,0,5.62729607249559,0,14.3689855408164,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0.221158519862449,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,2.04386596391473,0.31396051279005,1.82832850090172,0,0,0,0,1.43042921082341,0,0,0,0,0,0.0884575645033392,1.22206028986725,0.296521128680622,0,0.104421949505455,1.55022605855557,0,0.234264445725339,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,1.77976992559591,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,22.2724152635985,30.17827622776,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.574647645245373,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0.320362237703084,0.157204305099666,2.48543433208317,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.876336514945499,0,0.665574309221114,0.558867626472451,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,1.86010776438708,0.817826971279221,0,0,0,1.59989916683944,8.10857145675471,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.41023272848151,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0.975726071789027,0.460935950223117,0,0.543757863814654,0,0,0,0.156986185701028,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.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| ||
|short_description=p8@LST1 | |short_description=p8@LST1 | ||
}} | }} |
Latest revision as of 22:04, 17 September 2015
Short description: | p8@LST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LST1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -8bp_to_ENST00000396107_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-82 | 98 |
blood island | 1.39e-82 | 98 |
hemolymphoid system | 7.62e-73 | 108 |
bone marrow | 3.28e-71 | 76 |
bone element | 1.32e-64 | 82 |
immune system | 1.14e-58 | 93 |
skeletal element | 3.66e-57 | 90 |
skeletal system | 1.55e-49 | 100 |
lateral plate mesoderm | 2.83e-30 | 203 |
musculoskeletal system | 3.93e-23 | 167 |
connective tissue | 8.98e-21 | 371 |
blood | 6.01e-14 | 15 |
haemolymphatic fluid | 6.01e-14 | 15 |
organism substance | 6.01e-14 | 15 |
mesoderm | 1.51e-12 | 315 |
mesoderm-derived structure | 1.51e-12 | 315 |
presumptive mesoderm | 1.51e-12 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.42e-10 | 31 |
leukemia | 1.40e-08 | 39 |