FFCP PHASE1:Hg19::chr15:48937982..48937988,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:48937982..48937988,-
|short_description=p9@FBN1
|description=CAGE_peak_9_at_FBN1_5end
|association_with_transcript=0bp_to_ENST00000389087,ENST00000544030,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2200 | |EntrezGene=2200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |HGNC=3603 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7L2,F5H2N7,D2JYH6,P35555 | |UniProt=F8W7L2,F5H2N7,D2JYH6,P35555 | ||
|association_with_transcript=0bp_to_ENST00000389087,ENST00000544030,NM_000138_5end | |||
|cluster_id=chr15:48937982..48937988,- | |||
|coexpression_cluster_id=C720 | |||
|description=CAGE_peak_9_at_FBN1_5end | |||
|id=chr15:48937982..48937988,- | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-27!180;CL:0000057!1.45e-22!75;CL:0000680!1.53e-14!57;CL:0000056!1.53e-14!57;CL:0000355!1.53e-14!57;CL:0000187!7.37e-13!54;CL:0002620!5.19e-12!23;CL:0000183!2.11e-11!59;CL:0002494!2.03e-10!16;CL:0000048!2.04e-10!430;CL:0000393!3.12e-10!60;CL:0000211!3.12e-10!60;CL:0000723!1.18e-09!436;CL:0000034!6.01e-09!444;CL:0000192!2.07e-07!42;CL:0000514!2.07e-07!42;CL:0000222!2.94e-07!119;CL:0002334!9.97e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.92e-11;12!CL:0002620;3.77e-11;23!CL:0000680;3.87e-08;7!CL:0002580;4.67e-08;3!CL:0002615;1.38e-07;3!CL:0002579;1.38e-07;3!CL:0000057;1.43e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.66e-19,76;CL:0000048,6.96e-15,427;CL:0000723,1.98e-14,433;CL:0000034,7.60e-14,441;CL:0002334,1.08e-11,12;CL:0002620,2.92e-11,23;CL:0000680,6.67e-09,58;CL:0000056,6.67e-09,58;CL:0000355,6.67e-09,58;CL:0002580,3.69e-08,3;CL:0000134,5.11e-08,354;CL:0002579,5.18e-08,3;CL:0002615,1.01e-07,3;CL:0002320,1.30e-07,361;CL:0000187,2.44e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.49e-12;5!DOID:450;1.49e-12;5!DOID:66;1.49e-12;5!DOID:423;1.49e-12;5!DOID:0080000;1.49e-12;5!DOID:11722;1.49e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.11e-12,5;DOID:450,1.11e-12,5;DOID:66,1.11e-12,5;DOID:423,1.11e-12,5;DOID:0080000,1.11e-12,5;DOID:11722,1.11e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.49e-15!83;UBERON:0002329!4.49e-15!83;UBERON:0003077!4.49e-15!83;UBERON:0003059!4.49e-15!83;UBERON:0007282!4.49e-15!83;UBERON:0009618!4.49e-15!83;UBERON:0007285!4.49e-15!83;UBERON:0002385!8.36e-15!63;UBERON:0001015!8.36e-15!63;UBERON:0000383!8.36e-15!63;UBERON:0001134!3.03e-14!61;UBERON:0002036!3.03e-14!61;UBERON:0003082!3.03e-14!61;UBERON:0004290!4.36e-13!70;UBERON:0000486!3.09e-11!82;UBERON:0004872!3.18e-10!84;UBERON:0007100!6.18e-09!27;UBERON:0000948!7.42e-09!24;UBERON:0005498!7.42e-09!24;UBERON:0004140!7.42e-09!24;UBERON:0009881!7.42e-09!24;UBERON:0004141!7.42e-09!24;UBERON:0003084!7.42e-09!24;UBERON:0007005!7.42e-09!24;UBERON:0004139!7.42e-09!24;UBERON:0004291!7.42e-09!24;UBERON:0000475!9.60e-08!365;UBERON:0005256!1.06e-07!143;UBERON:0004457!1.06e-07!12;UBERON:0000042!1.06e-07!12;UBERON:0002199!2.52e-07!45;UBERON:0002416!2.52e-07!45;UBERON:0004923!5.26e-07!57;UBERON:0004573!5.87e-07!33;UBERON:0004571!5.87e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.12e-15;9!UBERON:0000042;1.12e-15;9!UBERON:0003688;1.65e-13;6!UBERON:0002358;1.65e-13;6!UBERON:0003684;1.65e-13;6!UBERON:0001178;1.65e-13;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.63e-14,6;UBERON:0002358,4.63e-14,6;UBERON:0003684,4.63e-14,6;UBERON:0001178,4.63e-14,6;UBERON:0004457,5.97e-12,12;UBERON:0000042,5.97e-12,12;UBERON:0001134,4.32e-09,62;UBERON:0002036,4.32e-09,62;UBERON:0003082,4.32e-09,62;UBERON:0002385,1.15e-08,64;UBERON:0001015,1.15e-08,64;UBERON:0000383,1.15e-08,64;UBERON:0007524,5.45e-08,73;UBERON:0002384,1.40e-07,371;UBERON:0000486,2.02e-07,83;UBERON:0002329,2.27e-07,71;UBERON:0003059,2.27e-07,71;UBERON:0007282,2.27e-07,71;UBERON:0004290,2.27e-07,71;UBERON:0009618,2.27e-07,71;UBERON:0003077,3.31e-07,72;UBERON:0007285,3.31e-07,72 | |||
|phase1_expression=0.363356758541113,0.428201047781966,1.69145284915165,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.791300934685361,0.247532705920093,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.511450247374121,0.722878304769133,0,1.30361867064741,0,1.94653948121054,1.03988298880475,0.443458794925128,1.05401742831751,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.357198913136319,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.633152558322899,1.85372853138506,12.0471380714502,2.12801029319014,1.12135520028461,1.06748995729705,0.49333509683432,0.622422070799533,0.538842688278752,0.980771418680752,0.302714855289863,1.15235184896,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.647491777472526,0.280901613404497,0.204154171254893,0,0.309977343527296,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.625592599359821,0,1.31693286264251,0.612975591598039,1.05166641234618,0.340296549480063,3.7671823494661,1.49490172172997,1.69545520927649,5.70173082560364,1.13357782162283,2.83404594050192,0.744467425326359,3.88185564154912,0.974370051611986,4.03894038790583,1.74894807420369,0.323292113637624,4.9701342952326,0.806016785821122,0.508681776931463,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,1.76113041353732,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.285955987316295,2.17048642156577,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,1.19812427745791,0,1.42636905040718,1.59259437334337,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.207970861530807,1.24900292158013,0.630809660135739,1.40569697991256,1.20378439891088,0,0,1.32845119707087,0.368738337083406,0.434418072340414,0,0,0,0,0,0.303127571446259,0,0.604780586659361,1.24053903909388,3.37616341233737,1.68396056659844,1.79394808957981,1.53512174720011,1.28683136914886,0,0.925258162815933,1.24293207719189,1.23190734020714,0,0.464841513839837,0,0,0,0.68888668898764,0.182091168006717,0.655622074797121,0,0.15403067420883,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.412164046590889,0,0,0,0,0,0.193341436584244,0.770243085573222,0.460511024178389,0.275673144969061,0.859361958946189,1.16013355131383,1.02271952899321,0.801288320820636,0,0,0.127612712494584,0,0,4.40737285562896,2.0911118104818,4.31247012246524,0,0,0.55597265731176,0.286249773483982,0,0.316379424718726,1.71567174531442,0.255897791311334,1.71175595213568,0.636406495851874,0,0.899362287916574,1.64722217841633,0.235624804691373,0.202182481573316,1.58510321173008,1.26377536871694,0.975267478179181,1.21856744815642,0,1.09199929126389,1.1312434556297,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0,0.430234056612155,0.589494246078727,0,0.354761064070598,1.89996871767898,2.30506425071931,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,3.81991175580304,0.890894042497916,4.91457123358771,0,0,0,0,0,0.996239941255349,0,0,0.102268682502155,0,0.933118762985422,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0.797594390929008,0,0,0,2.55200927785536,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.543616824294456,0.941425616810999,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0.429226048136571,0.446342914883745,0.470284307407084,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0.179287339332845,0,0,0.662091970365432,0.25426853765475,0,0,0.979762080328227,0,0.082092520749339,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0,1.31149052283922,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,1.04478362020812,0.934853239388898,1.10961172300523,0.378806010550178,2.26411111577318,1.77962244319307,0.915360273587694,0.756154618816195,0.6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| ||
|short_description=p9@FBN1 | |||
}} | }} |
Latest revision as of 22:04, 17 September 2015
Short description: | p9@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FBN1_5end |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000389087, ENST00000544030, NM_000138_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | F8W7L2F5H2N7D2JYH6P35555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.66e-19 | 76 |
multi fate stem cell | 6.96e-15 | 427 |
somatic stem cell | 1.98e-14 | 433 |
stem cell | 7.60e-14 | 441 |
preadipocyte | 1.08e-11 | 12 |
skin fibroblast | 2.92e-11 | 23 |
muscle precursor cell | 6.67e-09 | 58 |
myoblast | 6.67e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.67e-09 | 58 |
preadipocyte of the breast | 3.69e-08 | 3 |
mesenchymal cell | 5.11e-08 | 354 |
omentum preadipocyte | 5.18e-08 | 3 |
adipocyte of omentum tissue | 1.01e-07 | 3 |
connective tissue cell | 1.30e-07 | 361 |
muscle cell | 2.44e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.63e-14 | 6 |
peritoneum | 4.63e-14 | 6 |
abdominal cavity | 4.63e-14 | 6 |
visceral peritoneum | 4.63e-14 | 6 |
cavity lining | 5.97e-12 | 12 |
serous membrane | 5.97e-12 | 12 |
skeletal muscle tissue | 4.32e-09 | 62 |
striated muscle tissue | 4.32e-09 | 62 |
myotome | 4.32e-09 | 62 |
muscle tissue | 1.15e-08 | 64 |
musculature | 1.15e-08 | 64 |
musculature of body | 1.15e-08 | 64 |
dense mesenchyme tissue | 5.45e-08 | 73 |
connective tissue | 1.40e-07 | 371 |
multilaminar epithelium | 2.02e-07 | 83 |
somite | 2.27e-07 | 71 |
presomitic mesoderm | 2.27e-07 | 71 |
presumptive segmental plate | 2.27e-07 | 71 |
dermomyotome | 2.27e-07 | 71 |
trunk paraxial mesoderm | 2.27e-07 | 71 |
paraxial mesoderm | 3.31e-07 | 72 |
presumptive paraxial mesoderm | 3.31e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.11e-12 | 5 |
myotonic disease | 1.11e-12 | 5 |
muscle tissue disease | 1.11e-12 | 5 |
myopathy | 1.11e-12 | 5 |
muscular disease | 1.11e-12 | 5 |
myotonic dystrophy | 1.11e-12 | 5 |