FFCP PHASE1:Hg19::chr1:158975744..158975769,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426592_5end | |association_with_transcript=0bp_to_ENST00000426592_5end | ||
|cluster_id=chr1:158975744..158975769,+ | |||
|description=CAGE_peak_10_at_IFI16_5end | |description=CAGE_peak_10_at_IFI16_5end | ||
|id=chr1:158975744..158975769,+ | |id=chr1:158975744..158975769,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.57e-07;7!CL:0000586;1.57e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.96e-07,7;CL:0000586,1.96e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.31e-14;10!UBERON:0005564;2.31e-14;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;3.13e-10;22!DOID:2994;3.13e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.78e-10,22;DOID:2994,3.78e-10,22;DOID:4074,6.30e-07,2;DOID:4905,6.30e-07,2;DOID:3498,6.30e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-20!115;UBERON:0000073!3.47e-08!94;UBERON:0001016!3.47e-08!94;UBERON:0001017!4.18e-07!82;UBERON:0003075!5.44e-07!86;UBERON:0007284!5.44e-07!86;UBERON:0002346!7.97e-07!90;UBERON:0005743!9.12e-07!86;UBERON:0001049!9.17e-07!57;UBERON:0005068!9.17e-07!57;UBERON:0006241!9.17e-07!57;UBERON:0007135!9.17e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!2.88e-20!115;UBERON:0000073!3.47e-08!94;UBERON:0001016!3.47e-08!94;UBERON:0001017!4.18e-07!82;UBERON:0003075!5.44e-07!86;UBERON:0007284!5.44e-07!86;UBERON:0002346!7.97e-07!90;UBERON:0005743!9.12e-07!86;UBERON:0001049!9.17e-07!57;UBERON:0005068!9.17e-07!57;UBERON:0006241!9.17e-07!57;UBERON:0007135!9.17e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.78e-11;49!UBERON:0000473;1.14e-09;8!UBERON:0003135;1.35e-09;11!UBERON:0002133;1.22e-07;2!UBERON:0003127;1.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.83e-09,8;UBERON:0003135,1.86e-09,11;UBERON:0002133,1.16e-07,2;UBERON:0003127,2.07e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0.447830948479849,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0.512321413058201,0.47296445977717,0,0,0,0,0,0,0,0,0,0.659702600373432,0.997318288108159,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,0.383587685530591,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,9.08732702233113,13.5821195093428,15.1572074991506,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,31.4323145753764,0.134710672069688,8.66348086501331,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0.323292113637624,0,0,0,0,0,0,0.487894824518382,0.795178609928912,1.2781333715647,0.518305275076852,1.00928340350251,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,1.77236972004421,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0.63497894292169,0,0,1.71072446022705,0.102827492703324,0,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,1.84267891867784,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.232420756919918,0,0,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0.712256285173899,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,1.90921948755562,0,0.359744915166629,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,11.1481905075431,0,0,0,0,0,1.2700414963433,0.649243880549111,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,2.48655523978033,0,0,0,0,0,0,0,0.591860433821602,0,0,0.969332746095218,1.39152147242777,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,1.77148277162768,0.120596438625408,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,2.07564790076435,1.60633120630454,2.08843899010911,0.539209063845416,1.60515529459758,0.937057782901357,0.91227394607833,1.56531695145672,1.94224303627274,0,0,0.30607276163049,0.252746318513952,0.751617097072463,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0.0730893170861856,0,0.678923115418936,16.8569201980765,0.677942222341597,0,0.596143835108969,1.01297273529406,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,6.98206003180636,0.687481272035051,4.30723814746088,0.199679000498991,0.858452096273142,0.223171457441873,1.14211903227435,0,0,0,0,0,0,0,0.795229689809303,0,1.44677833618517,0.275078873194468,0,0,0,0.485996453264197,0,0.0788057072991982,0.262272940674991,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.574647645245373,0,8.72503104704968,0,0,0,0.39669780522807,0,0,0.106787412567695,2.51526888159466,2.89967338743037,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,1.14681839138014,0.110929051536852,0.620964029413834,0,0,50.0442087887438,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11577485214607,12.5076781220151,0,0.436838552768056,0,0,1.36329340684902,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.159633859057151,0,0,0.207471757392654,0,0,0,3.89300087047543,0,0,0,0.690359926060101,0,1.27857558193737,0,0,0,0,0.295712172434091,0.607838261565552,0.781078098613847,0,0.443910671357348,0,0,0.992422356778588,0,1.40538670403555,0,0,0,0.227662191351298,2.04015451374069,0.115233987555779,1.54339208493677,1.22345519358297,0.131545547125698,0,0,0.235479278551542,0.942693539496011,0,6.39211104356647,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,2.01164401241961,1.95990830946063,0,0.22910686854405,0,0,0,0,0,0,0.513314034281235,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0.469919589899268,0.580120991762195,0,0.178553938605658,0,0,0,0,0.430018749454354,0,0.407948941145488,0,0.5290268405154,0,0.462175628631418,0,2.3971620718665,20.5419275291748,0.126698501011437,4.28353084916323,1.06886962106224,3.6757959813938,20.05660314339,1.06090177505535,0.267964130156178,0,0.413731983447581,0.426467963801962,2.85677317756488,0.0645889098360061,0.248298857183432,0,0.445530107947154,0,0.653150243690884,2.73786640868225,0.202056159043763,2.07994395638761,4.65724499164419,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0.447830948479849,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0.512321413058201,0.47296445977717,0,0,0,0,0,0,0,0,0,0.659702600373432,0.997318288108159,0.852449501065388,0,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,0.383587685530591,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,9.08732702233113,13.5821195093428,15.1572074991506,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,31.4323145753764,0.134710672069688,8.66348086501331,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0.323292113637624,0,0,0,0,0,0,0.487894824518382,0.795178609928912,1.2781333715647,0.518305275076852,1.00928340350251,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,1.77236972004421,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0.63497894292169,0,0,1.71072446022705,0.102827492703324,0,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,1.84267891867784,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.532685175939381,0.164254312027618,0,0.232420756919918,0,0,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0.170453254832202,0.712256285173899,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,1.90921948755562,0,0.359744915166629,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,11.1481905075431,0,0,0,0,0,1.2700414963433,0.649243880549111,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,2.48655523978033,0,0,0,0,0,0,0,0.591860433821602,0,0,0.969332746095218,1.39152147242777,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,1.77148277162768,0.120596438625408,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,2.07564790076435,1.60633120630454,2.08843899010911,0.539209063845416,1.60515529459758,0.937057782901357,0.91227394607833,1.56531695145672,1.94224303627274,0,0,0.30607276163049,0.252746318513952,0.751617097072463,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0.0730893170861856,0,0.678923115418936,16.8569201980765,0.677942222341597,0,0.596143835108969,1.01297273529406,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,6.98206003180636,0.687481272035051,4.30723814746088,0.199679000498991,0.858452096273142,0.223171457441873,1.14211903227435,0,0,0,0,0,0,0,0.795229689809303,0,1.44677833618517,0.275078873194468,0,0,0,0.485996453264197,0,0.0788057072991982,0.262272940674991,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.574647645245373,0,8.72503104704968,0,0,0,0.39669780522807,0,0,0.106787412567695,2.51526888159466,2.89967338743037,0,0,0,0,0,0.7520696820681,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,1.14681839138014,0.110929051536852,0.620964029413834,0,0,50.0442087887438,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11577485214607,12.5076781220151,0,0.436838552768056,0,0,1.36329340684902,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.159633859057151,0,0,0.207471757392654,0,0,0,3.89300087047543,0,0,0,0.690359926060101,0,1.27857558193737,0,0,0,0,0.295712172434091,0.607838261565552,0.781078098613847,0,0.443910671357348,0,0,0.992422356778588,0,1.40538670403555,0,0,0,0.227662191351298,2.04015451374069,0.115233987555779,1.54339208493677,1.22345519358297,0.131545547125698,0,0,0.235479278551542,0.942693539496011,0,6.39211104356647,0,0,0.214429632529969,0,0,0,0,0,0.17071847709395,0,0,2.01164401241961,1.95990830946063,0,0.22910686854405,0,0,0,0,0,0,0.513314034281235,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0.469919589899268,0.580120991762195,0,0.178553938605658,0,0,0,0,0.430018749454354,0,0.407948941145488,0,0.5290268405154,0,0.462175628631418,0,2.3971620718665,20.5419275291748,0.126698501011437,4.28353084916323,1.06886962106224,3.6757959813938,20.05660314339,1.06090177505535,0.267964130156178,0,0.413731983447581,0.426467963801962,2.85677317756488,0.0645889098360061,0.248298857183432,0,0.445530107947154,0,0.653150243690884,2.73786640868225,0.202056159043763,2.07994395638761,4.65724499164419,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p10@IFI16 | |short_description=p10@IFI16 | ||
}} | }} |
Latest revision as of 21:51, 17 September 2015
Short description: | p10@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IFI16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000426592_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.96e-07 | 7 |
germ cell | 1.96e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.83e-09 | 8 |
male reproductive organ | 1.86e-09 | 11 |
atrioventricular valve | 1.16e-07 | 2 |
open tracheal system trachea | 2.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.78e-10 | 22 |
germ cell cancer | 3.78e-10 | 22 |
pancreas adenocarcinoma | 6.30e-07 | 2 |
pancreatic carcinoma | 6.30e-07 | 2 |
pancreatic ductal adenocarcinoma | 6.30e-07 | 2 |